Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq56145 178 2e-39 seq175989 82.4 9e-11 >seq56145 Length=302 Score = 178 bits (196), Expect = 2e-39 Identities = 220/301 (73%), Gaps = 0/301 (0%) Strand=Plus/Plus Query 169749 CTCCCGTTGCGGCAGCCTCCGCTGTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCT 169808 |||| ||||| || || | ||||||||| || | ||||| |||| ||||| |||| Sbjct 1 CTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCT 60 Query 169809 CTGACGCTATGCCTCTGGGTATCTCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTG 169868 |||| | ||||||| | || || || || || || |||| ||| | || ||||| || | Sbjct 61 CTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAG 120 Query 169869 AGCACAACATCCTCATGCACCCCTTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGT 169928 ||||||||||||| |||||||| || |||||||| || || || || || || || || | Sbjct 121 AGCACAACATCCTTATGCACCCATTTCACATGCTAGGCGTAGCTGGTGTATTCGGCGGTT 180 Query 169929 CTCTGTTTAGCGCGATGCACGGTAGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCG 169988 | || || || || ||||| ||| | || || || ||| | || | |||||||| | Sbjct 181 CCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAG 240 Query 169989 AGAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCG 170048 | || || || || | ||||||| ||||||||||||||||| || || || |||| Sbjct 241 AAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAAGAAACTTATAATATCG 300 Query 170049 T 170049 | Sbjct 301 T 301 >seq175989 Length=232 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 165487 TGGGAGATTAGCTCAGC-GGTAGAGCACCTCGTTTACACCGAGATTGTCGGGGGTTCGAT 165545 |||| |||||||||||| |||||||||| ||||||||||||| || ||||| ||||| | Sbjct 223 TGGGTGATTAGCTCAGCTGGTAGAGCACTTCGTTTACACCGAAATGGTCGGCGGTTCAAA 164 Query 165546 CCCCTCATCTCCCACTC 165562 || |||| ||||||| Sbjct 163 TCCGTCATTACCCACTC 147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589745210725520