Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq219765 111 1e-19 seq243752 109 4e-19 >seq219765 Length=875325 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||| | ||| | ||||| || ||||| ||||| || ||||||||||| || Sbjct 73116 ACCTCCTCTTAGACGAAGGACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATCTGA 73175 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||||| | || || | |||||| || ||||| || | |||||| |||||| | || Sbjct 73176 CAAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGG 73235 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| ||||| | || |||| || | |||||| | || | Sbjct 73236 AATGCCTTCTTTGTCTTGGATTTT-GGCTTTGACATTTTCAATGGTGTCTGAGGGCTCAA 73294 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || || || ||||| | |||||||| |||||||||||| Sbjct 73295 CTTCAAGTGTAATGGTCTTGCCTGTGAGTGTTTTTACGAAGATCTGCATA 73344 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||| | ||| | ||||| || ||||| ||||| || ||||||||||| || Sbjct 73344 ACCTCCTCTTAGACGAAGGACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATCTGA 73403 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||||| | || || | |||||| || |||||||| | |||||| |||||| | || Sbjct 73404 CAAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGAGG 73463 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| |||||| || | |||| || | ||| || || ||| | Sbjct 73464 AATGCCTTCTTTGTCTTGAATTTT-TGCCTTGACATTTTCAATGGTATCTGATGGTTCAA 73522 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || ||||| || || | || || ||||| |||||||| Sbjct 73523 CCTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTGACAAAAATCTGCAT 73571 Score = 89.7 bits (98), Expect = 3e-13 Identities = 160/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | ||| ||||| || || ||||| || ||||| ||||| || Sbjct 72888 CCACCACGGAGACGAAGCACTAAATGCAGGGTTGATTCTTTCTGAATGTTATAATCAGAC 72947 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || || | || || | |||||| || ||||| || | |||||| |||||| | || Sbjct 72948 AAGGTTCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGA 73007 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| ||||| | || |||| || | |||||| | || || Sbjct 73008 ATGCCTTCTTTGTCTTGGATTTT-GGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAAC 73066 Query 33702 GTCAACCGTGATCGTTTTACC-TGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| || || || || || ||| | |||||||| |||||||||||| Sbjct 73067 TTCAAGTGTAATGGTCTTGCCTTGTGAGTGTTTTTACGAAGATCTGCATA 73116 >seq243752 Length=40230 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| ||| | || ||||| || || ||||| || ||||||||||| || Sbjct 7601 CCACCTCTCAGACGAAGGACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCTGAC 7660 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||| | || || | |||||| || |||||||| | |||||| |||||| | || Sbjct 7661 AAAGTGCGGCCATCTTCAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGTGGA 7720 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||||| || ||||| | || |||| ||| | |||||| | || || Sbjct 7721 ATTCCTTCTTTATCTTGGATTTT-AGCTTTGACATTGTCAATGGTGTCTGAGGGCTCAAC 7779 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| || || || || || || | || || ||||||||||||||| Sbjct 7780 CTCAAGTGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATA 7828 Score = 105 bits (116), Expect = 4e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||||| ||| | ||||| ||||| || ||||| || ||||||||||| || Sbjct 7828 ACCACCTCTCAGACGAAGGACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCTGA 7887 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | |||||| | || || | |||||| || ||||| || | ||||||||||||| | || Sbjct 7888 CAATGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGAGG 7947 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| ||||| | || |||| ||| | |||||| || || | Sbjct 7948 AATTCCTTCTTTGTCTTGGATTTT-AGCTTTGACATTGTCAATGGTGTCTGATGGCTCAA 8006 Query 33701 CGTCAACCGTGATCGTTTTACCTGT 33725 | |||| || || || || || || Sbjct 8007 CCTCAAGTGTAATGGTCTTGCCAGT 8031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 327376381081920