Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq168112 159 5e-34 seq14293 145 1e-29 seq286706 96.9 5e-15 >seq168112 Length=81752 Score = 159 bits (176), Expect = 5e-34 Identities = 156/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 39999 CCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAA 40058 ||||||||||||||||||| |||||||| || ||||| ||||||| ||| ||| |||| Sbjct 32876 CCAAATTTTCATTCACTATCCCATCACTTGCAGCAAAGAATGCCAGTACGTGTGAGATAA 32817 Query 40059 AATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTT 40118 ||| ||||| || ||| ||| || | ||||| || | |||||| || | || || | Sbjct 32816 AATGCTTTTCTTCTGGTTTCAGCTTCTCCCAGTGATCAAGATCTTTAGACAAGTCCACCT 32757 Query 40119 CTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATT 40178 |||| |||||||| || || || || || ||||||||||| | ||| || ||| | || | Sbjct 32756 CTTCTGCTGTCCAGAATGATGCTTCAGCTTTTTTGTACATCTGCCAAATGTCATGGTACT 32697 Query 40179 GTATTGGAAAAATAACAAATC 40199 | |||||||| | |||||||| Sbjct 32696 GAATTGGAAATAAAACAAATC 32676 Score = 129 bits (142), Expect = 8e-25 Identities = 163/221 (74%), Gaps = 5/221 (2%) Strand=Plus/Minus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 ||||||| | ||| || | || || |||||| || || ||||||| || ||||| | Sbjct 34282 CCTCATCACGACTGATAAGCTCATTGCTAAATGTTAGGCCTGGCATTATGCCCCGCTTCT 34223 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 | | ||| || ||||||||||| || ||||| || || |||||||| || || ||||| | Sbjct 34222 TCAACCAGAAAATGGCAGCAAACGAGCCAGAGAAAAATATGCCTTCCACAGCAGCAAAAG 34163 Query 39759 CAACAAGTCTCTCTCCGTA-ACTTGTATCATTAT---GTATCCACTTCTGTGCCCAATCA 39814 | |||| ||||| | ||| ||| || | || ||||||||| ||||||||| Sbjct 34162 CCACAACCCTCTCACTGTATGGGTGT-TCGTGATCCCCAATCCACTTCATGGCCCAATCA 34104 Query 39815 GCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 39855 |||||||| | ||||| |||| ||| || || |||||||| Sbjct 34103 GCTTTCTTTGTAACACAGGGCAGTGTCTCAATGGCATTAAA 34063 Score = 102 bits (112), Expect = 1e-16 Identities = 158/223 (71%), Gaps = 6/223 (3%) Strand=Plus/Minus Query 39422 TTTTTAAATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATC 39481 |||| | ||||||||||| | || ||| || || |||||||| || ||| | ||||| Sbjct 34794 TTTTCACATCCTAATTCTACCAGCAGTCTGTCGGCCACAAATTCAATATATTTCCTCATC 34735 Query 39482 ATTTCACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCG 39541 | |||||| |||||||| || | || || |||| || || || |||||||||| || Sbjct 34734 AGTTCACAGTTCATTCCAATCAAATTGACGGGTAAGGCATCTGTAAGAAACTCTTGCTCA 34675 Query 39542 ATGTCTACGGCCTCTGTTAT--TATCG-ATGTTACTACCTCATCACTCGGTGGATGCAAT 39598 ||| ||| || ||||| || | ||| | || ||| | | ||| | || | Sbjct 34674 ATGGTTACAGCATCTGTGATGATTTCGTAAATTCTGGCCTGAGAA---GGTTTGTTCACT 34618 Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCT 39641 |||||| ||||||| ||||| || |||||||| || | |||| Sbjct 34617 AAATGTCTAAACATCAAGCAAGCAAAGTCACAGTGCAAACCCT 34575 >seq14293 Length=520737 Score = 145 bits (160), Expect = 1e-29 Identities = 172/228 (75%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || ||||| || ||||||||||| | | ||||||||||| || |||||||| || | | Sbjct 326125 TCAAATTCTTCACCCCAAACATCGGCAAGCCCAGGACATTCGTTAGGACACATTAAAGTC 326184 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGC-TATAAA 69635 || | ||| |||| ||| || ||| || || || |||||||| || || || ||| Sbjct 326185 CAGTCGGCATTCTCCTCAACACGGCGCATGAAGAGGTCAGGAATCCACAGGGCGTAGAAA 326244 Query 69636 GAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttt-tttAAGATCGAGAAACTCCA 69694 ||||| |||| || | |||||| || || |||||||| |||||| ||||||||||| | Sbjct 326245 -AGATCCCTGGCTCGTTGTTCTTCTTTACCAGTATTTTTCTTTAAG-TCGAGAAACTCAA 326302 Query 69695 TAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTC 69742 || ||| | |||||||||||||| ||| || || | |||| |||| Sbjct 326303 AAACATCTGCATGCCATGGTTCTAAATAGATAGCAAAAGCTCCTGGTC 326350 Score = 102 bits (112), Expect = 1e-16 Identities = 146/203 (72%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || ||||| | || |||| ||||| | || ||||| |||| ||||||||||| | | Sbjct 405633 TCAAATTCTTGACCAAAAACCTCATCAAGCCCTGGACACTCATAAGGACACATCAAAGTC 405692 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 || ||||||| | | ||||| ||| || || || |||| |||||| || ||| Sbjct 405693 CAATCATCATCGGCTTCGACTCGACGCATGAAGAGGTCAGGAACCCAAAGTGC-ATAGGC 405751 Query 69637 -AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCAT 69695 |||| | | ||| ||||||| || || |||||||| || | || | |||||| | Sbjct 405752 CAGATTCTTTGCTCTCATTTCTTCTTTGCCAGTATTTTTCTTTAACTCCAAAAACTCAAA 405811 Query 69696 AATATCAGAATGCCATGGTTCTA 69718 ||| |||| |||||||||||||| Sbjct 405812 AATGTCAGGATGCCATGGTTCTA 405834 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 68701 AGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTG 68760 ||||| |||| || || || || || || || || || | | || |||||||| ||| Sbjct 324721 AGATGATGATTGACAATCTGGAACTCTCCCGACAAAACACGCCTAGAATAAATATTGCTG 324780 Query 68761 GTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATA 68820 || || | || | || || || ||||| ||||||||||||||||| || || ||||| Sbjct 324781 GTGTAAGCCTCTATGGACTCGTTGTTTCCAAGAATTTGAGCAGTTGAGGCTGTAGGCATT 324840 Query 68821 GGTGCCACCAATAAACTATTTCTAAGACCAT 68851 || |||| || | ||| ||||| | ||||| Sbjct 324841 GGAGCCATCAGCAGACTGTTTCTGACACCAT 324871 >seq286706 Length=35893 Score = 96.9 bits (106), Expect = 5e-15 Identities = 109/145 (75%), Gaps = 1/145 (1%) Strand=Plus/Minus Query 163031 TGGTTTTAAAAGATATTAATGGAATATACGAGCCAGGAAAACGTAGATGGCTTAAAATAA 163090 ||||| |||| | || | | || || || |||||||||||| ||||| ||||||| Sbjct 2846 TGGTTATAAATTACTTTCAGAGTATTTATGAACCAGGAAAACGTCATTGGCTGAAAATAA 2787 Query 163091 AGAAAGACTACTTGAACAATGGTTCAATGGCAGACTCTGCAGATTTAGTAGTACTTGGGG 163150 ||||||| || | | |||| ||||| ||||| |||||||| || |||||||| | Sbjct 2786 AGAAAGATTATCTCCATGATGGAAGTATGGCTGACTCAGCAGATTTGGTTGTACTTGGAG 2727 Query 163151 CATATTATGGAAAAGG-AATAAAGG 163174 |||||||||| | || |||||||| Sbjct 2726 CATATTATGGCACTGGAAATAAAGG 2702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 684063271709640