Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq14293 89.7 1e-12 seq168112 87.8 4e-12 seq101527 86.0 1e-11 seq48604 86.0 1e-11 >seq14293 Length=520737 Score = 89.7 bits (98), Expect = 1e-12 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 110757 TTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAA 110816 |||||||||||| | ||||| |||||| ||||| | ||||| || | || | ||| Sbjct 326339 TTTGCTATCTATTTAGAACCATGGCATGCAGATGTTTTTGAGTTTCTCGACTTAAAGAAA 326280 Query 110817 AATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGAT 110876 ||| || ||||||||| |||| | ||| | || || || |||||||| | || Sbjct 326279 AATACTGGTAAAGAAGAACAACGAGCCAGGGATCTTTTCTACGCCCTGTGGATTCCTGAC 326220 Query 110877 TTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCT 110936 | |||||| |||||| | || |||| | ||| || | ||||||||| | | | Sbjct 326219 CTCTTCATGCGCCGTGTTGAGGAGAATGCCGACTGGACTTTAATGTGTCCTAACGAATGT 326160 Query 110937 CCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTA 110980 ||||| || | ||||| | || |||| ||||| | ||||| Sbjct 326159 CCTGGGCTTGCCGATGTTTGGGGTGAAGAATTTGAGAAACTTTA 326116 >seq168112 Length=81752 Score = 87.8 bits (96), Expect = 4e-12 Identities = 140/197 (71%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 131433 TATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTCT 131492 ||||||||||| | | || || ||| | ||||| || ||| ||| || | |||| Sbjct 32685 TATTTCCAATTCAGTACCATGACATTTGGCAGATGTACAAAAAAGCTGAAGCATCATTCT 32744 Query 131493 GGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGA-AAAATTAACCTTG 131551 |||| | |||||| | || || | |||||| ||||| | ||||| || | || | | Sbjct 32745 GGACAGCAGAAGAGGTGGACTTGTCTAAAGATCTTGATCACTGGGAGAAGCTGAAACCAG 32804 Query 131552 AATGAAAAAGATTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGGCATTGTT 131611 || ||||| ||||| | || | || || |||||||| || | ||||||||| || || Sbjct 32805 AA-GAAAAGCATTTTATCTCACACGTACTGGCATTCTTTGCTGCAAGTGATGGGATAGTG 32863 Query 131612 ATTGAAAATCTTGTTAT 131628 | ||||||| ||| ||| Sbjct 32864 AATGAAAAT-TTGGTAT 32879 >seq101527 Length=647993 Score = 86.0 bits (94), Expect = 1e-11 Identities = 228/336 (68%), Gaps = 18/336 (5%) Strand=Plus/Minus Query 58754 TCAATATGATTATGGTAAACGTGAGCATCTCCAATAATATGA-TGAACCAATCCAGGttt 58812 |||| |||||| || | |||||||| ||||| | |||| |||| | |||||||| Sbjct 535484 TCAACATGATTTGAATATATATGAGCATCCCCAATTACATGAATGAAAGTA-CCAGGTTT 535426 Query 58813 ttttCCTGTCTTTTTAC--ACATTATATGAAGCAATACGGAGTATGAAACCATATTAAAA 58870 | || || | | || |||||| |||| ||| |||||| | ||||| ||| Sbjct 535425 TAGACCAGTTATGGCAGCGACCATATATGTT--AATAAGGAATATGAAGCAATATTGAAA 535368 Query 58871 GGGATTCCAAGAAACATATCACCACTACGTTGATAAAATTGTAGATTAAGAGTGTCATCT 58930 || || || | ||| ||||| |||||||||||||| | ||| ||| | | |||| Sbjct 535367 GGAATACCTAAAAAGATATCTCCACTACGTTGATATAGTTGACAATTTAAATATCCATCG 535308 Query 58931 GCTTCTACATAAAATTGACATAAAATA-TGACAAGGAGGAAGTGCCATTTTATCAATATC 58989 | ||||||||||| ||| ||| | ||||||||||| | ||| || | || || Sbjct 535307 TCAGTGACATAAAATTG-CATTAAAGAGTGACAAGGAGGTAAAAGCATATTTTTAACTTC 535249 Query 58990 ACTTACATTCCATGCACTGAA--AATAATGCGACGAGAATGAGGGTCATTTTTAATAAGT 59047 | | ||| |||| ||||| ||| | || | ||| || || | |||||||| | Sbjct 535248 AACTGGATTTCATG--CTGAAACAATTAAACGTCTAGATTGCGGATTCTTTTTAAT---T 535194 Query 59048 TCTTC-ACAA--TGTTTTATTTGGTCAAATCCATTA 59080 ||||| |||| ||| ||| |||| ||||||| Sbjct 535193 TCTTCTACAACTCAACTTAGTTGATCAACTCCATTA 535158 >seq48604 Length=384894 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 304946 CAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGT 305005 |||| ||||| |||||| |||| | | | |||| | | |||||||||||||| | Sbjct 193465 CAAAAGTCTGGTAGACCTCTAAAATCTGTCAAGCAAAGATTGAAAGGTAAAGAGGGCAGA 193524 Query 305006 ATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACACCT 305065 |||| || ||||| ||||| |||||||| |||||| || |||| ||| |||||||| Sbjct 193525 GTTCGTGGAAATCTCATGGGGAAACGTGTGGATTTTTCAGCCAGAACTGTCATCACACCA 193584 Query 305066 GA 305067 || Sbjct 193585 GA 193586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181773503469361