Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06]
331,401 sequences; 916,388,084 total letters
Query= NC_027988.2
Length=47636
Score E
Sequences producing significant alignments: (Bits) Value
seq124376 87.8 5e-13
seq121381 82.4 2e-11
>seq124376
Length=290
Score = 87.8 bits (96), Expect = 5e-13
Identities = 158/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 34001 AAGATGAATCCGTTGTCGTGGTTACGTACTTTCCAATTGACATCTTCATCAGCTACATCT 34060
||||||||||||||||||||||| || || |||||||| || |||||||||| |||||
Sbjct 64 AAGATGAATCCGTTGTCGTGGTTGCGCACCTTCCAATTCACTTCTTCATCAGGAACATCA 123
Query 34061 TTGTTACGTGCCTTACGTTGAACATCAATCACTTTCCCCATGAAGACATGATAACGATAT 34120
|||||||| || || | ||||| || || | || ||||| |||||||
Sbjct 124 AAACGTCGTGCCTTTCGCTGCTTGTGAATCATCTTGCCGTTTAACACATGCACACGATAT 183
Query 34121 TC---ATGCTTCTTAGGAATGTATGTTACATAGAGAGGAGCTTTAACAAGTTCATCAACA 34177
|| |||||||| | | ||| || || || || || ||||| ||||| |
Sbjct 184 TCGTTCTGCTTCTTGACATAGCGTGT---GTACAGCGGGGCCTTTACAAGCTCATCTTCG 240
Query 34178 TTGTCAGCAATAACAATCCCAGCGCCGGAATGCCCACTAAGGATAGTGCG 34227
|| || ||||| | || ||| || ||| ||| | |||| ||| ||
Sbjct 241 TTCTCGGCAATGATGATACCATTTCCACTATGGCCATTGAGGACAGTACG 290
>seq121381
Length=294
Score = 82.4 bits (90), Expect = 2e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 27459 AGAGGAAATGTCTCAGACAACCAACGCGGCTTATCTTCTACATCATTTCCTTGTTCATCT 27518
|| || |||||||| ||||||||| |||||||| || | || || ||||| ||||||
Sbjct 194 AGTGGCAATGTCTCGCTCAACCAACGTGGCTTATCCTCAATGTCGTTACCTTGCTCATCT 135
Query 27519 TTCATAAACTCTGTCGTAAACTCGTATGTCACCAT 27553
||||||||||| || || | || ||||||| |||
Sbjct 134 TTCATAAACTCAGTGGTGAGTTCATATGTCAGCAT 100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151714187057676
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |