Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq219765 111 1e-19 seq243752 109 5e-19 >seq219765 Length=875325 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || ||||| ||||| ||||| || || |||| | ||||| Sbjct 73135 ACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCA 73194 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || ||||| || || | ||||||||||||||||| || || | || ||||| || | Sbjct 73195 AGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGG 73254 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || ||| ||| | |||| | ||||||| || |||||||| || || || | ||| Sbjct 73255 ATTTTGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTG 73314 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 || || || ||||| || ||||| |||||| || || Sbjct 73315 CCTGTGAGTGTTTTTACGAAGATCTGCATACCTCCT 73350 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/217 (70%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 || ||||| | || || ||||| ||||| || || || || | | || | ||||| Sbjct 72906 ACTAAATGCAGGGTTGATTCTTTCTGAATGTTATAATCAGACAAGGTTCGGCCATCTTCA 72965 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || ||||| || || | ||||||||||||||||| || || | || ||||| || | Sbjct 72966 AGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGG 73025 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || ||| ||| | | || | ||||||| || |||||||| || || || | ||| Sbjct 73026 ATTTTGGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTG 73085 Query 27219 CC-CGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 || || || ||||| || ||||| |||||| || || Sbjct 73086 CCTTGTGAGTGTTTTTACGAAGATCTGCATACCTCCT 73122 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || ||||| ||||| ||||| || || |||| | ||||| Sbjct 73363 ACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCTTCA 73422 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || ||||| || || ||||||||||||||||||| || || | || ||||| || Sbjct 73423 AGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGA 73482 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || || | |||| | || |||| | |||||| ||||| || |||| ||| Sbjct 73483 ATTTTTGCCTTGACATTTTCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTTTTC 73542 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || ||||| || ||||| Sbjct 73543 CCAGTGAGGGTCTTGACAAAAATCTGCAT 73571 >seq243752 Length=40230 Score = 109 bits (120), Expect = 5e-19 Identities = 167/237 (70%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 27013 AATTATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTG 27071 |||||||| || || | || || | || ||||| | || || ||||| ||||| ||| Sbjct 7592 AATTATTGGCCACCTCTCAGACGAAGGACTAAATGCAGTGTCGATTCTTTCTGAATGTTG 7651 Query 27072 TAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGA 27131 || || || |||| | ||||| || |||||||| || |||| |||||||||||| Sbjct 7652 TAATCTGACAAAGTGCGGCCATCTTCAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGA 7711 Query 27132 TCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTG 27191 || || || | || |||||||| ||| || ||| | | || | ||||||| | Sbjct 7712 TCTGGTGGAATTCCTTCTTTATCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCTGAG 7771 Query 27192 GCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||||| || || || || | ||||| || || || || |||||||| |||||| Sbjct 7772 GGCTCAACCTCAAGTGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATA 7828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423218111337912