Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq219765 143 2e-29 seq243752 138 8e-28 seq37740 104 2e-17 seq129645 87.8 1e-12 >seq219765 Length=875325 Score = 143 bits (158), Expect = 2e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||| ||||| || || || || || || |||||||| || | Sbjct 73343 ATGCAGATCTTCGTAAAAACACTCACAGGCAAGACCATTACACTTGAAGTTGAGCCCTCA 73284 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||||| | ||| ||||| ||||||||||| | || ||||||||| Sbjct 73283 GACACCATTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 73224 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| ||||||||||| ||||| | |||||||| ||||||||| Sbjct 73223 CAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 73164 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||| || || Sbjct 73163 ATTCAGAAAGAATCAAC 73147 Score = 140 bits (154), Expect = 2e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || |||||||| || ||||| || || || || ||||| | | Sbjct 73571 ATGCAGATTTTTGTCAAGACCCTCACTGGGAAAACTATTACCCTAGAGGTTGAACCATCA 73512 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| | || ||||||| ||||||||||| | || ||||||||| Sbjct 73511 GATACCATTGAAAATGTCAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAA 73452 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| ||||||||||| ||||| | |||||||| ||||||||| Sbjct 73451 CAGCGTCTCATTTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAAC 73392 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||| || || Sbjct 73391 ATTCAGAAAGAATCGAC 73375 Score = 131 bits (144), Expect = 1e-25 Identities = 158/211 (75%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACG-GGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||| ||||| ||||| ||||| || || || || || || |||||||| || | Sbjct 73115 ATGCAGATCTTCGTAAAAACACTCACAAGGCAAGACCATTACACTTGAAGTTGAGCCCTC 73056 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| |||| ||| | ||| | |||| | ||||||||||| | || ||||||| Sbjct 73055 AGACACCATTGAGAATGTCAAAGCCAAAA-TCCAAGACAAAGAAGGCATTCCTCCAGATC 72997 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||||||| | || ||||| ||||||||||| ||||| | || || || ||||| | Sbjct 72996 AACAGCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGAACCTTGTCTGATTATA 72937 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGT 23819 |||| || ||||| || || | |||||||| Sbjct 72936 ACATTCAGAAAGAATCAACCCTGCATTTAGT 72906 >seq243752 Length=40230 Score = 138 bits (152), Expect = 8e-28 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || || || || || || || ||||| || | Sbjct 7827 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACACTTGAGGTTGAGCCCTCA 7768 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | |||| | || |||||||| | || |||||||| Sbjct 7767 GACACCATTGACAATGTCAAAGCTAAAA-TCCAAGATAAAGAAGGAATTCCACCAGATCA 7709 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || ||||| || |||||||| ||||| | |||||||| |||||||| Sbjct 7708 ACAGCGTCTTATTTTTGCTGGTAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAA 7649 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || ||||| || ||| | |||||||| Sbjct 7648 CATTCAGAAAGAATCGACACTGCATTTAGT 7619 Score = 109 bits (120), Expect = 4e-19 Identities = 142/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 23627 AAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA-AATA 23685 ||| || ||| || || || || || || || ||||| | | ||||| |||| ||| Sbjct 8039 AAAGCCACACTGGCAAGACCATTACACTTGAGGTTGAGCCATCAGACACCATTGACAATG 7980 Query 23686 TTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTT 23745 | ||| | |||| | ||||||||||| | || |||||||| |||||| | || ||| Sbjct 7979 TCAAAGCTAAAA-TCCAAGACAAAGAAGGAATTCCTCCAGATCAGCAGCGTCTCATCTTT 7921 Query 23746 GCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCC 23805 || ||||||||||| ||||| | ||||| || ||||||||||| || ||||| || Sbjct 7920 GCTGGCAAACAACTTGAAGATGGCCGCACATTGTCAGATTACAACATTCAGAAAGAATCA 7861 Query 23806 ACATTACATTTAGT 23819 ||| |||| || || Sbjct 7860 ACACTACACTTGGT 7847 >seq37740 Length=474 Score = 104 bits (114), Expect = 2e-17 Identities = 153/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| ||||| | || |||||||| || ||| | ||||| || || | Sbjct 305 ATGCAAATTTTCGTGAAAACATTGACTGGAAAAACTATTACTTTGGAAGTAGAAGCCTCT 246 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | || | || | || ||||||||||| | || |||||||| Sbjct 245 GATACGATTGAGAATGTGAAGGCTAAGA-TTCAAGACAAAGAAGGAATCCCACCAGATCA 187 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTTAGGCGATTAC 23787 ||||| | || ||||| || |||||||| ||||| | || | |||| | || ||| Sbjct 186 GCAGCGGCTCATCTTTGCAGGGAAACAACTTGAAGATGGTCGTACCCTTTCG--GACTAC 129 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGT 23819 ||||| ||||| || || || | ||| |||| Sbjct 128 AACATCCAAAAGGAATCGACTCTTCATCTAGT 97 >seq129645 Length=3385 Score = 87.8 bits (96), Expect = 1e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || |||||||| || ||||| || || || || ||||| | | Sbjct 572 ATGCAGATTTTTGTCAAGACCCTCACTGGGAAAACTATTACCCTAGAGGTTGAACCATCA 631 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| | || ||||||| ||||||||||| | || ||||||||| Sbjct 632 GATACCATTGAAAATGTCAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAA 691 Query 23731 CAGCGTTTAATAT 23743 |||||| | |||| Sbjct 692 CAGCGTCTCATAT 704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 336644396231708