Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq116056 288 9e-73 seq3604 284 1e-71 >seq116056 Length=8111 Score = 288 bits (318), Expect = 9e-73 Identities = 1180/1837 (64%), Gaps = 34/1837 (2%) Strand=Plus/Minus Query 36817 GCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAA 36876 |||| || |||| | ||||||||| || || || || || | |||| ||||||||| Sbjct 2946 GCCGGCTTCGTTCGAAGATAATACATCCCCGTCTTGAGTCCGACCTTCCACCCGTAAAAA 2887 Query 36877 TGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGACTT 36936 ||||| ||||||| || |||| |||| | | || | || ||| ||||||| Sbjct 2886 TGCATGCTGGTCAACTTGCCGTAGTTAGGCTCGGCGATGTGAATGTTCAAACTTTGACTT 2827 Query 36937 TGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCC 36996 || || || ||| | | |||||| ||||||| | || || || || |||||| Sbjct 2826 TGGTCGATGTACGGTGCCCGGTCGGCAGCCATTTTGATGATGTTCTTCTGCGAAATCTCC 2767 Query 36997 CAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCTAA---ATGTT--GAATAG 37051 || || || ||| | || || |||| || || ||||| | ||||| |||| | Sbjct 2766 CACACGGTACGATACAATTTCTTCATATCCTCAGG--AATCTGAGGGATGTTTTGAATCG 2709 Query 37052 AACCATTATGTAACAC--AATTGTATTCTTTATGTCATTATTCCACATATTTCTACTTAT 37109 |||| || | || | | || | ||||| |||| ||||| ||| ||| | | Sbjct 2708 AACCGTTGT-TAGCGATGAGCTGCAA-CTTTACATCATCGTTCCAGATACCTCTTTCTGT 2651 Query 37110 TAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGT 37169 | || | | || | ||||||||| ||| || || || || | || | || || Sbjct 2650 CAAATCCATGAGTAAACGCTGATTTACAATCTGGAATTCGCCGGACAGCACACGTCGCGT 2591 Query 37170 ATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGA 37229 || || |||||||| ||||| ||||||| |||||||||| | |||||||| || || Sbjct 2590 GTAAATGTTGCTAGTGTATGGCTCAATGGCTTCATTATTACCCAGTATTTGAGCAGTGGA 2531 Query 37230 TGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTT 37289 ||| || ||||| || |||| || || ||| | | ||| || | || || ||| Sbjct 2530 TGCTGTTGGCATCGGCGCTAACAGCAGAGAATTGCGTACTCCGTGCTTTTTGATCTTCTC 2471 Query 37290 TTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAG 37349 ||| | ||||||||| ||||| || ||| || ||||| |||||| |||| Sbjct 2470 TTTCAAAGACGCCCAATCCCACAAATCAGTGGGGGTCACGCCCCACAAATCATACTGTAA 2411 Query 37350 AATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAG 37409 ||||| || ||||| | | ||| ||||||| || ||| || || || Sbjct 2410 TTGACCTTGGCTGATAGGAGATCCCTCATAGCTCTCATACGGACCGCTCTCTTCCGCAAG 2351 Query 37410 TTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATAT 37469 ||||||| | | | || || |||| || || ||||| |||| | || | | Sbjct 2350 TTCGCAAGACGCTGTCAAAGCCGCGAAATAAATGGTCTCGAATATTTCAACGTTGAGCTT 2291 Query 37470 TTTTGCTTCTTCGCTATCGAATG-CATAGCCCAATAATATAAACACATCAGCCAAACCCT 37528 | || || ||| ||||||| ||| | ||| | ||||| | || |||| || | Sbjct 2290 CATGGCCTCGGGGCTGTCGAATGGCATT-CGCAACATGATAAAGGCGTCCGCCAGTCCTT 2232 Query 37529 GAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGAT 37588 | || || ||||| || || | || || | || || | || || ||| || | Sbjct 2231 GCACTCCAATACCGATCGGACGGTGCCTCATGTTCGAATTCCTCGCTTGAGGCACGGGGT 2172 Query 37589 AATAATTGATATCTATTATTTTATTTAGATT---TTTAACTAGTATTTTCGTAATTATTC 37645 | || ||||| || || ||||| || ||||| | | || | || | | | | Sbjct 2171 AGTAGTTGATGTCAATGATTTTGTTCAGATTCCGTGTGACGACC--TTGCACACGTCGTA 2114 Query 37646 TCAACTTGTCGAA--CATAAATACGTTA-TTATTAACAAATTTACTCAACGAAATAGATC 37702 ||| || | ||| |||| | | | || | || || ||| | || || Sbjct 2113 -CAATTTTTTGAAATCATACTTTCCATCGTTGGTTACGTATCGGGGCAATGCGATCGAAG 