Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq37740 150 4e-31 seq219765 143 6e-29 seq243752 129 1e-24 seq129645 91.5 4e-13 seq642 84.2 5e-11 >seq37740 Length=474 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||||||||| | || |||||||| || || | || || ||| ||| || Sbjct 302 CAAATTTTCGTGAAAACATTGACTGGAAAAACTATTACTTTGGAAGTAGAAGCCTCTGAT 243 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || || |||||||| ||||||||||||||||| || || ||||| Sbjct 242 ACGATTGAGAATGTGAAGGCTAAGATTCAAGACAAAGAAGGAATCCCACCAGATCAGCAG 183 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || ||||| || |||||||| | || ||| | || || ||| || Sbjct 182 CGGCTCATCTTTGCAGGGAAACAACTTGAAGATGGTCGTACCCTTTCGGACTACAACATC 123 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| ||||| || || ||||| || Sbjct 122 CAAAAGGAATCGACTCTTCATCTAGT 97 Score = 111 bits (122), Expect = 4e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| || || || ||||| ||||||||||| || ||||||||||| || || ||| Sbjct 473 GACACAATTGAAAATGTCAAGGCTAAGATTCAGGATAAGGAAGGAATCCCACCAGATCAG 414 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 |||||||| || || ||||| || ||||| || ||||| | || ||| | || || ||| Sbjct 413 CAACGACTCATTTTTGCCGGCAAGCAGCTTGAGGATGGCCGTACCCTTTCTGACTACAAC 354 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || ||||| || || ||||| || Sbjct 353 ATCCAGAAGGAATCCACCCTCCATCTGGT 325 >seq219765 Length=875325 Score = 143 bits (158), Expect = 6e-29 Identities = 156/203 (77%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACA-GGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGA 177982 || || ||||| ||||| |||||| || || || || || || || || || |||||| Sbjct 73112 CAGATCTTCGTAAAAACACTCACAAGGCAAGACCATTACACTTGAAGTTGAGCCCTCAGA 73053 Query 177983 CACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 |||||| ||||| |||||| || || || ||||||||||| || ||||| || || || Sbjct 73052 CACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAACA 72993 Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC-GATTATAACG 178101 || || ||||| || || ||||| || |||||||| | || |||| | ||||||||| Sbjct 72992 GCGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGAAC-CTTGTCTGATTATAACA 72934 Query 178102 TCCAAAAAGAATCAACACTGCAT 178124 | || ||||||||||| |||||| Sbjct 72933 TTCAGAAAGAATCAACCCTGCAT 72911 Score = 141 bits (156), Expect = 2e-28 Identities = 155/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| |||||||| || || || || || || || || ||||||| Sbjct 73340 CAGATCTTCGTAAAAACACTCACAGGCAAGACCATTACACTTGAAGTTGAGCCCTCAGAC 73281 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || |||||| || || || ||||||||||| || ||||| || || || Sbjct 73280 ACCATTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAACAG 73221 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || ||||| || |||||||| | ||| | | ||||| ||| | Sbjct 73220 CGTCTCATCTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAACATT 73161 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||||||||| ||||| |||| Sbjct 73160 CAGAAAGAATCAACTCTGCA-CTTG 73137 Score = 136 bits (150), Expect = 9e-27 Identities = 154/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || ||||| || ||||| || ||||| ||||| ||| ||||| Sbjct 73568 CAGATTTTTGTCAAGACCCTCACTGGGAAAACTATTACCCTAGAGGTTGAACCATCAGAT 73509 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| ||| ||||| ||||||||||| || ||||| || || || Sbjct 73508 ACCATTGAAAATGTCAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAACAG 73449 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || ||||| || |||||||| | ||| | | ||||| ||| | Sbjct 73448 CGTCTCATTTTTGCTGGCAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAACATT 73389 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || |||||||| || ||||| |||| Sbjct 73388 CAGAAAGAATCGACTCTGCA-CTTG 73365 >seq243752 Length=40230 Score = 129 bits (142), Expect = 1e-24 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || || || || || ||||| || ||||||| Sbjct 7824 CAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACACTTGAGGTTGAGCCCTCAGAC 7765 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || |||||| || || || || ||||||||||| || || || || || Sbjct 7764 ACCATTGACAATGTCAAAGCTAAAATCCAAGATAAAGAAGGAATTCCACCAGATCAACAG 7705 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || || ||||| || |||||||| | ||| | | ||||| ||| | Sbjct 7704 CGTCTTATTTTTGCTGGTAAACAACTTGAAGATGGCCGCACTTTGTCAGATTACAACATT 7645 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || |||||||| ||||||||| Sbjct 7644 CAGAAAGAATCGACACTGCAT 7624 Score = 123 bits (136), Expect = 6e-23 Identities = 139/185 (75%), Gaps = 1/185 (1%) Strand=Plus/Minus Query 177944 CACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACA 178003 ||| || || || || || || ||||| || ||||||||||| || || |||||| Sbjct 8032 CACTGGCAAGACCATTACACTTGAGGTTGAGCCATCAGACACCATTGACAATGTCAAAGC 7973 Query 178004 AAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAA 178063 || || || |||||||||||||| ||||| || ||||| || || ||||| || || || Sbjct 7972 TAAAATCCAAGACAAAGAAGGAATTCCTCCAGATCAGCAGCGTCTCATCTTTGCTGGCAA 7913 Query 178064 ACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123 ||| || |||||||| | || | | ||||| ||| | || |||||||||||||| || Sbjct 7912 ACAACTTGAAGATGGCCGCACATTGTCAGATTACAACATTCAGAAAGAATCAACACTACA 7853 Query 178124 TCTTG 178128 |||| Sbjct 7852 -CTTG 7849 >seq129645 Length=3385 Score = 91.5 bits (100), Expect = 4e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || ||||| || ||||| || ||||| ||||| ||| ||||| Sbjct 575 CAGATTTTTGTCAAGACCCTCACTGGGAAAACTATTACCCTAGAGGTTGAACCATCAGAT 634 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| ||| ||||| ||||||||||| || ||||| || || || Sbjct 635 ACCATTGAAAATGTCAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAACAG 694 Query 178044 CGACTTAT 178051 || || || Sbjct 695 CGTCTCAT 702 >seq642 Length=496311 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| || ||||| || || |||||||| ||||| ||| || || Sbjct 67125 CAGATCTTCGTGAAAACCCTAACAGGCAAGACTATCACCCTAGAGGTTGAACCTTCTGAT 67066 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 ||||| || || |||||| || ||||| ||||||||||| Sbjct 67065 ACCATTGAAAATGTCAAAGCTAAAATTCAAGACAAAGAAGG 67025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1198620066668794