Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq219765 152 1e-31 seq331401 131 4e-25 seq222708 131 4e-25 seq302046 125 2e-23 seq243752 122 2e-22 seq304478 107 5e-18 seq101527 105 2e-17 seq162806 96.9 8e-15 seq204639 89.7 1e-12 seq569 86.0 1e-11 >seq219765 Length=875325 Score = 152 bits (168), Expect = 1e-31 Identities = 163/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| ||||| |||||||| || | |||||||| | |||||| | |||||| Sbjct 73132 AGGACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCT 73191 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || ||||| ||||| || || ||||| || || ||||| ||||| |||||| Sbjct 73192 TCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCT 73251 Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||| ||| || || ||| ||| ||||||||||||| || || || | || || || Sbjct 73252 TGGAT-TTTGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGT 73310 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| || | ||||||| ||| | ||||| Sbjct 73311 CTTGCCTGTGAGTGTTTTTACGAAGATCTGCAT 73343 Score = 125 bits (138), Expect = 2e-23 Identities = 153/205 (75%), Gaps = 3/205 (1%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || || |||||||| || | || ||||| | ||| |||| |||||||| || || Sbjct 72912 TGCAGGGTTGATTCTTTCTGAATGTTATAATCAGACAAGGTTCGGCCATCTTCAAGTTGT 72971 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| ||||| || || ||||| || || ||||| ||||| ||||||||||| ||| Sbjct 72972 TTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGAT-TTT 73030 Query 225631 TGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCC-CG 225688 || || ||| || ||||||||||||| || || || | || || |||||||| | Sbjct 73031 GGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTCTTGCCTTG 73090 Query 225689 TCAAAGTTTTTATGAACACTTGCAT 225713 | | ||||||| ||| | ||||| Sbjct 73091 TGAGTGTTTTTACGAAGATCTGCAT 73115 >seq331401 Length=13670 Score = 131 bits (144), Expect = 4e-25 Identities = 140/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 7556 TTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGG 7615 |||| || ||| || |||| || ||||| ||| |||| ||||| ||| | ||||| || Sbjct 10619 TTTATAATGTTGTTGTTACAGCTCATGCTTTTATTATAATTTTTTTTATAGTTATACCTA 10678 Query 7616 TTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGG 7675 | || || || ||||| || |||||| | ||||||||| | ||||||||||| ||||| Sbjct 10679 TAATAATTGGTGGTTTTGGTAATTGAATGGTTCCTTTATTAATTGGTGCTCCAGATATAA 10738 Query 7676 CTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTAGGGT 7735 |||||| || | || ||||| |||||||||||| |||||||| || || || || Sbjct 10739 GTTTTCCTCGGATAAATAATATGTCTTTTTGATTACTTCCGCCTTCATTTATTTTATTGT 10798 Query 7736 TGGTA 7740 | ||| Sbjct 10799 TAGTA 10803 Score = 120 bits (132), Expect = 7e-22 Identities = 92/108 (85%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| ||| |||||||||||||| || ||||||||||| || | |||||||| ||||| | Sbjct 11191 ATACTTCTGGATGACCAAAAAACCAAAATAAATGTTGGTATAAAATAGGATCACCTCCTC 11132 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774 ||| ||||||||||| |||||||||||||||| ||| ||||| |||| Sbjct 11131 CTGCAGGATCAAAAAAACTAGTATTAAAATTTCGATCTGTTAATAACA 11084 Score = 89.7 bits (98), Expect = 1e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 371400 CATATTAAATATCGTAGTAATAAAGTTTATAGCGCCTAGAAGAGAAGATATACCTGCAAG 371459 ||||||||| || ||||||||||| || ||||| |||| || ||| ||| ||||| | Sbjct 10974 