Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq219765 105 6e-18 >seq219765 Length=875325 Score = 105 bits (116), Expect = 6e-18 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| || |||||||| || ||| | | | || || || || ||||| Sbjct 73147 GTTGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCA-TCTTCAAGTTGTTTGCC 73205 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| ||||| || || ||||| |||||||| ||||| ||| ||| |||| Sbjct 73206 AGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGAT-TTTGGCTT 73264 Query 133583 -GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 || | |||| ||||| | |||||| || || | || | ||| ||||| || || | Sbjct 73265 TGACATTTTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTGCCTGTGAGTG 73324 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||||||||| |||||||| Sbjct 73325 TTTTTACGAAGATCTGCAT 73343 Score = 102 bits (112), Expect = 8e-17 Identities = 152/209 (73%), Gaps = 5/209 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| || |||||||| || || ||||| || || | | | || || || Sbjct 72909 AAATGCAGGGTTGATTCTTTCTGAATGTTATAATCAGACAAGGTTCGGCCA-TCTTCAAG 72967 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 || ||||| || | ||||| ||||| || || ||||| |||||||| ||||| ||| Sbjct 72968 TTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGAT 73027 Query 133574 CTTTTGCTT-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| |||| || | ||||| ||||| | |||||| || || | || | ||| |||| Sbjct 73028 -TTTGGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTGC 73086 Query 133633 CG-GTCAGAGTTTTTACGAAAATCTGCAT 133660 | || || ||||||||||| |||||||| Sbjct 73087 CTTGTGAGTGTTTTTACGAAGATCTGCAT 73115 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| || |||||||| || ||| | | | || || || || ||||| Sbjct 73375 GTCGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCA-TCTTCAAGTTGTTTGCC 73433 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581 || ||||||| ||||| || || ||||| |||||||| ||||| ||| |||||| | Sbjct 73434 AGCAAAAATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCT-TGAATTTTTGCCT 73492 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| || || | || || || || | ||| | ||||| || || || | Sbjct 73493 TGACATTTTCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTTTTCCCAGTGAGGG 73552 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || ||||||||||| Sbjct 73553 TCTTGACAAAAATCTGCAT 73571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481418223293240