Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq219765 131 4e-25 seq37740 131 4e-25 >seq219765 Length=875325 Score = 131 bits (144), Expect = 4e-25 Identities = 152/204 (75%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || || || || ||||| || ||||||||||| | | ||| | |||||||| || || Sbjct 72912 TGCAGGGTTGATTCTTTCTGAATGTTATAATCAGACAAGGTTCGGCCATCTTCAAGTTGT 72971 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| || ||||| || || ||||| || ||||||| ||||| ||||| ||||| || Sbjct 72972 TTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTG 73031 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCC-CGT 211090 ||| || || || |||||||| ||| ||||| || || || || ||||| || || Sbjct 73032 GCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTGCCTTGT 73091 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 ||| || ||||| || | |||||| Sbjct 73092 GAGTGTTTTTACGAAGATCTGCAT 73115 >seq37740 Length=474 Score = 131 bits (144), Expect = 4e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||| | || || || |||||||| || || ||||||||||| || |||| ||| Sbjct 81 TCCACGAAGACGGAGCACTAGATGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGAAAG 140 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| | |||||||| || || || ||||| ||||| || || || || || || || | Sbjct 141 GGTACGACCATCTTCAAGTTGTTTCCCTGCAAAGATGAGCCGCTGCTGATCTGGTGGGAT 200 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 |||||| ||||| || ||||| ||||| || || || || |||||| ||| || || Sbjct 201 TCCTTCTTTGTCTTGAATCTTAGCCTTCACATTCTCAATCGTATCAGAGGCTTCTACTTC 260 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||| || || ||||| || | || || || || | ||||| Sbjct 261 CAAAGTAATAGTTTTTCCAGTCAATGTTTTCACGAAAATTTGCAT 305 Score = 109 bits (120), Expect = 1e-18 Identities = 123/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||| | || || || || || ||||| || || |||||||| || || | ||| Sbjct 309 TCCACGAAGACGAAGTACCAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAG 368 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| | ||||| || ||||||||||| || || || || ||||| || || || || | Sbjct 369 GGTACGGCCATCCTCAAGCTGCTTGCCGGCAAAAATGAGTCGTTGCTGATCTGGTGGGAT 428 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTC 211054 ||||||||| ||||| ||||| || || ||||| || ||||| Sbjct 429 TCCTTCCTTATCCTGAATCTTAGCCTTGACATTTTCAATTGTGTC 473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1154230153309365