Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq101527 149 2e-30 seq48604 95.1 4e-14 >seq101527 Length=647993 Score = 149 bits (164), Expect = 2e-30 Identities = 352/519 (68%), Gaps = 12/519 (2%) Strand=Plus/Minus Query 288844 ACCCTCCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTT 288903 ||| | |||||||| | ||| | | |||||| || ||||| | || || | ||| Sbjct 371006 ACCTTTCTATCAAAACGACCTGGTCTTAATAATGCGGGATCTAAAACTTCTGCGCGATTT 370947 Query 288904 GTTGCTGCCAATACAACAATAG-ATTCGGTTTGCTTAAATCCATCCATACTTGTTAA-AA 288961 ||||| |||| ||||| || | | | | |||||||| |||| | | || || Sbjct 370946 GTTGCAGCCATAACAACTATTCCACTAGAAGTA-TTAAATCCGTCCA-ATTCAACAAGAA 370889 Query 288962 TTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCC 289021 |||| || | |||||||| |||||||| ||| || | || ||| ||| ||| Sbjct 370888 TTTGGTTTAAAGTTTGTTCTCTTTCATCGTTTCCGCCACCG--AT-ACC--AATTCCTC- 370835 Query 289022 tttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCG 289081 | || |||||||||||||||||| |||| |||||| | ||| ||||| ||| | | Sbjct 370834 TACTTCGACCAACAGCATCAATTTCATCAAAGAAAATTATACAAGGAGACATTTTACGAG 370775 Query 289082 CAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATT 289141 | || |||||| |||||||| | || ||||| | ||| ||| ||||||||||||| | Sbjct 370774 CCGTTTTAAATAAATCTCTTACTCTTGAAGCTCCTAAACCTACAAACATTTCTACAAAAT 370715 Query 289142 CAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAA 289201 | || | ||||| || ||| | |||||| ||||| || || || || | || | | Sbjct 370714 CTGATCCTGATACCGAAAAGAAAGGTACATTCGCTTCACCAGCAACAGCTTTAGCTAATA 370655 Query 289202 GTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCA 289260 ||| || || ||||||| || || | || | ||||| |||| | | | |||| Sbjct 370654 ATGTTTTTCCAGTTCCAGCGGGACCTACCAACAATACTCCGCGCGGTAATCTAACACCCA 370595 Query 289261 GCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTT 289320 | | ||| |||||||||| |||||||| |||||||| | ||||| | || Sbjct 370594 TC-GCATTAAATTTCTCAGGAGATGTTAAAAATGACACAATTTCTTGTAGTTCTTCCTTC 370536 Query 289321 GCCTCATCACATCCTGCTACATCAGCAAAAGTAATATTA 289359 | || | | | || || |||||| ||| || | |||| Sbjct 370535 TCTTCTTTATAACCAGCAACATCATTAAATGTTAAATTA 370497 >seq48604 Length=384894 Score = 95.1 bits (104), Expect = 4e-14 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 ||||||| | || || |||||||||||||| ||||| ||||||| ||||||||||| Sbjct 197488 ACCAGTTTCTGCAGTCTTGACAGCTGTATCAATAAGACCTTCACGACCTCCCATAGCATG 197429 Query 302667 GAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCG 302725 |||| | | ||| || ||| || || | | | | ||| |||| || ||||| | | Sbjct 197428 GAAGTAGAACTCAGAAGG-CGTCAGACCGGCTAGATAAGAGTTCTCCACAAAACCTCTGG 197370 Query 302726 CCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGT-TCTCATAGCCGTAT 302784 ||| || || || ||| | || || || || || | | ||| | | || || Sbjct 197369 ACTCAGGACCATAATCATCTTTGATGAAATGAGGTAGTGTGCGATATCT-AAAACCAAAT 197311 Query 302785 GGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTG 302834 |||||||| ||||| |||||||||||||| |||| || | ||| | ||| Sbjct 197310 GGGATACGTTTTCCTTCAACGTTCTGCTGACCCACACAAGCAATGACCTG 197261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1465568151624137