Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq219765 188 1e-42 seq243752 170 4e-37 seq37740 167 5e-36 seq129645 98.7 2e-15 seq642 89.7 1e-12 seq316807 86.0 1e-11 seq324 84.2 4e-11 >seq219765 Length=875325 Score = 188 bits (208), Expect = 1e-42 Identities = 179/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||||||||| | ||| || || ||||||||||| ||||||||||| || || ||||| | Sbjct 73115 TACCTCCTCTTAGACGAAGGACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATCTG 73174 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | | | || ||||| |||||||| ||||||||||| || | ||||||||||||| Sbjct 73175 ACAAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAG 73234 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| || ||||| || || ||||| ||||||||||| || || || || | Sbjct 73235 GAATGCCTTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCAA 73294 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | || || ||||||||||| | || ||||| || |||||||| Sbjct 73295 CTTCAAGTGTAATGGTCTTGCCTGTGAGTGTTTTTACGAAGATCTGCAT 73343 Score = 183 bits (202), Expect = 6e-41 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||||||||| | ||| || || ||||||||||| ||||||||||| || || ||||| | Sbjct 73343 TACCTCCTCTTAGACGAAGGACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATCTG 73402 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | | | || ||||| |||||||| |||||||| || || | ||||||||||||| Sbjct 73403 ACAAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGAG 73462 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| || |||||||| ||||| || ||||||||||| ||||| ||||| | Sbjct 73463 GAATGCCTTCTTTGTCTTGAATTTTTGCCTTGACATTTTCAATGGTATCTGATGGTTCAA 73522 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || || || || || || | ||||| ||||| |||||||| Sbjct 73523 CCTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTGACAAAAATCTGCAT 73571 Score = 167 bits (184), Expect = 5e-36 Identities = 168/217 (77%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || ||||| ||||| || ||||||||||| || ||||||||||| | ||| || Sbjct 72899 ACGAAGCACTAAATGCAGGGTTGATTCTTTCTGAATGTTATAATCAGACAAGGTTCGGCC 72958 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| |||||||| ||||||||||| || | |||||||||||||| || ||||| || Sbjct 72959 ATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTT 73018 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||||| || || ||||| ||||| ||||| || || || || ||||| | || || Sbjct 73019 GTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAAT 73078 Query 82775 CGTCTTGCC-TGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| ||| | || ||||| || |||||||| Sbjct 73079 GGTCTTGCCTTGTGAGTGTTTTTACGAAGATCTGCAT 73115 >seq243752 Length=40230 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||||| ||| || ||||| ||||| || ||||||||||| || || ||||| || Sbjct 7601 CCACCTCTCAGACGAAGGACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCTGAC 7660 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | | || ||||| |||||||| |||||||| || || | ||||||||||| || Sbjct 7661 AAAGTGCGGCCATCTTCAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGTGGA 7720 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 |||||||| |||||||| || || ||||| ||||| ||||| || || || || || Sbjct 7721 ATTCCTTCTTTATCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCTGAGGGCTCAACC 7780 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || |||||||| || | ||||| ||||| |||||||| Sbjct 7781 TCAAGTGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 7827 Score = 145 bits (160), Expect = 1e-29 Identities = 155/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||||| ||| || || ||||| || || ||||||||||| || || ||||| | Sbjct 7827 TACCACCTCTCAGACGAAGGACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCTG 7886 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | | || ||||| |||||||| ||||||||||| || | || |||||||||| Sbjct 7887 ACAATGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGAG 7946 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | |||||||| || ||||| || || ||||| ||||| ||||| || || || || | Sbjct 7947 GAATTCCTTCTTTGTCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCTGATGGCTCAA 