Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq114236 161 9e-35 seq1613 145 7e-30 seq114234 143 2e-29 seq2597 93.3 4e-14 seq41383 91.5 1e-13 seq116056 84.2 2e-11 seq3604 84.2 2e-11 >seq114236 Length=889 Score = 161 bits (178), Expect = 9e-35 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| | ||||||| |||||||| | |||||||||||||| |||||||| |||| Sbjct 362 TACCTCCTCTCAATCTCAGAACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGC 421 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | | |||||| || || | || || || || |||||||||||||||||||||||| Sbjct 422 TNAGAGTGCGGCCGTCTTCCAATTGCTTGCCGGCAAAGATGAGACGCTGCTGATCGGGAG 481 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| |||||||| ||||| || || || | |||| ||||| | ||||| Sbjct 482 GAATGCCTTCCTTGTCCTGGATTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGA 541 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | |||| ||| | |||||||| |||| ||| || || || || ||||| Sbjct 542 CTTCGAGGGTAATAGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 590 Score = 100 bits (110), Expect = 2e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 118606 AGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCT 118665 ||||||||||||||||||||||||| ||||| |||||||| ||||| || || || | Sbjct 2 AGATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTCACAT 61 Query 118666 GTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 118725 |||| ||||| | |||||| |||| ||| | ||||| ||||||| ||| || | Sbjct 62 TATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTACCGGTCAAAGTCTTGA 121 Query 118726 CAAAAATCTGCAT 118738 | || || ||||| Sbjct 122 CGAAGATTTGCAT 134 >seq1613 Length=19885 Score = 145 bits (160), Expect = 7e-30 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||| ||||||||||||||||| ||||| | || || ||| || ||||| || || Sbjct 807 GTAGATTCTTTTTGAATGTTGTAGTCGCTAAGCGTACGGCCATCTTCCAGCTGCTTGCCG 748 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| |||||||||||||| ||||| ||||| ||||||||| || || || || Sbjct 747 GCGAAGATTAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATCTTCTGCTTG 688 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||||| | |||||||| | || | ||| || || || || ||| Sbjct 687 ACGTTATCGATGGTGTCCGAGGCTTCGACCTCAAGCGTGATCGTCTTTCCTGTGAGGGTT 628 Query 118722 TTTACAAAAATCTGCATG 118739 ||||| || || |||||| Sbjct 627 TTTACGAAGATTTGCATG 610 Score = 141 bits (156), Expect = 8e-29 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 118521 AATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGC 118580 |||| ||| |||||||| | || || || ||||| |||||||| ||||| | ||||| Sbjct 372 AATCGCAAGACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGG 313 Query 118581 GTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCC 118640 ||| || | || || |||||| ||||||||||||| ||||||||||| || || ||| Sbjct 312 CCATCTTCCAATTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGGATACCTTCC 253 Query 118641 TTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTC 118700 ||||| ||||| || || || | |||| |||||| | ||| ||||| | || Sbjct 252 TTGTCCTGGATTTTCTGCTTGACATTATCGATGGTGTCAGAAGCCTCAACCTCCAGAGTG 193 Query 118701 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | ||||| ||||| ||||| || ||||| || ||||| Sbjct 192 ATGGTTTTACCGGTAAGAGTCTTGACAAAGATTTGCAT 155 Score = 132 bits (146), Expect = 4e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 118523 TCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT 118582 ||||| |||||||| | ||||| |||||||| || ||||| || || | || || Sbjct 598 TCTCAGGACCAAGTGCAAAGTAGATTCTTTTTGGATATTGTAGTCACTGAGGGTACGGCC 539 Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642 |||||| | || || |||||| |||| ||||| |||||||| ||||| || || || || Sbjct 538 ATCCTCCAATTGCTTACCAGCGAAGATAAGACGTTGCTGATCAGGAGGAATCCCTTCTTT 479 Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702 || |||||| || || || | |||| |||||| | |||||| || | || | Sbjct 478 ATCCTGAATTTTCTGCTTGACATTATCGATGGTGTCGGAAGCCTCGACTTCAAGAGTAAT 419 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||||||||||| || || ||||||||||| Sbjct 418 GGTTTTTCCGGTCAGAGTCTTCACGAAAATCTGCAT 383 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || || || || |||||||| ||||| | ||||| |||||| Sbjct 135 ACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTCC 76 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | || || |||||| ||||||||||||||||||||||||| ||||| |||||||| Sbjct 75 AATTGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGG 16 Query 118650 ATTTTTTGTTTAAC 118663 ||||| || || || Sbjct 15 ATTTTCTGCTTCAC 2 >seq114234 Length=910 Score = 143 bits (158), Expect = 2e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 118523 TCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT 118582 ||| | |||||||| | |||||||||||||| |||||||| ||||| | |||||| Sbjct 287 TCTNAGNACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTGAGAGTGCGGCC 228 Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642 || || | || || || ||| ||||||||||||| ||||||||||| ||||| || || Sbjct 227 GTCTTCCAATTGCTTGCCGGCGAAGATGAGACGCTGTTGATCGGGAGGAATGCCTTCTTT 168 Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702 ||| ||| || || || || | || | |||||| | ||||||||| | || | Sbjct 167 ATCTTGAATCTTCTGCTTGACATTATCAATGGTGTCAGAAGCCTCGACCTCCAAAGTAAT 108 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| |||| |||||| || || || ||||| Sbjct 107 GGTTTTGCCTGTCAAAGTTTTGACGAAGATTTGCAT 72 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | |||||||||||||| |||||||| ||||| | |||||| ||| || Sbjct 736 ACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCTTCC 677 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | || || || || |||| |||||||| ||||||||||| ||||| || || ||| | Sbjct 676 AATTGCTTGCCGGCAAAGATCAGACGCTGTTGATCGGGAGGAATGCCTTCTTTATCTTGA 617 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || || | || | |||||| | ||||||||| | || | |||||| Sbjct 616 ATCTTCTGCTTGACATTATCAATGGTGTCAGAAGCCTCGACCTCCAAAGTAATGGTTTTG 557 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| |||||| || || || ||||| Sbjct 556 CCTGTCAAAGTTTTCACGAAGATTTGCAT 528 Score = 125 bits (138), Expect = 6e-24 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 118523 TCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT 118582 ||||| |||||||| | || || || || || |||||||| ||||| | || || Sbjct 515 TCTCAGGACCAAGTGCAAAGTNGANTCNTTNTGGATGTTGTAGTCGCTGAGNGTNCGGCC 456 Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642 || || | || || || || ||||||||||||||||||||||||| ||||| || || Sbjct 455 GTCNTCCAATTGCTTGCCNGCNAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCTTT 396 Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702 ||| |||| || || || | |||| ||||| | |||||| |||| ||| | Sbjct 395 GTCCTGGNTTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAAT 336 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||||||| ||| || || || || ||||| Sbjct 335 AGTTTTACCGGTCAAAGTNTTGACGAAGATTTGCAT 300 Score = 118 bits (130), Expect = 9e-22 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||| | || || |||||| ||||||||||||||||||||||||| |||||||||||| Sbjct 910 TCCTCCAATTGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGGAATGCCCTCCTTG 851 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || ||||| || || || | |||| ||||| | |||||| |||| ||| | Sbjct 850 TCCTGGATTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATA 791 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||||||| ||| || || || || ||||| Sbjct 790 GTTTTACCGGTCAAAGTCTTGACGAAGATTTGCAT 756 >seq2597 Length=9084 Score = 93.3 bits (102), Expect = 4e-14 Identities = 85/106 (80%), Gaps = 1/106 (1%) Strand=Plus/Plus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| |||||||| |||||||||||||| || |||| || | ||| || | Sbjct 3346 CAAGATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCACTCAAGGTTCTGCCATCTTCCA 3405 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCC 118636 || ||||||||| ||||||||||||||||||||||||| || || Sbjct 3406 ATTGCTTTCCAGCGAAGATGAGACGCTGCTGATCGGGAGGAATTCC 3451 >seq41383 Length=7190 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| |||||||||||||| || |||| || | ||| || | || |||||| Sbjct 755 GTAGACTCCTTTTGAATGTTGTAGTCACTCAAGGTTCTGCCATCTTCCAATTGCTTTCCA 814 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCC 118636 ||| ||||||||||||||||||||||||| || || Sbjct 815 GCGAAGATGAGACGCTGCTGATCGGGAGGAATTCC 849 >seq116056 Length=8111 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 133815 GCTAGATTACAAACGGCCGTCTCGTTCTCGTCGCAATACTGGACGATCTCGGCGCAGAGG 133874 || |||||||| |||||| ||||| || | | || | || ||||| | |||||| Sbjct 2055 GCGAGATTACACACGGCCACCTCGTCCTTGCTGGTGTATTCTACAATCTCAGTGCAGAGA 1996 Query 133875 TTGCTGCATTTGATGGTGCCCAAAtttttttGATTGCTAAAGTTATTGCAATGATCCTTG 133934 || || |||||| ||||||| || ||||||||| || |||||| || ||| Sbjct 1995 TTTGAGCTTTTGATCGTGCCCAGATCTTTTTGATTTGATTTTTTGTTGCAAGCGTCTTTG 1936 Query 133935 TATAGCATGTACGGCCCGCCGGTTTCGACGTTGGTCTCGACGAT 133978 || |||||||||||| |||||||||| | | ||||| ||| Sbjct 1935 TAGAGCATGTACGGCGTACCGGTTTCGATCTGCGACTCGATGAT 1892 >seq3604 Length=7407 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 133815 GCTAGATTACAAACGGCCGTCTCGTTCTCGTCGCAATACTGGACGATCTCGGCGCAGAGG 133874 || |||||||| |||||| ||||| || | | || | || ||||| | |||||| Sbjct 4489 GCGAGATTACATACGGCCACCTCGTCCTTGCTGGTGTATTCTACAATCTCAGTGCAGAGA 4430 Query 133875 TTGCTGCATTTGATGGTGCCCAAAtttttttGATTGCTAAAGTTATTGCAATGATCCTTG 133934 || || |||||| ||||||| |||||| ||||| || |||||| || ||| Sbjct 4429 TTCGAGCTTTTGATCGTGCCCAGATTTTTCTGATTTGATTTTTTGTTGCAAGCGTCTTTG 4370 Query 133935 TATAGCATGTACGGCCCGCCGGTTTCGACGTTGGTCTCGACGAT 133978 || |||||||||||| |||||||||| | | ||||| ||| Sbjct 4369 TAGAGCATGTACGGCGTACCGGTTTCGATCTGCGACTCGATGAT 4326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433195188104188