Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq101527 150 1e-31 seq232147 118 9e-22 >seq101527 Length=647993 Score = 150 bits (166), Expect = 1e-31 Identities = 240/342 (70%), Gaps = 3/342 (1%) Strand=Plus/Minus Query 126050 TCTTGATAATTGTGTATGTATTGCATCCATATGATTGGAATAAATATGTGCATCTCCAAA 126109 ||||| |||||| || ||| || | |||||| ||||| ||||| ||||| |||| Sbjct 535509 TCTTGTTAATTGAAGATTAATTTGGTCAACATGATTTGAATATATATGAGCATCCCCAAT 535450 Query 126110 TGTATGAATGAATTCACCCACCTCAAGTCCACATTCTTTTGCAACAAGATGTGTCAGTAA 126169 | ||||||||| ||| | || ||| | || || | || ||| | ||| Sbjct 535449 TACATGAATGAAAGTACCAGGTTTTAGACCAGTTATGGCAGCGACCATATATGTTAATAA 535390 Query 126170 AGCATAACTTGCAATATTGAAAGGAACACCTAAAAATATATCAGCACTTCTTTGATATAA 126229 | ||| |||||||||||||||| ||||||||| ||||| |||| | |||||||| Sbjct 535389 GGAATATGAAGCAATATTGAAAGGAATACCTAAAAAGATATCTCCACTACGTTGATATAG 535330 Query 126230 TTGACAATTTAATTTACCCTCTT--GT-ACGTAAAATTGAAACATTGTGTGGCAAGGTGG 126286 |||||||||||| | || || | || || |||||||| | | | ||| ||||| || Sbjct 535329 TTGACAATTTAAATATCCATCGTCAGTGACATAAAATTGCATTAAAGAGTGACAAGGAGG 535270 Query 126287 TAATGCCATTGAATCGATTTCAGTAGGATTCCATGCTGAAACAATGTGACGTCGAGAGTT 126346 ||| ||| | | |||| ||||| |||||||||||||| ||||| ||| | Sbjct 535269 TAAAAGCATATTTTTAACTTCAACTGGATTTCATGCTGAAACAATTAAACGTCTAGATTG 535210 Query 126347 TGGATTGGTTTTAATTTGTTGTATAACTGATTTTAATTGATC 126388 ||||| ||||||||| || || |||| | ||| |||||| Sbjct 535209 CGGATTCTTTTTAATTTCTTCTACAACTCAACTTAGTTGATC 535168 Score = 89.7 bits (98), Expect = 4e-13 Identities = 129/180 (72%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 126602 ATAATTTTCAAATGCCCATTCATTCCATATATTGTTATTA--TATTTAAGTAGGTATTGA 126659 ||| |||| ||||| |||||||| || || | ||| | | ||||| ||||||||| Sbjct 535032 ATATTTTTTAAATGGTCATTCATTTCAAAT--TCTTACTCCGTTTTTAACAAGGTATTGA 534975 Query 126660 ATGTTTGTATCTCCTTTAATAAACCATAATAATTCAGTTGCTACTAATTTAAAAGAAACC 126719 || || |||||||| |||| ||| |||| ||||||| | || |||||||| ||| Sbjct 534974 ATATTAGTATCTCCCTTAACAAATCATAGTAATTCAACTAAAACAGATTTAAAATGAACT 534915 Query 126720 TTTTTGGTTGTAAGTAAAGGAAACCCTTTGGTTAAATCGAAACGCAATTGATGCCCAAAT 126779 ||||| ||||| | | |||||| | || ||| || |||| |||||| || ||| Sbjct 534914 TTTTTAGTTGTGACAAGAGGAAATTCATTTTTTAGATTATAACGAGATTGATATCCGAAT 534855 >seq232147 Length=1441 Score = 118 bits (130), Expect = 9e-22 Identities = 233/344 (68%), Gaps = 3/344 (1%) Strand=Plus/Minus Query 125985 TCATAATTAATATCAAAAATTGATTTATCTGT---ATTAATTTTTAATTGAGGTGGTAGA 126041 ||||| |||| |||| | ||||||||| || ||| | ||||| || || || Sbjct 1441 TCATATTTAAAATCATATATTGATTTAATTGAGGGATTGAGTTTTATTTTTGGAAGTTTG 1382 Query 126042 TAACTATCTCTTGATAATTGTGTATGTATTGCATCCATATGATTGGAATAAATATGTGCA 126101 ||| | ||||||| | |||| | || | ||| |||||||| | |||||||||| | Sbjct 1381 TAAGTTTCTCTTGTGAGTTGTAAGTTTACTTGATCAATATGATTTAAGTAAATATGTGTA 1322 Query 126102 TCTCCAAATGTATGAATGAATTCACCCACCTCAAGTCCACATTCTTTTGCAACAAGATGT 126161 |||||| || |||| || ||||| || |||| | ||| || | | || Sbjct 1321 TCTCCAGTGGTGTGAACAAAATCACCGACACCAAGATTTGTTACTTGAGCGAGCATGTGA 1262 Query 126162 GTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACCTAAAAATATATCAGCACTTCTT 126221 || || | |||||| || ||||| || || ||||||||||| | |||||| ||| Sbjct 1261 GTTAGAAGTGCATAAGAAGCTATATTAAACGGGACACCTAAAAAGACATCAGCGGATCTC 1202 Query 126222 TGATATAATTGACAATTTAATTTACCCTCTTGTACGTAAAATTGAAACATTGTGTGGCAA 126281 ||||| | ||||||| ||||||| || ||| |||||||||| | | || ||| Sbjct 1201 TGATAAAGTTGACAAGATAATTTATTATCCACTACATAAAATTGAACAAAAGCATGACAA 1142 Query 126282 GGTGGTAATGCCATTGAATCGATTTCAGTAGGATTCCATGCTGA 126325 || || | ||||| | || || | |||||||||||||| Sbjct 1141 GGAGGAAGCGCCATATCTTTGACCTCTGCCGGATTCCATGCTGA 1098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406948091620007