CATATTAAAAATTGTAGTAATAAAATTAATAGCACCTAAAATTGAACTTATTCCTGCTAA 10915 Query 371460 ATGTAAACTAAATATTGCTAAATCGACGGAACCGCCGGAGTGAGCTACAATAGAACTTAA 371519 ||||||| ||| || |||||||| || ||| | || ||||| | | | |||||| Sbjct 10914 ATGTAAAGAAAAAATAGCTAAATCCACAGAAGCACCACCATGAGCAATAGGACCACTTAA 10855 Query 371520 CGGCGGGTAAACTGTTCAGCCGGT 371543 || || || || ||||| || || Sbjct 10854 GGGAGGATATACAGTTCAACCTGT 10831 >seq222708 Length=1886 Score = 131 bits (144), Expect = 4e-25 Identities = 134/174 (77%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 7556 TTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGG 7615 |||| || ||| || |||| || ||||| ||| |||| ||||| ||| | ||||| || Sbjct 1593 TTTATAATGTTGTTGTTACAGCTCATGCTTTTATTATAATTTTTTTTATAGTTATACCTA 1652 Query 7616 TTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGG 7675 | || || || ||||| ||||||||| | || |||||| | ||||||||||| ||||| Sbjct 1653 TAATAATTGGTGGTTTTGGAAATTGAATGGTCCCTTTATTAATTGGTGCTCCAGATATAA 1712 Query 7676 CTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTC-CTTATTT 7728 |||||| | | || |||||| |||||||||||| |||||||| |||||| Sbjct 1713 GTTTTCCTCGAATGAATAATATATCTTTTTGATTACTTCCGCCTTCATTTATTT 1766 >seq302046 Length=14815 Score = 125 bits (138), Expect = 2e-23 Identities = 133/174 (76%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 7556 TTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGG 7615 |||| || ||| || |||| || ||||| ||| |||| ||||| ||| | ||||| || Sbjct 348 TTTATAATGTTGTTGTTACAGCTCATGCTTTTATTATAATTTTTTTTATAGTTATACCTA 407 Query 7616 TTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGG 7675 | || || || ||||| || |||||| | |||||||| | ||||||||||| ||||| Sbjct 408 TAATAATTGGTGGTTTTGGTAATTGAATGATTCCTTTATTAATTGGTGCTCCAGATATAA 467 Query 7676 CTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTC-CTTATTT 7728 |||||| || | || ||||| |||||||||||| |||||||| |||||| Sbjct 468 GTTTTCCTCGGATAAATAATATGTCTTTTTGATTACTTCCGCCTTCATTTATTT 521 Score = 118 bits (130), Expect = 3e-21 Identities = 88/103 (85%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| ||| |||||||||||||| || |||||||||||||| | |||||||| || || | Sbjct 918 ATACTTCTGGATGACCAAAAAACCAAAATAAATGTTGATATAAAATAGGATCACCCCCTC 859 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||| ||||||||||| |||||||||||||||| ||| ||||| Sbjct 858 CTGCAGGATCAAAAAAACTAGTATTAAAATTTCGATCTGTTAA 816 >seq243752 Length=40230 Score = 122 bits (134), Expect = 2e-22 Identities = 142/189 (75%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | || || || |||||||| || | |||||||| | |||||| | |||||| Sbjct 7616 AGGACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCT 7675 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || ||||| || ||||| || ||||| || || ||||| ||||| || ||| Sbjct 7676 TCAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGTGGAATTCCTTCTTTATCT 7735 Query 225622 TGGATCTTTTGCTTC-ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||| ||| |||| ||| || ||||||||||||| || || || | || || || Sbjct 7736 TGGAT-TTTAGCTTTGACATTGTCAATGGTGTCTGAGGGCTCAACCTCAAGTGTAATGGT 7794 Query 225681 CTTGCCCGT 225689 |||||| || Sbjct 7795 CTTGCCAGT 7803 Score = 118 bits (130), Expect = 3e-21 Identities = 141/189 (75%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| || || |||||||| || | |||||||| | ||| || | |||||| Sbjct 7844 AGGACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCTGACAATGTGCGGCCATCT 