Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq40028 87.8 4e-12 seq9621 87.8 4e-12 seq113814 86.0 1e-11 seq110259 86.0 1e-11 seq102851 86.0 1e-11 seq81567 86.0 1e-11 seq79087 86.0 1e-11 seq66916 86.0 1e-11 seq62374 86.0 1e-11 seq43679 86.0 1e-11 seq33354 86.0 1e-11 seq22355 86.0 1e-11 seq13278 86.0 1e-11 >seq40028 Length=8367 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||||| |||| |||||| ||||||||||||||| Sbjct 2438 TGCCCGGCTAGCTCAGTCGGTAGAGCGTTGGACTCTTAATCCAACGGTCGTGGGTTCGAG 2379 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 2378 CCCCACGTTGGGC 2366 >seq9621 Length=30596 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||||| |||| |||||| ||||||||||||||| Sbjct 25753 TGCCCGGCTAGCTCAGTCGGTAGAGCGTTGGACTCTTAATCCAACGGTCGTGGGTTCGAG 25694 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 25693 CCCCACGTTGGGC 25681 >seq113814 Length=3186 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct 3113 GCCCGGCTAGCTCAGTCGGTAGAGCGTTGGACTCTTAATCCAACGGTCGTGGGTTCGAGC 3172 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3173 CCCACGTTGGGC 3184 >seq110259 Length=1145 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| |||| |||||| | |||||||||||||||| Sbjct 799 GCCCGGCTAGCTCAGTCGGTAGAGCGTTGGACTCTTAATCCGACGGTCGTGGGTTCGAGC 858 Query 165770 CCCACGATGGGC 165781 || ||| ||||| Sbjct 859 CCAACGTTGGGC 870 >seq102851 Length=2196 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct 925 GCCCGGCTAGCTCAGTCGGTAGAGCGTTGGACTCTTAATCCAACGGTCGTGGGTTCGAGC 984 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 985 CCCACGTTGGGC 996 >seq81567 Length=13968 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct 729 GCCCGGCTAGCTCAGTCGGTAGAGCGTTGGACTCTTAATCCAACGGTCGTGGGTTCGAGC 788 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 789 CCCACGTTGGGC 800 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct 1221 GCCCGGCTAGCTCAGTCGGTAGAGCGTTGGACTCTTAATCCCACGGTCGTGGGTTCGAGC 1280 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1281 CCCACGTTGGGC 1292 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct 2118 GCCCGGCTAGCTCAGTCGGTAGAGCGTTGGACTCTTAATCCAACGGTCGTGGGTTCGAGC 2177 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2178 CCCACGTTGGGC 2189 >seq79087 Length=656 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct 542 GCCCGGCTAGCTCAGTCGGTAGAGCGTTGGACTCTTAATCCAACGGTCGTGGGTTCGAGC 483 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 482 CCCACGTTGGGC 471 >seq66916 Length=1675 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct 364 GCCCGGCTAGCTCAGTCGGTAGAGCGTTGGACTCTTAATCCAACGGTCGTGGGTTCGAGC 305 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 304 CCCACGTTGGGC 293 >seq62374 Length=6233 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct 1870 GCCCGGCTAGCTCAGTCGGTAGAGCGTTGGACTCTTAATCCAACGGTCGTGGGTTCGAGC 1811 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1810 CCCACGTTGGGC 1799 >seq43679 Length=5778 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct 4853 GCCCGGCTAGCTCAGTCGGTAGAGCGTTGGACTCTTAATCCAACGGTCGTGGGTTCGAGC 4912 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4913 CCCACGTTGGGC 4924 >seq33354 Length=3466 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct 1036 GCCCGGCTAGCTCAGTCGGTAGAGCGTTGGACTCTTAATCCAACGGTCGTGGGTTCGAGC 977 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 976 CCCACGTTGGGC 965 >seq22355 Length=6492 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct 3516 GCCCGGCTAGCTCAGTCGGTAGAGCGTTGGACTCTTAATCCAACGGTCGTGGGTTCGAGC 3575 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3576 CCCACGTTGGGC 3587 >seq13278 Length=10697 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct 10030 GCCCGGCTAGCTCAGTCGGTAGAGCGTTGGACTCTTAATCCAACGGTCGTGGGTTCGAGC 10089 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 10090 CCCACGTTGGGC 10101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1056195711681570