Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq243752 143 5e-29 seq219765 127 4e-24 seq37740 109 1e-18 >seq243752 Length=40230 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 |||||||| || || | |||||||| | || | ||||| ||| || |||||||| Sbjct 7601 CCACCTCTCAGACGAAGGACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCTGAC 7660 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 |||| || | || || | |||||||||||||||||| | | |||||| || ||||| Sbjct 7661 AAAGTGCGGCCATCTTCAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGTGGA 7720 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 ||||||||||||||||| |||||| ||| ||||| || || ||||| | || || Sbjct 7721 ATTCCTTCTTTATCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCTGAGGGCTCAACC 7780 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || |||||||| || ||||| | || || | || |||||||| Sbjct 7781 TCAAGTGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 7827 Score = 111 bits (122), Expect = 3e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | || || |||| || | ||||| ||| || |||||| Sbjct 7826 ATACCACCTCTCAGACGAAGGACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCT 7885 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | || | || || | |||||| |||||||| || | | ||| || || || Sbjct 7886 GACAATGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGA 7945 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| ||||| |||||| ||| ||||| || || ||||| | || Sbjct 7946 GGAATTCCTTCTTTGTCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCTGATGGCTCA 8005 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGT 172045 || || || |||||||| || ||||| Sbjct 8006 ACCTCAAGTGTAATGGTCTTGCCAGT 8031 >seq219765 Length=875325 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| ||||| || || | || || || | ||| | ||||| ||| || |||||| Sbjct 73342 ATACCTCCTCTTAGACGAAGGACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATCT 73401 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || |||| || | || || | |||||| ||||||||||| | | |||||| || || Sbjct 73402 GACAAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGA 73461 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| ||||| || ||||| || |||||||| | ||| Sbjct 73462 GGAATGCCTTCTTTGTCTTGAATTTTTGCCTTGACATTTTCAATGGTATCTGATGGTTCA 73521 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || ||||| ||||| ||||| ||||| | || || | || |||||||| Sbjct 73522 ACCTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTGACAAAAATCTGCAT 73571 >seq37740 Length=474 Score = 109 bits (120), Expect = 1e-18 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || | |||||| || ||||| || | | ||| || || ||||| ||||||||||| Sbjct 151 TCTTCAAGTTGTTTCCCTGCAAAGATGAGCCGCTGCTGATCTGGTGGGATTCCTTCTTTG 210 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| || ||| || ||||| || ||||| || | ||||||||| | |||||| Sbjct 211 TCTTGAATCTTAGCCTTCACATTCTCAATCGTATCAGAGGCTTCTACTTCCAAAGTAATA 270 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| ||||| |||||||| | ||| || ||||| Sbjct 271 GTTTTTCCAGTCAATGTTTTCACGAAAATTTGCAT 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 901386462805800