7903 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || ||||| ||||| || || || || || || ||||| ||||| |||||| Sbjct 7904 TCAAGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCT 7963 Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||| ||| || || ||| || ||||||||||| | || || || | || || || Sbjct 7964 TGGAT-TTTAGCTTTGACATTGTCAATGGTGTCTGATGGCTCAACCTCAAGTGTAATGGT 8022 Query 225681 CTTGCCCGT 225689 |||||| || Sbjct 8023 CTTGCCAGT 8031 >seq304478 Length=506 Score = 107 bits (118), Expect = 5e-18 Identities = 102/129 (79%), Gaps = 1/129 (1%) Strand=Plus/Plus Query 7735 TTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCT 7794 |||||||| ||| | |||| ||| ||||||||||||| ||||||||||| | | Sbjct 215 TTGGTAAGGTTCCTCGCGTATCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGTC 274 Query 7795 TCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTTA-CG 7853 |||||| || |||||||||| ||||||||||||||| | | |||||||| || ||| || Sbjct 275 CCCGTCAATTCCTTTGAGTTTCAACCTTGCGGTCGTACTCCCCAGGTGGATTACTTATCG 334 Query 7854 CGTTAGCTT 7862 | || |||| Sbjct 335 CTTTCGCTT 343 >seq101527 Length=647993 Score = 105 bits (116), Expect = 2e-17 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||| ||||||||||| || |||||||| || || || || ||||||| |||||| Sbjct 314076 GAAAATTTGTCCATCAGTAATTGAAATAACATTAGTTGGAATGTATGCAGAAATATCACC 314135 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATTTT 4582 |||||| ||||| | | |||||||| || | ||| ||||| ||| |||||| Sbjct 314136 TGCTTGCGTTTCAATGATTGGTAAGGCGGTAATTGAACCACCTCCATAATTTT 314188 Score = 104 bits (114), Expect = 6e-17 Identities = 100/127 (79%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 7737 GGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTTC 7796 |||||| ||||| ||||| || ||||||||||||| ||||||||||| | | | Sbjct 162610 GGTAAGGTTCTTCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGTCCC 162669 Query 7797 CGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGCG 7855 ||||| || |||||||||| | |||||| |||| |||||||| ||| || || ||||| Sbjct 162670 CGTCAATTCCTTTGAGTTTCACTCTTGCGAGCGTACTACTCAGGCGGAGTACTTAACGCG 162729 Query 7856 TTAGCTT 7862 ||||||| Sbjct 162730 TTAGCTT 162736 >seq162806 Length=55273 Score = 96.9 bits (106), Expect = 8e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| || ||||||||||| |||||||| ||||| || ||||| || ||||| |||||||| Sbjct 31237 GAAAATCTGACCATCAGTGATAGAGATGACATTAGTTGGGATGTAGGCAGAGACATCACC 31178 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCA 4575 ||||||||||| | || || | ||||| | || ||||||||| Sbjct 31177 AGCTTGTGTTTCAATGACTGGGAGTGCTGTCAAGGAACCACCACCA 31132 >seq204639 Length=2252 Score = 89.7 bits (98), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 || ||||| ||||| || ||||| |||| |||||| || ||||||||||||| |||||| Sbjct 1225 AAAATTTGGCCATCTGTTATAGAAATAAGATTTGTTGGTATATAAGCAGAAATATCACCA 1166 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCA 4569 ||||| ||||| || | || || || |||| ||| ||| Sbjct 1165 GCTTGAGTTTCAACTATTGGCAATGCCGTTAATGAACCA 1127 >seq569 Length=149216 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| || ||||||||||| |||||||| ||||| || ||||| || ||||| |||||||| Sbjct 44575 GAAAATCTGACCATCAGTGATAGAGATGACATTAGTTGGGATGTAGGCAGAGACATCACC 44516 Query 4530 TGCTTGTGTTTC 4541 ||||||||||| Sbjct 44515 AGCTTGTGTTTC 44504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1187467622712294