Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq46638 255 2e-62 seq101527 105 2e-17 >seq46638 Length=11848 Score = 255 bits (282), Expect = 2e-62 Identities = 319/435 (73%), Gaps = 2/435 (0%) Strand=Plus/Plus Query 188752 ATCAAAAAATCTAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCT 188811 || |||||||||||||| || ||||||| || || || | || ||||| ||| |||| Sbjct 2702 ATAAAAAAATCTAATGTACTGCTAGTTGGACCAACAGGATGTGGAAAAACTTTACTTGCA 2761 Query 188812 CAAACATTGGCTGATATGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACA 188871 |||||||| | | | ||| |||| ||| | || ||| | || ||||| ||| |||| Sbjct 2762 CAAACATTATCAAAGCTTTTAGATGTGCCTTTTGCAATCGCAGACGCAACATCTCTAACC 2821 Query 188872 GAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATCCAAGCAGCT 188931 ||| | || || ||||| || |||||||||| || | || | ||| | || ||| | Sbjct 2822 GAATCAGGATACGTAGGAGATGATGTGGAAACGATAATACTAAGATTACTGCACGCAAGT 2881 Query 188932 GATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAAATT 188991 | | | || || ||||| ||| |||||| ||||||| |||||| | |||||||| Sbjct 2882 GGCAATAAAATAGAGTTAGCAGAAACTGGAATAATATATATTGATGAAATTGATAAAATA 2941 Query 188992 GCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAA 189051 | ||| |||| ||| |||| ||||| ||||||| || || ||||| ||||||||| Sbjct 2942 ATCCGTAAAACAGATAGCCCATCAATTACAAGAGATGTTTCAGGAGAAGGGGTACAGCAA 3001 Query 189052 GCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAA 189111 || ||||||||||| || ||||| ||| | || | || || || || ||| | | ||| Sbjct 3002 GCATTATTAAAAATAATAGAAGGCACAATAGCATATGTACCACCACAGGGTAGCAGAAAA 3061 Query 189112 CACCCTCACCAAGAAATGCTT-GAAATAGATACAACTAATATCTTGTTTATTCTTGGTGG 189170 ||||| || |||| ||||||| ||||| | ||| | ||||| |||||||| ||||||| Sbjct 3062 CACCCACAACAAG-AATGCTTCAAAATAAACACATCAAATATATTGTTTATCGTTGGTGG 3120 Query 189171 AGCGTTTGATGGTCT 189185 || ||||| || || Sbjct 3121 TGCCTTTGAGGGGCT 3135 >seq101527 Length=647993 Score = 105 bits (116), Expect = 2e-17 Identities = 206/299 (69%), Gaps = 8/299 (3%) Strand=Plus/Minus Query 181043 ATATGATAAAATTATTTTCATGTGTGATGCTGATGTCGATGGTTCTCATATTGAAGCACT 181102 |||| ||||||||||| | ||| |||||||| || ||||||||||||||| | | | Sbjct 359671 ATATCATAAAATTATTATTATGACGGATGCTGACGTAGATGGTTCTCATATTAGAACCTT 359612 Query 181103 ACTACTAACGTTATTCTATAATTATATGAGACCATTAATTGAAAAAGGGCATGTATATGC 181162 | | | || || || | || ||||||| ||| ||| ||||||| || |||| ||| Sbjct 359611 ATTGTTGACTTTCTTTTTTAGATATATGAAACCTTTAGTTGAAAATGGTTATGTTTATTT 359552 Query 181163 GGCTCAGCCACCATTATATCGAGTAGTTAA-AAAGAACGAATCAATTTACCTTAAAGATG 181221 || || ||||| |||||| | ||| || ||| ||| ||| | || || | ||| Sbjct 359551 AGCACAACCACCTTTATATAAATTAGAAAACAAAAAACAAAT-TTTATATTTTTATAATG 359493 Query 181222 ATCATGAGTTAAAAGAGTATACT-AAGAAA--CATCCAAACG---CTGAAGTTCAACGCT 181275 || |||| |||| | ||| | |||||| || |||| | | | ||||| | | Sbjct 359492 ATAATGAACTAAATAAATATCGTGAAGAAAATGATACAAAAGGTTTTTCAATTCAAAGAT 359433 Query 181276 TCAAAGGTCTTGGTGAAATGAACGCAGATCAACTTTGGGAAACAACAATGGATCCAAAA 181334 ||||| | || |||||||| | | ||| | || ||||| |||||| ||||| || Sbjct 359432 ATAAAGGATTAGGAGAAATGAATCCTCAACAATTATGAGAAACTACAATGAATCCAGAA 359374 Score = 91.5 bits (100), Expect = 5e-13 Identities = 155/219 (71%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 179568 TTAGAAGGTTTAGAAGCCGTACGAAAAAGACCAGGTATGTACATTGGTACCACAACACAG 179627 ||||||||||||||||| ||||| ||| | ||||||||||| || |||| ||| | || Sbjct 361098 TTAGAAGGTTTAGAAGCTGTACGTAAACGTCCAGGTATGTATATAGGTAACACTAATGAG 361039 Query 179628 AAGGGTGTAAC-TCATCTTGTTTGGGAAGCAGCAGACAATTCTATTGATGAATCAGTTGC 179686 || ||| || | ||| | ||||| ||| ||| |||||||| |||||| | | || Sbjct 361038 AAAGGT-TATCACCATTTAGTTTGAGAAATTTTAGATAATTCTATAGATGAAGCTTTAGC 360980 Query 179687 TGGTTTCGGTAGTGAAGT--ATGGATCAG-TGTAGAAACTGATGGTACTACAACTATTAA 179743 ||| || ||| |||| | || | ||| | | ||| | | | | | | |||| | Sbjct 360979 TGGATTTTGTAATGAAATTAATATAACAGTTACAAAAAATAACGAAATT---ATTATTGA 360923 Query 179744 AGATAAAGGGCGTGGTATTCCAGTTGGGCCACATCCTAA 179782 |||||| ||||| || ||||| || | ||||||||| Sbjct 360922 AGATAATGGGCGCGGGATTCCTGTAGATATACATCCTAA 360884 Score = 89.7 bits (98), Expect = 2e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 241381 AGTGCTGCAGGTTCGTTAGTATCTTATGCAATTGGTATTACGAATGTTGACCCAATTAAA 241440 ||||| || ||||| |||||||| ||| |||| ||||| |||||||||||||||||| Sbjct 493498 AGTGCGGCTGGTTCATTAGTATCATATTGTCTTGGAATTACAAATGTTGACCCAATTAAA 493557 Query 241441 TATGGTTTATTATTTGAACGTTTCTTAAATCC 241472 || |||| | |||||||| || |||||||| Sbjct 493558 TACAATTTAATTTTTGAACGATTTTTAAATCC 493589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1585151028550848