Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq168112 158 2e-33 seq14293 136 6e-27 seq286706 89.7 7e-13 >seq168112 Length=81752 Score = 158 bits (174), Expect = 2e-33 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 47013 CAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAA 47072 |||||| ||||||||||| |||||||| |||||||| ||||||| ||| ||| ||||| Sbjct 32875 CAAATTTTCATTCACTATCCCATCACTTGCAGCAAAGAATGCCAGTACGTGTGAGATAAA 32816 Query 47073 ATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTC 47132 || ||||| || | |||| || | ||||| || | |||||| || | || || || Sbjct 32815 ATGCTTTTCTTCTGGTTTCAGCTTCTCCCAGTGATCAAGATCTTTAGACAAGTCCACCTC 32756 Query 47133 TTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTG 47192 ||| |||||||||||||| || || |||||||| ||||| | ||| || ||| | || || Sbjct 32755 TTCTGCTGTCCAGAATGATGCTTCAGCTTTTTTGTACATCTGCCAAATGTCATGGTACTG 32696 Query 47193 GATCGGAAAAATAACAAATC 47212 || ||||| | |||||||| Sbjct 32695 AATTGGAAATAAAACAAATC 32676 Score = 114 bits (126), Expect = 2e-20 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 46435 TTTTTAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATC 46494 |||| | ||||||||||| | |||||| || || || ||||| ||||| | ||||| Sbjct 34794 TTTTCACATCCTAATTCTACCAGCAGTCTGTCGGCCACAAATTCAATATATTTCCTCATC 34735 Query 46495 ATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCA 46554 | |||||| |||||||| || | ||||| |||| || || |||||||||||||| ||| Sbjct 34734 AGTTCACAGTTCATTCCAATCAAATTGACGGGTAAGGCATCTGTAAGAAACTCTTGCTCA 34675 Query 46555 ATAGTGACAGCATC--CGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCA 46612 || || |||||||| ||| | ||| | ||| ||| | ||| | || | Sbjct 34674 ATGGTTACAGCATCTGTGATGATTTCGTAAATTCTG--GCCTGAGAAGGTTTGTTCACTA 34617 Query 46613 AATGTTTAAACATTAAACATGCAAAATCACAATG 46646 ||||| ||||||| || || ||||| ||||| || Sbjct 34616 AATGTCTAAACATCAAGCAAGCAAAGTCACAGTG 34583 Score = 105 bits (116), Expect = 9e-18 Identities = 158/224 (71%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 ||||| | ||| || | || || |||||| || || ||||||| || ||||| || Sbjct 34280 TCATCACGACTGATAAGCTCATTGCTAAATGTTAGGCCTGGCATTATGCCCCGCTTCTTC 34221 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 | ||| || || || || || || ||||| || ||||||||||| ||||| || || || Sbjct 34220 AACCAGAAAATGGCAGCAAACGAGCCAGAGAAAAATATGCCTTCCACAGCAGCAAAAGCC 34161 Query 46774 ACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACCTTTGAGCCCAATCAGCC 46830 |||| ||||| | ||| | || | || ||||||| | ||||||||||| Sbjct 34160 ACAACCCTCTCACTGTATGGGTGTTCGTGATCCCCAATCCACTTCATGGCCCAATCAGCT 34101 Query 46831 TTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGaaa 46874 || || | ||||| |||| ||| || || |||||||| | ||| Sbjct 34100 TTCTTTGTAACACAGGGCAGTGTCTCAATGGCATTAAACAAAAA 34057 >seq14293 Length=520737 Score = 136 bits (150), Expect = 6e-27 Identities = 168/227 (74%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| || ||||||||||| | | ||||||||||| || |||||||| || | | Sbjct 326125 TCAAATTCTTCACCCCAAACATCGGCAAGCCCAGGACATTCGTTAGGACACATTAAAGTC 326184 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || || ||| |||| ||| || ||| ||||| ||||| ||||| || || || Sbjct 326185 CAGTCGGCATTCTCCTCAACACGGCGCATGAAGAGGTCAGGAATCCACAGGGCGTAGAAA 326244 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTT-TTTAAGATCTAGGAACTCCAT 