8006 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGT 82786 | || | || || |||||||| || Sbjct 8007 CCTCAAGTGTAATGGTCTTGCCAGT 8031 >seq37740 Length=474 Score = 167 bits (184), Expect = 5e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||| || |||| || ||||| ||||| || || || || || || || Sbjct 79 CCTCCACGAAGACGGAGCACTAGATGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGAA 138 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||| ||||| |||||||| || |||||||| || | || |||||||| || Sbjct 139 AGGGTACGACCATCTTCAAGTTGTTTCCCTGCAAAGATGAGCCGCTGCTGATCTGGTGGG 198 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 |||||||| || ||||||||||| || || ||||| |||||||||||| | ||||||| Sbjct 199 ATTCCTTCTTTGTCTTGAATCTTAGCCTTCACATTCTCAATCGTATCAGAGGCTTCTACT 258 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || || || || ||||| || || || || || ||||| Sbjct 259 TCCAAAGTAATAGTTTTTCCAGTCAATGTTTTCACGAAAATTTGCAT 305 Score = 113 bits (124), Expect = 9e-20 Identities = 125/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||| || || | || || || ||||| ||||| || || || ||||| Sbjct 307 CCTCCACGAAGACGAAGTACCAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAA 366 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || || || || || || || ||||| || |||| ||| |||||||| || Sbjct 367 AGGGTACGGCCATCCTCAAGCTGCTTGCCGGCAAAAATGAGTCGTTGCTGATCTGGTGGG 426 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATC 82750 |||||||||||||| |||||||| || || ||||||||||| || || Sbjct 427 ATTCCTTCCTTATCCTGAATCTTAGCCTTGACATTTTCAATTGTGTC 473 >seq129645 Length=3385 Score = 98.7 bits (108), Expect = 2e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 82689 TGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTA 82748 |||||||||||||| || ||||| || |||||||| ||||| || ||||||||||| ||| Sbjct 693 TGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTGACATTTTCAATGGTA 634 Query 82749 TCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGC 82808 || ||||| || || | || || || || || || | ||||| ||||| |||||| Sbjct 633 TCTGATGGTTCAACCTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTGACAAAAATCTGC 574 Query 82809 AT 82810 || Sbjct 573 AT 572 Score = 86.0 bits (94), Expect = 1e-11 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||||| ||| || || |||||||| || ||||||||||| || |||||||| | Sbjct 105 TACCACCTCTCAGACGAAGGACCAAGTGCAGTGTTGATTCTTTCTGAATGTTATAATCTG 164 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 82678 | | | | || ||||| |||||||| |||||||| Sbjct 165 ACAAGGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAA 201 >seq642 Length=496311 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766 ||||| || |||||||| || ||||| ||||||||||| |||||| |||||| || || Sbjct 67025 CCTTCTTTGTCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGAAGGTTCAACCTCT 67084 Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || || ||||||||||| | || || || || |||||||| Sbjct 67085 AGGGTGATAGTCTTGCCTGTTAGGGTTTTCACGAAGATCTGCAT 67128 >seq316807 Length=102120 Score = 86.0 bits (94), Expect = 1e-11 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| ||||| | | ||| |||| || || ||||| ||||| || || ||||| ||||| Sbjct 35860 ACCACCTCTAAGTCTCAGCACTAGATGGAGGGTAGACTCTTTTTGAATGTTATAGTCAGA 35919 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 |||| | | || ||||| || ||||| || ||||| || | || || ||||||||||| Sbjct 35920 TAGAGTACGTCCATCTTCAAGCTGTTTCCCTGCAAAAATCAACCTCTGCTGATCTGGAGG 35979 Query 82703 TATTCCT 82709 || ||| Sbjct 35980 AATGCCT 35986 >seq324 Length=236839 Score = 84.2 bits (92), Expect = 4e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 143985 GATCCAGTCTTGCATATAGAACTTAGGAGATGGGCTGATGTTTTTATTATAGCGCCCTTA 144044 ||||| || |||| |||||||| | | |||||| ||||| | || ||||| || ||| Sbjct 140851 GATCCTGTACTGCACATAGAACTACGAAAATGGGCAGATGTAATGATCATAGCACCATTA 140910 Query 144045 ACAGCAAATACGTTAGCAAAAATAGCCAATGGTATATGCGATAATTTACTA 144095 |||||||| ||||||||||| || |||||| | || |||||| | ||| Sbjct 140911 GATGCAAATACTTTAGCAAAAATTGCTAATGGTCTCTGTGATAATCTTCTA 140961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 977658287764939