Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq101527 96.9 5e-15 >seq101527 Length=647993 Score = 96.9 bits (106), Expect = 5e-15 Identities = 192/281 (68%), Gaps = 10/281 (4%) Strand=Plus/Plus Query 180735 ATATGGCTCTTCCACCATGTCACTGTTTGGTACAATTTTATGTTAGAAATAAAATTTATT 180794 ||||| | | || || ||||||| ||| | ||||||||||| | | | |||| Sbjct 535259 ATATGCTTTTACCTCCTTGTCACTCTTTAATGCAATTTTATGTCACTGACGATGGATATT 535318 Query 180795 TAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATAATATTG 180854 || |||| ||| | |||||| | || |||| | |||||| | || | ||||||| Sbjct 535319 TAAATTGTCAACTATATCAACGTAGTGGAGATATCTTTTTAGGTATTCCTTTCAATATTG 535378 Query 180855 CTTTCTATTCATTTTT--GGTATGTGTTCTCT--CA-AAGTGGTGCAATTTAACCCCTGG 180909 ||| ||||| || || ||| || || || || || ||| | ||| ||||| Sbjct 535379 CTTCATATTCCTTATTAACATATATGGTCGCTGCCATAACTGG-----TCTAAAACCTGG 535433 Query 180910 AAAATTTATTCACACTTTTGGGGATGTTCATGTATATTCTAACCATATTGACCAATTAAA 180969 | || ||||| ||||||||| |||| ||||||| || ||| |||||||| | || Sbjct 535434 TACTTTCATTCATGTAATTGGGGATGCTCATATATATTCAAATCATGTTGACCAAATTAA 535493 Query 180970 AATTCAATTAAGCAGAAACCCTTACAAGTTTCCAAAAGTAA 181010 ||||||||| |||| || || || || |||||| ||| Sbjct 535494 TCTTCAATTAACAAGAACACCATATAAATTGCCAAAATTAA 535534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652565494409000