Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq243752 134 3e-26 seq219765 134 3e-26 seq37740 127 5e-24 >seq243752 Length=40230 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||| || || || ||||| || ||||||||||| | ||||| | |||||| Sbjct 7616 AGGACTAAATGCAGTGTCGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCT 7675 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || || ||||| | ||| || || | | |||||||| || ||| Sbjct 7676 TCAAGTTGTTTACCAGCAAAAATAAGACGCTGTTGATCTGGTGGAATTCCTTCTTTATCT 7735 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| ||||||| | || | | ||||||| ||| || ||||| ||||| || Sbjct 7736 TGGATTTTAGCTTTGACATTGTCAATGGTGTCTGAGGGCTCAACCTCAAGTGTAATGGTC 7795 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| || |||| |||||| Sbjct 7796 TTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 7827 Score = 107 bits (118), Expect = 4e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | || || || || ||||| || ||||||||||| | || || | |||||| Sbjct 7844 AGGACCAAGTGTAGTGTTGATTCTTTCTGAATGTTGTAATCTGACAATGTGCGGCCATCT 7903 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || ||||| || | |||||| || | | |||||||| || ||| Sbjct 7904 TCAAGTTGTTTGCCAGCAAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCT 7963 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| ||||||| | || | | ||||||| ||| || ||||| ||||| || Sbjct 7964 TGGATTTTAGCTTTGACATTGTCAATGGTGTCTGATGGCTCAACCTCAAGTGTAATGGTC 8023 Query 152073 TTGCCCGTG 152081 ||||| ||| Sbjct 8024 TTGCCAGTG 8032 >seq219765 Length=875325 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | || ||||| || ||||| || ||||||||||| | ||||| | |||||| Sbjct 73132 AGGACCAAGTGCAGAGTTGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCT 73191 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || ||||| || | ||| || || | | || ||||| || ||| Sbjct 73192 TCAAGTTGTTTGCCAGCAAAGATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCT 73251 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| ||||||| | || | | ||||||| ||| |||||||| ||||| || Sbjct 73252 TGGATTTTGGCTTTGACATTTTCAATGGTGTCTGAGGGCTCAACTTCAAGTGTAATGGTC 73311 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| || || ||||||| |||||| Sbjct 73312 TTGCCTGTGAGTGTTTTTACGAAGATCTGCAT 73343 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | || ||||| || ||||| || ||||||||||| | ||||| | |||||| Sbjct 73360 AGGACCAAGTGCAGAGTCGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCATCT 73419 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || || || || | ||| || || | | || ||||| || ||| Sbjct 73420 TCAAGTTGTTTGCCAGCAAAAATGAGACGCTGTTGATCTGGAGGAATGCCTTCTTTGTCT 73479 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||||||| |||||| | || | | | ||||| || || || || ||||||||| Sbjct 73480 TGAATTTTTGCCTTGACATTTTCAATGGTATCTGATGGTTCAACCTCTAGGGTAATAGTT 73539 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| || || | |||||| Sbjct 73540 TTCCCAGTGAGGGTCTTGACAAAAATCTGCAT 73571 >seq37740 Length=474 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || ||||||||||| || || |||||||||||||| || | | || | ||||| Sbjct 93 GAGCACTAGATGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGAAAGGGTACGACCATC 152 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || |||||| || ||||| |||| |||||| || | | ||||||||| || || Sbjct 153 TTCAAGTTGTTTCCCTGCAAAGATGAGCCGCTGCTGATCTGGTGGGATTCCTTCTTTGTC 212 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 |||||| || || ||| |||| | | || || |||||||| | ||||||||| Sbjct 213 TTGAATCTTAGCCTTCACATTCTCAATCGTATCAGAGGCTTCTACTTCCAAAGTAATAGT 272 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || | || |||||||| | ||||| Sbjct 273 TTTTCCAGTCAATGTTTTCACGAAAATTTGCAT 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1148921589986071