76698 ||||| | || || ||||||| || || ||||| || |||||| || || ||||| | Sbjct 326245 AGATCCCTGGCTCGTTGTTCTTCTTTACCAGTATTTTTCTTTAAG-TCGAGAAACTCAAA 326303 Query 76699 AATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTC 76745 || ||| | |||||||||||||| ||| || || | | | || |||| Sbjct 326304 AACATCTGCATGCCATGGTTCTAAATAGATAGCAAAAGCTCCTGGTC 326350 Score = 111 bits (122), Expect = 2e-19 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 75704 AGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTG 75763 |||||| |||| ||||| || || ||||| ||||| || | | || |||||||| ||| Sbjct 324721 AGATGATGATTGACAATCTGGAACTCTCCCGACAAAACACGCCTAGAATAAATATTGCTG 324780 Query 75764 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATA 75823 || || | || | || || |||||||| | ||||||||||||||| || || ||||| Sbjct 324781 GTGTAAGCCTCTATGGACTCGTTGTTTCCAAGAATTTGAGCAGTTGAGGCTGTAGGCATT 324840 Query 75824 GGTGCCACCAATAAACTATTTCTGAGACCAT 75854 || |||| || | ||| ||||||| ||||| Sbjct 324841 GGAGCCATCAGCAGACTGTTTCTGACACCAT 324871 Score = 89.7 bits (98), Expect = 7e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 75959 TATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAA 76018 || ||||| || | || | ||| ||||| || || ||||| || || || || | | Sbjct 402231 TAGGTTTCATAGGGGCCATACTTCTCAGCAAGCTCACAACTAGCATCCAAGGCTGCAAAG 402290 Query 76019 TAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAA 76078 ||||| ||||| || || | || || || | || || || | || ||||| || ||| Sbjct 402291 TAAATAGTTTCAAATATTTCTTTGTTCAGCTGTTTGGCCTCGGGGCTGTCAAATGGGTAA 402350 Query 76079 TGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTC 76138 | | | || || ||||||||||| || ||||| |||| ||||| || | ||| || Sbjct 402351 CGCATCAAGATGAAAGCATCTGCTAGACCTTGAACACCAAGTCCAATCGGACGGTGTTTC 402410 Query 76139 TTATTGGAAATTTCAGC 76155 || ||||||||||| || Sbjct 402411 TTGTTGGAAATTTCTGC 402427 Score = 86.0 bits (94), Expect = 9e-12 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| | || |||| ||||| | || ||||| |||| ||||||||||| | | Sbjct 405633 TCAAATTCTTGACCAAAAACCTCATCAAGCCCTGGACACTCATAAGGACACATCAAAGTC 405692 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || ||| |||| | | || || ||| ||||| ||||| | ||| || ||| Sbjct 405693 CAATCATCATCGGCTTCGACTCGACGCATGAAGAGGTCAGGAACCCAAAGTGCATAGGCC 405752 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 |||| | ||| |||||| || || ||||| || || | || | ||||| | | Sbjct 405753 AGATTCTTTGCTCTCATTTCTTCTTTGCCAGTATTTTTCTTTAACTCCAAAAACTCAAAA 405812 Query 76700 ATATCAGAATGCCATGGTTCTA 76721 || |||| |||||||||||||| Sbjct 405813 ATGTCAGGATGCCATGGTTCTA 405834 >seq286706 Length=35893 Score = 89.7 bits (98), Expect = 7e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 170072 TGGTTTTAAAAGATATTAATGGTATATATGAGCCAGGAAAACGTAGATGGCTTAAAATAA 170131 ||||| |||| | || | |||| ||||| |||||||||||| ||||| ||||||| Sbjct 2846 TGGTTATAAATTACTTTCAGAGTATTTATGAACCAGGAAAACGTCATTGGCTGAAAATAA 2787 Query 170132 AGAGAGACTACTTGAATGAGGGTTCGATGGCGGATTCTGCAGATTTAGTAGTATTGGGGG 170191 ||| ||| || | |||| || ||||| || || |||||||| || ||| | || | Sbjct 2786 AGAAAGATTATCTCCATGATGGAAGTATGGCTGACTCAGCAGATTTGGTTGTACTTGGAG 2727 Query 170192 CATATTATGGAAAAGGAACAAAGGGTGGA 170220 |||||||||| | |||| || ||| || Sbjct 2726 CATATTATGGCACTGGAAATAAAGGTAGA 2698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709981060336320