Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq219765 161 9e-35 seq243752 145 7e-30 seq37740 136 3e-27 seq129645 116 3e-21 seq642 84.2 2e-11 >seq219765 Length=875325 Score = 161 bits (178), Expect = 9e-35 Identities = 174/229 (76%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACC-GGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||||| || |||||||| || || |||||| | ||||| |||||||| || || || Sbjct 73115 ATGCAGATCTTCGTAAAAACACTCACAAGGCAAGACCATTACACTTGAAGTTGAGCCCTC 73056 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||||| |||||| ||||| ||||||||||||||||| || || ||||| Sbjct 73055 AGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCA 72996 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||||| | || | || ||||||||| | ||||| | ||| | || ||||| || Sbjct 72995 ACAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGAACCTTGTCTGATTATAA 72936 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 |||||| || || || ||| | ||||| || | ||| | || |||||| Sbjct 72935 CATTCAGAAAGAATCAACCCTGCATTTAGTGCTTCGTCTCCGTGGTGGC 72887 Score = 152 bits (168), Expect = 4e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || |||||||| || || |||||| | ||||| |||||||| || || || Sbjct 73343 ATGCAGATCTTCGTAAAAACACTCACAGGCAAGACCATTACACTTGAAGTTGAGCCCTCA 73284 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| ||||| ||||||||||||||||| || || |||||| Sbjct 73283 GACACCATTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 73224 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||||||| | ||||| | || | || ||||||||| Sbjct 73223 CAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 73164 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 ||||| || || || || | || ||||| Sbjct 73163 ATTCAGAAAGAATCAACTCTGCACTTGGT 73135 Score = 147 bits (162), Expect = 2e-30 Identities = 168/225 (75%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 26972 TTTTAATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCT 27031 |||||||||| | |||||||| ||||| || || || || || || ||||||| || Sbjct 73584 TTTTAATTTACAG---ATGCAGATTTTTGTCAAGACCCTCACTGGGAAAACTATTACCCT 73528 Query 27032 TGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGG 27091 || || ||||| || || | ||||| | ||||| ||||||||||||||||||||| Sbjct 73527 AGAGGTTGAACCATCAGATACCATTGAAAATGTCAAGGCAAAAATTCAAGACAAAGAAGG 73468 Query 27092 CATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGAC 27151 ||| || || |||||||||||| | || | || ||||||||| | ||||| | || Sbjct 73467 CATTCCTCCAGATCAACAGCGTCTCATTTTTGCTGGCAAACAACTTGAAGATGGCCGCAC 73408 Query 27152 CGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGT 27196 | || |||||||||||||| || || ||||| | || ||||| Sbjct 73407 TTTGTCAGATTACAACATTCAGAAAGAATCGACTCTGCACTTGGT 73363 >seq243752 Length=40230 Score = 145 bits (160), Expect = 7e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || |||||| | ||||| ||||| || || || || Sbjct 7827 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACACTTGAGGTTGAGCCCTCA 7768 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| ||||| ||||| |||||||| || ||||| |||||| Sbjct 7767 GACACCATTGACAATGTCAAAGCTAAAATCCAAGATAAAGAAGGAATTCCACCAGATCAA 7708 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || |||||| | ||||| | || | || ||||||||| Sbjct 7707 CAGCGTCTTATTTTTGCTGGTAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 7648 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||||| || || ||||| | ||||| || | ||| || | |||||| Sbjct 7647 ATTCAGAAAGAATCGACACTGCATTTAGTCCTTCGTCTGAGAGGTGGC 7600 Score = 123 bits (136), Expect = 2e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 || |||||| | ||||| ||||| || || || || ||| | ||||| | |||||| Sbjct 8031 ACTGGCAAGACCATTACACTTGAGGTTGAGCCATCAGACACCATTGACAATGTCAAAGCT 7972 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 ||||| |||||||||||||| || || || ||||| |||||| | || | || |||||| Sbjct 7971 AAAATCCAAGACAAAGAAGGAATTCCTCCAGATCAGCAGCGTCTCATCTTTGCTGGCAAA 7912 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 ||| | ||||| | || | || |||||||||||||| || || || || |||| Sbjct 7911 CAACTTGAAGATGGCCGCACATTGTCAGATTACAACATTCAGAAAGAATCAACACTACAC 7852 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| | ||| || | ||||| || Sbjct 7851 TTGGTCCTTCGTCTGAGAGGTGGTAT 7826 >seq37740 Length=474 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || ||||| |||| || || |||||||| | ||||| ||| | || Sbjct 306 CATGCAAATTTTCGTGAAAACATTGACTGGAAAAACTATTACTTTGGAAGTAGAAGCCTC 247 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || ||||||||| || || || ||||||||||||||||| || ||||| ||||| Sbjct 246 TGATACGATTGAGAATGTGAAGGCTAAGATTCAAGACAAAGAAGGAATCCCACCAGATCA 187 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | || || |||||| | ||||| || ||| |||| || ||||| Sbjct 186 GCAGCGGCTCATCTTTGCAGGGAAACAACTTGAAGATGGTCGTACCCTTTCGGACTACAA 127 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 ||| |||||||| ||||| | ||| | || | ||| | || || |||| Sbjct 126 CATCCAAAAGGAATCGACTCTTCATCTAGTGCTCCGTCTTCGTGGAGGCA 77 >seq129645 Length=3385 Score = 116 bits (128), Expect = 3e-21 Identities = 116/150 (77%), Gaps = 3/150 (2%) Strand=Plus/Plus Query 26972 TTTTAATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCT 27031 |||||||||| | |||||||| ||||| || || || || || || ||||||| || Sbjct 559 TTTTAATTTACAG---ATGCAGATTTTTGTCAAGACCCTCACTGGGAAAACTATTACCCT 615 Query 27032 TGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGG 27091 || || ||||| || || | ||||| | ||||| ||||||||||||||||||||| Sbjct 616 AGAGGTTGAACCATCAGATACCATTGAAAATGTCAAGGCAAAAATTCAAGACAAAGAAGG 675 Query 27092 CATACCACCCGATCAACAGCGTTTAATATA 27121 ||| || || |||||||||||| | ||||| Sbjct 676 CATTCCTCCAGATCAACAGCGTCTCATATA 705 Score = 91.5 bits (100), Expect = 1e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || |||||||| || || |||||| | ||||| |||||||| || || || Sbjct 105 ATGCAGATCTTCGTAAAAACACTCACAGGCAAGACCATTACACTTGAAGTTGAGCCCTCA 46 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGC 27092 || | ||||| | |||||| ||||| ||||||||||||||| Sbjct 45 GATACCATTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGC 1 >seq642 Length=496311 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || |||||| |||| || || || || ||||| || Sbjct 67128 ATGCAGATCTTCGTGAAAACCCTAACAGGCAAGACTATCACCCTAGAGGTTGAACCTTCT 67069 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGG 27091 || | ||||| | |||||| |||||||||||||||||||| Sbjct 67068 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGACAAAGAAGG 67025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433164973539593