Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq114234 114 8e-21 seq1613 113 3e-20 seq114236 105 4e-18 >seq114234 Length=910 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG-- 34219 ||| || | || || || |||| ||| |||||| ||||| || |||||||||||| Sbjct 299 TCCACCTCTCANTCTNAGNACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCT 240 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279 || || || ||| |||| ||||| |||||||| ||||| ||||| ||||| || ||| Sbjct 239 GAGAG-TG-CGGCCGTCTTCCAATTGCTTGCCGGCGAAGATGAGACGCTGTTGATCGGGA 182 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339 || | || || || || ||||| ||||| | || | || | || | | ||| Sbjct 181 GGAATGCCTTCTTTATCTTGAATCTTCTGCTTGACATTATCAATGGTGTCAGAAGCCTCG 122 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || |||| || ||||||||||| || | |||||| || ||||| ||||| Sbjct 121 ACCTCCAAAGTAATGGTTTTGCCTGTCAAAGTTTTGACGAAGATTTGCAT 72 Score = 107 bits (118), Expect = 1e-18 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG-- 34219 ||| || | ||| || || |||| ||| |||||| ||||| || |||||||||||| Sbjct 755 TCCACCTCTCAGTCTGAGGACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCT 696 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279 || || || ||| | || ||||| |||||||| || || || || ||||| || ||| Sbjct 695 GAGAG-TG-CGGCCATCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGTTGATCGGGA 638 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339 || | || || || || ||||| ||||| | || | || | || | | ||| Sbjct 637 GGAATGCCTTCTTTATCTTGAATCTTCTGCTTGACATTATCAATGGTGTCAGAAGCCTCG 578 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || |||| || ||||||||||| || | ||||||||| ||||| ||||| Sbjct 577 ACCTCCAAAGTAATGGTTTTGCCTGTCAAAGTTTTCACGAAGATTTGCAT 528 Score = 102 bits (112), Expect = 5e-17 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || | ||| ||||| |||| ||| ||||| || || || |||||||||||| Sbjct 527 TCCACCTCTCAGTCTCAGGACCAAGTGCAAAGTNGANTCNTTNTGGATGTTGTAGTCGCT 468 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| |||| ||||| |||||||| || || ||||| |||||||| ||| || Sbjct 467 GAGNGTNCGGCCGTCNTCCAATTGCTTGCCNGCNAAGATGAGACGCTGCTGATCGGGAGG 408 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || || ||||| | || ||||| | || | || | || | | ||||| Sbjct 407 AATGCCTTCTTTGTCCTGGNTTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGAC 348 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || || ||||| ||||| | ||| || || ||||| ||||| Sbjct 347 TTCGAGGGTAATAGTTTTACCGGTCAAAGTNTTGACGAAGATTTGCAT 300 >seq1613 Length=19885 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || || || | |||| |||||| || |||||||||||| Sbjct 837 CCGCCTCGGAGACGAAGTACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGCTA 778 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| |||| | || |||| ||||||||| ||||| || || |||||||| || || Sbjct 777 AGCGTACGGCCATCTTCCAGCTGCTTGCCGGCGAAGATTAGACGCTGCTGATCTGGAGGA 718 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||||| | | | || | || | | |||||| Sbjct 717 ATGCCTTCCTTGTCTTGGATCTTCTGCTTGACGTTATCGATGGTGTCCGAGGCTTCGACC 658 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||| || || || ||||| ||||| || ||||| ||||| Sbjct 657 TCAAGCGTGATCGTCTTTCCTGTGAGGGTTTTTACGAAGATTTGCAT 611 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34181 ACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCC 34240 |||| ||| ||||| ||| || || |||||||||||| || ||| | || ||| Sbjct 363 ACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCTTCC 304 Query 34241 AACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCT 34300 || |||||||| ||||| ||||| ||||| || ||| || | | |||||||| Sbjct 303 AATTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGGATACCTTCCTTGTCCTGG 244 Query 34301 ATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTG 34360 || || ||||| | || | || | || | | || || |||| ||||||||||| Sbjct 243 ATTTTCTGCTTGACATTATCGATGGTGTCAGAAGCCTCAACCTCCAGAGTGATGGTTTTA 184 Query 34361 CCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| ||||| || |||||||| ||||| Sbjct 183 CCGGTAAGAGTCTTGACAAAGATTTGCAT 155 >seq114236 Length=889 Score = 105 bits (116), Expect = 4e-18 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234 ||||| |||| ||| |||||| ||||| || |||||||||||| || ||| || Sbjct 376 CTCAGAACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTNAGAGTGCGGCCG 435 Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG 34294 || ||||| |||||||| || || ||||| |||||||| ||| || | || |||||| Sbjct 436 TCTTCCAATTGCTTGCCGGCAAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTG 495 Query 34295 TCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATG 34354 || || || ||||| | || | || | || | | ||||| || | || || Sbjct 496 TCCTGGATTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATA 555 Query 34355 GTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| || | ||| || || ||||| ||||| Sbjct 556 GTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 590 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || | ||| || || |||| ||| ||||| ||| ||||| |||||||||||| Sbjct 591 TCCACCTCTCAGTCTGAGGACCAAGTGCAAAGTCGATTCCTTCTGGATGTTGTAGTCGCT 650 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| |||| ||||||||||| || ||||| || || || || || || || Sbjct 651 TAGGGTGCGGCCGTCTTCCAACTGCTTACCGGCGAAGATAAGACGTTGTTGATCTGGAGG 710 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || || || || ||||| |||| || | || | || | | ||||| Sbjct 711 AATGCCTTCTTTATCTTGAATCTTCGATTTTACATTTTCGATGGTGTCAGAAGCCTCGAC 770 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| ||||| ||||| | ||| || |||||||| ||||| Sbjct 771 CTCCAAAGTGATAGTTTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 818 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || | ||| || || |||| ||| ||||| ||| ||||| |||||||||||| Sbjct 135 TCCACCTCTCAGTCTGAGGACCAAGTGCAAAGTCGATTCCTTCTGGATGTTGTAGTCGCT 194 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| |||| ||||||||||| || ||||| || || || || || || || Sbjct 195 NAGGGTGCGGCCGTCTTCCAACTGCTTACCGGCGAAGATAAGACGTTGTTGATCTGGAGG 254 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || || || || ||||| |||| || | || | || | | ||||| Sbjct 255 AATGCCTTCTTTATCTTGAATCTTCGATTTTACATTTTCGATGGTGTCAGAAGCCTCGAC 314 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| ||||| ||||| | ||| || || ||||| ||||| Sbjct 315 CTCCANAGTGATAGTTTTACCGGTCAAAGTCTTGACNAAGATTTGCAT 362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322598959895840