2055 Query 37703 CTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGAT 37762 | |||||||| || || || || || | | | | ||| || |||||| || ||||||| Sbjct 2054 CGAGATTACACACGGCCACCTCGTCCTTGCTGGTGTATTCTACAATCTCAGTGCAGAGAT 1995 Query 37763 TACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTAT 37822 | | | || || |||| || ||||||| |||||||| || |||| ||||| | Sbjct 1994 TTGAGCTTTTGATCGTGCCCAGATCTTTTTGATTTGATTTTTTGTTGCAAGCGTCTTTGT 1935 Query 37823 ATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTC 37882 | || || |||||||| || ||| || || | |||||| || | | ||||| || Sbjct 1934 AGAGCATGTACGGCGTACCGGTTTCGATCTGCGACTCGATGATGGCGTACCATAGTTTTT 1875 Query 37883 TTGCTTTAACGATCGCTTTAAtttttttCTTTG---TTTCGTA-TTCTATATATAATTTG 37938 ||||| ||| | || | | || || |||| || |||| || | || Sbjct 1874 GCGCTTT---GATTGTCTTCCTCGCTCTCCCTGCTTTTTCATACTTCTCG-TAGAGCTTA 1819 Query 37939 TTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGAC 37998 | ||| |||| || |||| ||| || ||| ||| || || | ||| ||| Sbjct 1818 TCAAACTCATCACCATATACGTCGACCAAACCTATCGCTTCATTGGGGCAAAATAGCGAC 1759 Query 37999 CATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAAT 38058 || || ||| |||| || |||| |||||| ||||| |||| ||| | || ||| | Sbjct 1758 CAATCCCCATTGCTTTCAACCCGTTTCATAAACAAATCCGGTATCCACATCGC-GTAGAA 1700 Query 38059 AAA-TCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAA 38117 || || | || |||| || || || |||||| | | || ||| || || Sbjct 1699 AAGGTCCCGTGCCCTTGATTCATCTTTGCCCGTGTTCTTTTTCGCGTCTAAAAAGTCAAA 1640 Query 38118 TATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCC 38177 | ||| || ||||| || || | || | || | ||| ||||| ||||||| ||| || Sbjct 1639 GACATCCGCATGCCACGGCTCGAGGTACACCGCGAATGCACCTGGCCTTTTATTACCGCC 1580 Query 38178 CTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGA 38237 || | | || | ||||||||||||| | | | ||| || | | ||| || || Sbjct 1579 TTGGTCTACGTAACGTGCTGTGTTATTATAAACACGCAGCATGGGCAAGAGACCGTTGGA 1520 Query 38238 TTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCC 38297 || ||||| | || | |||||| | || |||||| || || || |||||| Sbjct 1519 GTTTCCGTTGGTGCCTGCGATATAACTGCCGCTAGCTCTAATGTTGGAAATGCTCAATCC 1460 Query 38298 TATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTC 38357 || || || ||| ||| || || | |||||| || ||||| || || | || || || Sbjct 1459 AATCCCGCCAGCAGTTTTGGAGATAAGAGCGCACTGCTTTAAGGTTTCGTAGATGCCATC 1400 Query 38358 TATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGG-CAATGGAGTTC 38416 || |||||||| | || | | || ||| ||||| || | |||||| | || | || | Sbjct 1399 GATGCTGTCATCTTGCATCGCCAATAAAAAGCAACTGGATAATTGAGGTCTATTG-GTGC 1341 Query 38417 CGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATG 38476 | ||||| |||| || || || ||||| ||||||| || || |||| | ||| || | Sbjct 1340 CAGCGTTGAATAGAGTGGGTGACGCATGGGTGAACCACTTCTCAGACATAAGATTGTAGG 1281 Query 38477 TTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATAT 38536 |||| || | ||| |||| |||| || || || | || || ||||||||||| | Sbjct 1280 TTTCAATAGCGCGATCGATATTTTCGCCATGGATGCCGATGGAGACTCTCATTAGCATGT 1221 Query 38537 GTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTT 38596 |||| || | ||| | |||| ||| |||| | || || || | |||| |||| Sbjct 1220 GTTGCGGGCGTTCGGCCACTTTACCATTAAGTTTCAACAGGTATGACCTCTCTAGCGTTT 1161 Query 38597 TTATTCCAAAATAACTATATGAATAATCTCTATCGTA 38633 | | || || || |||| || |||| | |||||| Sbjct 1160 TAAAGCCGAAGTAGTTATACGAGAAATCCCGATCGTA 1124 >seq3604 Length=7407 Score = 