Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq219765 111 1e-19 seq37740 111 1e-19 seq243752 109 3e-19 >seq219765 Length=875325 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| ||||| | ||||| || ||||| || || |||||||| |||||||| Sbjct 73117 CCTCCTCTTAGACGAAGGACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATCTGAC 73176 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || | |||||||||||||| || ||||| || | ||||||||| || || || Sbjct 73177 AAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGA 73236 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | || || |||||| ||| ||| | ||| || | ||| |||||| | ||| || Sbjct 73237 ATGCCTTCTTTGTCTTGGAT-TTTGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCAAC 73295 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || || || || || | ||||| || || |||||||| Sbjct 73296 TTCAAGTGTAATGGTCTTGCCTGTGAGTGTTTTTACGAAGATCTGCAT 73343 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| ||||| | ||||| || ||||| || || |||||||| |||||||| Sbjct 73345 CCTCCTCTTAGACGAAGGACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATCTGAC 73404 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || | |||||||||||||| || ||||| || | ||||||||| || || || Sbjct 73405 AAAGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGAGGA 73464 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | || || |||||| ||| ||||| || || | ||| || ||| || || Sbjct 73465 ATGCCTTCTTTGTCT-TGAATTTTTGCCTTGACATTTTCAATGGTATCTGATGGTTCAAC 73523 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || ||||| || || | || || |||||||||||||| Sbjct 73524 CTCTAGGGTAATAGTTTTCCCAGTGAGGGTCTTGACAAAAATCTGCAT 73571 Score = 102 bits (112), Expect = 5e-17 Identities = 157/220 (71%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||| ||||| || || || || |||||||||||||| || | ||||| Sbjct 72897 AGACGAAGCACTAAATGCAGGGTTGATTCTTTCTGAATGTTATAATCAGACAAGGTTCGG 72956 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | |||||||||||||| || ||||| || | ||||||||| || || || | || || Sbjct 72957 CCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCT 73016 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| ||| ||| | ||| || | ||| |||||| | ||| ||||| | || Sbjct 73017 TTGTCTTGGAT-TTTGGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACTTCAAGTGT 73075 Query 34668 TATCGTTTTACC-GGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || | ||||| || || |||||||| Sbjct 73076 AATGGTCTTGCCTTGTGAGTGTTTTTACGAAGATCTGCAT 73115 >seq37740 Length=474 Score = 111 bits (122), Expect = 1e-19 Identities = 169/238 (71%), Gaps = 2/238 (1%) Strand=Plus/Plus Query 34471 CAATCGTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTA 34530 || |||| ||| || | |||||| | ||| | ||| ||||| |||||||| ||||| Sbjct 70 CATTCGTTGCCTCCACGAAGACGGAGCACTAGATGAAGAGTCGATTCCTTTTGGATGTTG 129 Query 34531 TAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGG 34590 || || ||||| || || | |||||||||||||| || ||||| || | ||||| || Sbjct 130 TAGTCCGAAAGGGTACGACCATCTTCAAGTTGTTTCCCTGCAAAGATGAGCCGCTGCTGA 189 Query 34591 TCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTC 34649 || || || | ||| || |||||| ||| || | || || | ||| || || Sbjct 190 TCTGGTGGGATTCCTTCTTTGTCT-TGAATCTTAGCCTTCACATTCTCAATCGTATCAGA 248 Query 34650 GCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || ||||||| || || ||||| || || || |||||||| ||||| |||||| Sbjct 249 GGCTTCTACTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTCACGAAAATTTGCATG 306 >seq243752 Length=40230 Score = 109 bits (120), Expect = 3e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| ||||| | || ||||| || || || || |||||||| |||||||| Sbjct 7600 GCCACCTCTCAGACGAAGGACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCTGA 7659 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | || || | ||||||||||||||||| ||||| || | ||||||||| || || || Sbjct 7660 CAAAGTGCGGCCATCTTCAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGTGG 7719 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||| || || ||| ||| ||| | ||| || | ||| |||||| | ||| | Sbjct 7720 AATTCCTTCTTTATCTTGGAT-TTTAGCTTTGACATTGTCAATGGTGTCTGAGGGCTCAA 7778 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | || || || || || || | || || ||||| |||||||| Sbjct 7779 CCTCAAGTGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 7827 Score = 93.3 bits (102), Expect = 3e-14 Identities = 113/153 (74%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| ||||| | ||||| || || || || || |||||||| |||||||| Sbjct 7829 CCACCTCTCAGACGAAGGACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCTGAC 7888 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | ||| || | |||||||||||||| || ||||| || | |||||| || || || || Sbjct 7889 AATGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGAGGA 7948 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC 34632 | ||| || |||||| ||| ||| | ||| || Sbjct 7949 ATTCCTTCTTTGTCTTGGAT-TTTAGCTTTGAC 7980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313458422980433