Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq219765 116 4e-21 seq37740 96.9 3e-15 seq243752 89.7 5e-13 seq129645 82.4 7e-11 >seq219765 Length=875325 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | |||| ||||| ||||||||||| || || || || |||||| Sbjct 73135 ACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCA 73194 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || ||||| || | | |||| |||||||||||||||||||| ||||||||||| || Sbjct 73195 AGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGG 73254 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| ||| | | ||| | || || | ||||| ||||| | || | || || Sbjct 73255 ATTTTGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTG 73314 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || ||||||| ||| |||||||| Sbjct 73315 CCTGTGAGTGTTTTTACGAAGATCTGCAT 73343 Score = 109 bits (120), Expect = 5e-19 Identities = 151/210 (72%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 || ||||| | | |||| ||||| |||||||| || || || ||| || |||||| Sbjct 72906 ACTAAATGCAGGGTTGATTCTTTCTGAATGTTATAATCAGACAAGGTTCGGCCATCTTCA 72965 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || ||||| || | | |||| |||||||||||||||||||| ||||||||||| || Sbjct 72966 AGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGG 73025 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| ||| | | || | || || | ||||| ||||| | || | || || Sbjct 73026 ATTTTGGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTG 73085 Query 132095 CC-AGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || ||||||| ||| |||||||| Sbjct 73086 CCTTGTGAGTGTTTTTACGAAGATCTGCAT 73115 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| ||||||||||| || || || || |||||| || ||||| || | | Sbjct 73378 GATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCA 73437 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || |||||||||||||||||||| ||||||||||| || ||||||| || | Sbjct 73438 AAAATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTGACA 73497 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | || || || || | || | ||||| ||||| || || || Sbjct 73498 TTTTCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTG 73557 Query 132110 ATGAAAATCTGCAT 132123 | ||||||||||| Sbjct 73558 ACAAAAATCTGCAT 73571 >seq37740 Length=474 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || ||||| ||||||||||| | |||||| |||||| || ||||| || | | Sbjct 112 GATTCCTTTTGGATGTTGTAGTCCGAAAGGGTACGACCATCTTCAAGTTGTTTCCCTGCA 171 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| |||||||| || || |||||||| || ||| || |||| Sbjct 172 AAGATGAGCCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATCTTAGCCTTCACA 231 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | | || ||||| | || | ||||| ||||||| ||||| Sbjct 232 TTCTCAATCGTATCAGAGGCTTCTACTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTC 291 Query 132110 ATGAAAATCTGCATGACT 132127 | |||||| |||||| || Sbjct 292 ACGAAAATTTGCATGCCT 309 >seq243752 Length=40230 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| ||||||||||| || || || || |||||| || |||||||| | | Sbjct 7634 GATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCAAGTTGTTTACCAGCA 7693 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || ||||||||||||||||| || || ||||||||||| ||||| ||| | Sbjct 7694 AAAATAAGACGCTGTTGATCTGGTGGAATTCCTTCTTTATCTTGGATTTTAGCTTTGACA 7753 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||||| || || | || | || || ||||| || || || Sbjct 7754 TTGTCAATGGTGTCTGAGGGCTCAACCTCAAGTGTAATGGTCTTGCCAGTGAGGGTCTTG 7813 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 7814 ACAAAGATCTGCAT 7827 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| |||| |||| ||||| ||||||||||| || || || || |||||| Sbjct 7847 ACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCTGACAATGTGCGGCCATCTTCA 7906 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 || ||||| || | | |||| |||||||| ||||||||||| || |||||||| || Sbjct 7907 AGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTC 7962 >seq129645 Length=3385 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 131989 ATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAA 132048 ||| || |||||||||||||||||||| ||||||||||| || ||||||| || | Sbjct 706 ATATATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTGAC 647 Query 132049 CTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 132108 | ||| | ||||| | || || || || | || | ||||| ||||| || || || Sbjct 646 ATTTTCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTT 587 Query 132109 TATGAAAATCTGCAT 132123 | ||||||||||| Sbjct 586 GACAAAAATCTGCAT 572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474636832146360