284 bits (314), Expect = 1e-71 Identities = 1197/1866 (64%), Gaps = 38/1866 (2%) Strand=Plus/Minus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 || |||||||| | || | | | ||| | || |||| | ||||||||| || || Sbjct 5407 TCCACTGTGAACTGAATGGCTTGAGCTGCTGGCTTCGTTCGAAGATAATACATCCCGGTC 5348 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || || || | |||| |||||||||||||| || ||||| || |||| |||| | Sbjct 5347 TTGAGTCCGACCTTCCACCCGTAAAAATGCATGCTAGTCAGCTTGCCGTAGTTAGGCTCC 5288 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 | || | || ||| ||||||||| || || ||| | | ||||||||||||| Sbjct 5287 GCGATGTGAATGTTCAAACTTTGACTTTGGTCGATGTACGGTGCCCGGTCGGCTGCCATT 5228 Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029 | | || || || || |||||||| || || ||| | || || |||| || Sbjct 5227 TTGATGATGTTCTTCTGCGAAATCTCCCACACGGTACGATACAATTCCTTCATATCCTCA 5168 Query 37030 GGTAAATCTAA---ATGTT--GAATAGAACCATTATGTAACACAAT-TGTATTCTTTATG 37083 || ||||| | ||||| |||| || || || | | | || || | ||||| | Sbjct 5167 GG--AATCTGAGGGATGTTCTGAATCGATCCGTTGTTTGCGATAAGCTGCAA-CTTTACG 5111 Query 37084 TCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGA 37143 |||| ||||| ||| ||| | | | || | | ||| || ||||||||| ||| Sbjct 5110 TCATCGTTCCAGATACCTCTTTCTGTCAAATCCATGAGTAGATGCTGATTTACAATCTGG 5051 Query 37144 AAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCA 37203 || || || || | || | | || || || ||||| || ||||| ||||||| ||| Sbjct 5050 AATTCGCCGGACAGCACACGACGCGTGTAAATGTTGCTGGTGTATGGCTCAATGGCTTCA 4991 Query 37204 TTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTT 37263 ||||||| | |||||||| || ||||| || ||||| || |||| || || ||| Sbjct 4990 TTATTACCCAGTATTTGAGCAGTGGATGCTGTTGGCATCGGCGCTAACAGCAGAGAATTA 4931 Query 37264 CTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGG 37323 | | ||| || | || || ||| ||| | ||||||||| ||||| || ||| Sbjct 4930 CGTACTCCGTGCTTTTTGATCTTCTCTTTCAAAGACGCCCAATCCCACAAATCAGTGGGG 4871 Query 37324 TTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTC 37383 || ||||| |||||| |||| ||||| || | ||||| | | ||| || Sbjct 4870 GTCACGCCCCACAAATCATACTGTAATTGACCTTGGCTGACAGGAGATCCCTCATAGCTC 4811 Query 37384 TCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATT 37443 ||||| || ||| || || ||||||||| | | | || || |||| || Sbjct 4810 TCATACGGACCGCTCTCTTCCGCAAGTTCGCAAGACGCTGTCAAAGCCGCGAAATAAATG 4751 Query 37444 GTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATG-CATAGCCCAA 37502 || ||||| |||| | || | | | || || ||| || || | ||| | ||| Sbjct 4750 GTCTCGAATATTTCAACGTTGAGCTTCATGGCCTCGGGGCTGTCAAACGGCATT-CGCAA 4692 Query 37503 TAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATT 37562 | ||||| | || || | || || || || ||||| || || | || || | || Sbjct 4691 CATGATAAAGGCGTCCGCGAGCCCTTGCACTCCAATACCGATTGGACGGTGCCTCATGTT 4632 Query 37563 AGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATT--- 37619 || | || || || || || || ||||| || || ||||| || ||||| Sbjct 4631 CGAATTCCTCGCTTGAGGTACAGGGTAGTAGTTGATGTCAATGATTTTGTTCAGATTCCG 4572 Query 37620 TTTAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAA--CATAAATAC-GTTATTATT 37676 | | |||| || | | | | ||| || | ||| |||| | | || || | Sbjct 4571 TGTGACTACC--TTGCACACGTCGTA-CAATTTTTTGAAATCATACTTTCCGTCGTTGGT 4515 Query 37677 AACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACT 37736 ||| | ||| | || || | ||||||||||| || || || || | | | | Sbjct 4514 TACATAACGGGGCAATGCGATCGAAGCGAGATTACATACGGCCACCTCGTCCTTGCTGGT 4455 Query 37737 AAATTGTATAATCTCTGTACAGAGATTACTCGATCTA---ATTGTTCCCAAATTGCTTTG 37793 ||| || |||||| || |||||||| ||| || || || |||| ||| | || Sbjct 4454 GTATTCTACAATCTCAGTGCAGAGATT---CGAGCTTTTGATCGTGCCCAGATTTTTCTG 4398 Query 37794 ATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTG 37853 ||| |||||||| || |||| ||||| || || || |||||||| || ||| || || Sbjct 4397 ATTTGATTTTTTGTTGCAAGCGTCTTTGTAGAGCATGTACGGCGTACCGGTTTCGATCTG 4338 Query 37854 AGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTAAtttttttCTT 37913 | |||||| || | | ||| | || ||||| ||| | || | | || Sbjct 4337 CGACTCGATGATGGCGTACCACAGTTTTTGCGCTTT---GATTGTCTTCCTCGCTCTCCC 4281 Query 37914 TG---TTTCGTA-TTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATC 37969 || |||| || |||| || | || | ||| |||| || | || ||| || | Sbjct 4280 TGCTTTTTCATACTTCTCG-TAAAGCTTATCAAATTCATCACCATAAACGTCGACCAAAC 4222 Query 37970 CTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAA 38029 | ||| || || | ||| ||||| ||| ||| |||| || |||| ||||| Sbjct 4221 CAATCGCTTCATTGGGGCAAAATAGCGACCAATCTCCATTGCTTTCAACCCGTTTCATAA 4162 Query 38030 ATAAATCAGGTACCCATAATGCAGTAAATAAA-TCTTTGGTTCTATATTCTTCGTTCCCT 38088 | ||||| |||| ||| | || ||| | || || | ||| | || || || || Sbjct 4161 ACAAATCCGGTATCCACATCGC-GTAGAAAAGGTCCCGAGCTCTTGACTCATCTTTGCCG 4103 Query 38089 ACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATC 38148 |||||| | | || ||| || || | ||| || ||||| ||||| | || | | Sbjct 4102 GTGTTCTTTTTCGCGTCTAAAAAGTCAAAGACATCCGCATGCCACGGTTCGAGGTACACC 4043 Query 38149 GACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATAT 38208 | | ||| ||||| ||||||| ||| || || | | || | | ||||| || || Sbjct 4042 GCAAATGCACCTGGCCTTTTATTACCGCCTTGGTCTACGTAACGTGCCGTGTTGTTGTAA 3983 Query 38209 ATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCC 38268 | | | |||||| | | ||| || || || ||||| | || | |||||| | || Sbjct 3982 ACACGCAGCATAGGCAAGAGACCGTTCGAGTTTCCGTTAGTGCCTGCGATATAACTGCCG 3923 Query 38269 TTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCG 38328 |||||| || || || |||||| || || || ||| ||| || || | |||| Sbjct 3922 CTAGCTCTAATGTTGGAAATGCTCAATCCAATCCCGCCAGCAGTTTTGGAGATAAGAGCG 3863 Query 38329 CATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAA 38388 || || ||||| || || | || || || || |||||||| | || | | || ||| Sbjct 3862 CACTGCTTTAAGGTTTCGTAGATGCCATCGATGCTGTCATCTTGCATCGCCAATAAAAAG 3803 Query 38389 CAACTAGACATTTGAGG-CAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTAT 38447 ||||| || | |||||| | || | || || ||||| |||| || || || ||||| | Sbjct 3802 CAACTGGATAATTGAGGTCTATTG-GTGCCAGCGTTGAATAGAGTGGGTGACGCATGGGT 3744 Query 38448 GAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTG 38507 |||||| || || |||| | ||| || ||||| || | ||| |||| |||| || Sbjct 3743 GAACCACTTCTCAGACATAAGATTGTAGGTTTCAATAGCGCGATCGATATTTTCGCCATG 3684 Query 38508 AATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTG 38567 || || | || || ||||||||||| ||||| || | ||| | |||| ||| | Sbjct 3683 GATGCCGATGGAGACTCTCATTAGCATGTGTTGCGGGCGTTCGGCCACTTTACCATTAAG 3624 Query 38568 TTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACTATATGAATAATCTCT 38627 ||| | || || || | |||| ||||| | || || || |||| || |||| | Sbjct 3623 TTTCAACAGGTATGACCTCTCTAGCGTTTTAAAGCCGAAGTAGTTATACGAGAAATCCCG 3564 Query 38628 ATCGTA 38633 |||||| Sbjct 3563 ATCGTA 3558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467821198738160