Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq168112 159 3e-34 seq232147 84.2 2e-11 >seq168112 Length=81752 Score = 159 bits (176), Expect = 3e-34 Identities = 161/203 (79%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 ||||| | ||||||||||| || |||||||| ||||| |||||||||||||| | || Sbjct 32678 TTTGTTTTATTTCCAATTCAGTACCATGACATTTGGCAGATGTACAAAAAAGCTGAAGCA 32737 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGA-CTT-AGCACATTGGATTGCA- 43816 ||||| |||||||||||||| || || ||| ||||||| ||| | ||| | ||| | | Sbjct 32738 TCATTCTGGACAGCAGAAGAGGTGGACTTGTCTAAAGATCTTGATCAC-TGGGA--GAAG 32794 Query 43817 TTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGAC 43876 | |||||| ||||||| |||||||| || || |||| || |||||||| || || Sbjct 32795 CTGAAACCAGAAGAAAAGCATTTTATCTCACACGTACTGGCATTCTTTGCTGCAAGTGAT 32854 Query 43877 GGGATAGTCAATGAAAATTTGGT 43899 |||||||| |||||||||||||| Sbjct 32855 GGGATAGTGAATGAAAATTTGGT 32877 Score = 93.3 bits (102), Expect = 3e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 44133 TTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTT 44192 |||| || ||||| | |||||||||||| || || || || |||||||| ||||| || | Sbjct 34157 TTGTGGCTTTTGCTGCTGTGGAAGGCATATTTTTCTCTGGCTCGTTTGCTGCCATTTTCT 34216 Query 44193 GGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTG 44252 |||| ||||| || || | ||||| || | || ||| |||||| | || ||||||| Sbjct 34217 GGTTGAAGAAGCGGGGCATAATGCCAGGCCTAACATTTAGCAATGAGCTTATCAGTCGTG 34276 Query 44253 ATGA 44256 |||| Sbjct 34277 ATGA 34280 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973 ||||||||||| | ||||||| || ||||| ||||| |||||||||||||| || ||| Sbjct 33178 AAGAAGTTCAAGTGACAGAAGCTCGTTGTTTCTATGGTTTTCAAATTGCCATGGAGAATG 33237 Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGA 44019 |||| ||||||||||| | | || || || ||||| || || Sbjct 33238 TTCACAGTGAAATGTACAGCTTATTAATTGACACATACATTAAGGA 33283 >seq232147 Length=1441 Score = 84.2 bits (92), Expect = 2e-11 Identities = 193/291 (66%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 41010 ATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGCCACCTTGTCAT 41069 |||||| ||| || ||||| || | || || | ||||| | || ||||||||| Sbjct 1089 ATAATAATGTCAGCATGGAATCCGGCAGAGGTCAAAGATATGGCGCTTCCTCCTTGTCAT 1148 Query 41070 TTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCA 41129 || ||| ||||| || || | || | || |||||| | ||||| ||||| Sbjct 1149 GCTTTTGTTCAATTTTATGTAGTGGATAATAAATTATCTTGTCAACTTTATCAGAGATCC 1208 Query 41130 GGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATG 41189 | ||| | |||| ||||||||||| ||||| |||||| || || || | ||| Sbjct 1209 GCTGATGTCTTTTTAGGTGTCCCGTTTAATATAGCTTCTTATGCACTTCTAACTCACATG 1268 Query 41190 ATTGCACACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACAT 41249 | || || || || ||| | ||||| ||||||||||| |||||| |||| Sbjct 1269 CTCGCTCAAGTAACAAATCTTGGTGTCGGTGATTTTGTTCACACCACTGGAGATACACAT 1328 Query 41250 ATTTACATTAATCACATAGAGCCGTTAACAGAACAACTGACACGAAAACCT 41300 |||||| | ||||| || || | ||| |||||| ||| || || || Sbjct 1329 ATTTACTTAAATCATATTGATCAAGTAAACTTACAACTCACAAGAGAAACT 1379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395850695213005