Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq37740 176 5e-39 seq243752 174 2e-38 seq219765 163 3e-35 seq129645 120 3e-22 seq316807 86.0 7e-12 seq642 84.2 2e-11 >seq37740 Length=474 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || | || || || ||||||||| | || || || | | Sbjct 305 ATGCAAATTTTCGTGAAAACATTGACTGGAAAAACTATTACTTTGGAAGTAGAAGCCTCT 246 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| |||||||||| ||||| ||||| || ||||| || ||||| ||| Sbjct 245 GATACGATTGAGAATGTGAAGGCTAAGATTCAAGACAAAGAAGGAATCCCACCAGATCAG 186 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || || ||||| || |||| ||||||||| | ||||| || Sbjct 185 CAGCGGCTCATCTTTGCAGGGAAACAACTTGAAGATGGTCGTACCCTTTCGGACTACAAC 126 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| |||||||||||||| | |||||||| || || Sbjct 125 ATCCAAAAGGAATCGACTCTTCATCTAGTGCTCCGTCTTCGTGGAGG 79 Score = 141 bits (156), Expect = 1e-28 Identities = 128/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 27472 ATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGT 27531 |||| |||| | |||||||| |||||||| ||||| ||||| || ||||| ||||| || Sbjct 467 ATTGAAAATGTCAAGGCTAAGATTCAGGATAAGGAAGGAATCCCACCAGATCAGCAACGA 408 Query 27532 CTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAA 27591 || |||||||| || ||||| || ||||||| |||||||| | ||||| || |||| Sbjct 407 CTCATTTTTGCCGGCAAGCAGCTTGAGGATGGCCGTACCCTTTCTGACTACAACATCCAG 348 Query 27592 AAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||| || ||||| || | |||||||| || || Sbjct 347 AAGGAATCCACCCTCCATCTGGTACTTCGTCTTCGTGGAGG 307 >seq243752 Length=40230 Score = 174 bits (192), Expect = 2e-38 Identities = 177/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || |||||||| ||||| |||||||||||| | Sbjct 7827 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACACTTGAGGTTGAGCCCTCA 7768 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | || |||||||| || || || || |||||||| ||||| || Sbjct 7767 GACACCATTGACAATGTCAAAGCTAAAATCCAAGATAAAGAAGGAATTCCACCAGATCAA 7708 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| |||||||||||||| ||||| || |||| || || | |||| || || Sbjct 7707 CAGCGTCTTATTTTTGCTGGTAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 7648 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 | || || ||||| || || ||| ||||| | ||||| | ||||| ||| Sbjct 7647 ATTCAGAAAGAATCGACACTGCATTTAGTCCTTCGTCTGAGAGGTGGCCAA 7597 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| ||||| |||||||||||| || || | ||||| ||| | || ||| Sbjct 8031 ACTGGCAAGACCATTACACTTGAGGTTGAGCCATCAGACACCATTGACAATGTCAAAGCT 7972 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 ||||| || ||||| || |||||||||||||| ||||||||||| || |||||||| || Sbjct 7971 AAAATCCAAGACAAAGAAGGAATTCCTCCAGATCAGCAGCGTCTCATCTTTGCTGGCAAA 7912 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||| || |||| || || | |||| || || | || || ||||| || || || Sbjct 7911 CAACTTGAAGATGGCCGCACATTGTCAGATTACAACATTCAGAAAGAATCAACACTACAC 7852 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 | ||| | ||||| | ||||| Sbjct 7851 TTGGTCCTTCGTCTGAGAGGTGG 7829 >seq219765 Length=875325 Score = 163 bits (180), Expect = 3e-35 Identities = 167/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| || || || || |||||||| || |||||||| || Sbjct 73571 ATGCAGATTTTTGTCAAGACCCTCACTGGGAAAACTATTACCCTAGAGGTTGAACCATCA 73512 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| |||| | ||||| |||||||| ||||| || || ||||||||||| || Sbjct 73511 GATACCATTGAAAATGTCAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAA 73452 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||||||||| || ||||| || |||| || || | |||| || || Sbjct 73451 CAGCGTCTCATTTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 73392 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 | || || ||||| ||||| || | ||| | ||||| Sbjct 73391 ATTCAGAAAGAATCGACTCTGCACTTGGTCCTTCGTCT 73354 Score = 141 bits (156), Expect = 1e-28 Identities = 169/228 (74%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACC-GGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||| ||||| || || || || || |||||||| ||||| ||||| |||||| | Sbjct 73115 ATGCAGATCTTCGTAAAAACACTCACAAGGCAAGACCATTACACTTGAAGTTGAGCCCTC 73056 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| ||| | || || ||||| || ||||| || || ||||||||||| || Sbjct 73055 AGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCA 72996 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||||| || |||||||| || ||||| || |||| || ||| | | || ||||| Sbjct 72995 ACAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGAACCTTGTCTGATTATAA 72936 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || ||||| || || ||| |||| | ||||| || ||||| Sbjct 72935 CATTCAGAAAGAATCAACCCTGCATTTAGTGCTTCGTCTCCGTGGTGG 72888 Score = 141 bits (156), Expect = 1e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || |||||||| ||||| ||||| |||||| | Sbjct 73343 ATGCAGATCTTCGTAAAAACACTCACAGGCAAGACCATTACACTTGAAGTTGAGCCCTCA 73284 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| |||| | || || ||||| || ||||| || || ||||||||||| || Sbjct 73283 GACACCATTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 73224 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| || ||||| || |||| || || | |||| || || Sbjct 73223 CAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 73164 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 | || || ||||| ||||| || | ||| | ||||| Sbjct 73163 ATTCAGAAAGAATCAACTCTGCACTTGGTCCTTCGTCT 73126 >seq129645 Length=3385 Score = 120 bits (132), Expect = 3e-22 Identities = 105/131 (80%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| || || || || |||||||| || |||||||| || Sbjct 572 ATGCAGATTTTTGTCAAGACCCTCACTGGGAAAACTATTACCCTAGAGGTTGAACCATCA 631 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| |||| | ||||| |||||||| ||||| || || ||||||||||| || Sbjct 632 GATACCATTGAAAATGTCAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAA 691 Query 27526 CAGCGTCTAAT 27536 |||||||| || Sbjct 692 CAGCGTCTCAT 702 >seq316807 Length=102120 Score = 86.0 bits (94), Expect = 7e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 || ||||||||||| |||||| | | |||||||| || || || || || |||| ||| Sbjct 35985 GGCATTCCTCCAGATCAGCAGAGGTTGATTTTTGCAGGGAAACAGCTTGAAGATGGACGT 35926 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 || ||| | |||||||| | ||||| || || || || |||||||| || | ||| | Sbjct 35925 ACTCTATCTGACTATAACATTCAAAAAGAGTCTACCCTCCATCTAGTGCTGAGACTTAGA 35866 Query 27628 GGTGG 27632 ||||| Sbjct 35865 GGTGG 35861 >seq642 Length=496311 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || ||||||||||| || || |||||||| | | Sbjct 67128 ATGCAGATCTTCGTGAAAACCCTAACAGGCAAGACTATCACCCTAGAGGTTGAACCTTCT 67069 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 |||| ||||| |||| | || ||||||||||| ||||| || || Sbjct 67068 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGACAAAGAAGG 67025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567947882039120