Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq219765 96.9 2e-15 seq37740 82.4 5e-11 >seq219765 Length=875325 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA--AGCA 27847 ||||| |||||||| || || || ||||||||| |||||| | || || ||| | || Sbjct 73571 ATGCAGATTTTTGTCAAGACCCTCACTGGGAAAACTATTACCCTAGAGGTTGAACCATCA 73512 Query 27848 CCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || || | ||| ||||| |||||| ||||||||||| |||| || | Sbjct 73511 GATACCATTGAAAAT--GTCAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCAGATC 73454 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | || || | |||||||| || |||||| | || || | |||| ||||| ||||||| Sbjct 73453 AACAGCGTCTCATTTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACA 73394 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 |||| || ||||| ||| |||| ||||| Sbjct 73393 ACATTCAGAAAGAATCGACTCTGCACTTGGT 73363 >seq37740 Length=474 Score = 82.4 bits (90), Expect = 5e-11 Identities = 162/238 (68%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| |||||||| | ||||| ||| |||||| | || || ||| | | Sbjct 305 ATGCAAATTTTCGTGAAAACATTGACTGGAAAAACTATTACTTTGGAAGTAGAAGCCTCT 246 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || |||| | ||| || || || || ||||||||||| | || || | Sbjct 245 GATACGATTGAGAAT--GTGAAGGCTAAGATTCAAGACAAAGAAGGAATCCCACCAGATC 188 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| ||| | || ||||| || |||||| | || || | || | | | || || |||| Sbjct 187 AGCAGCGGCTCATCTTTGCAGGGAAACAACTTGAAGATGGTCGTACCCTTTCGGACTACA 128 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGCGACGATTG 28025 |||||||||| || ||| | ||| | || | ||| | ||||| ||| |||| || Sbjct 127 ACATCCAAAAGGAATCGACTCTTCATCTAGTGCTCCGTCTTCGTGGAGGCAACGAATG 70 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354425089670727