Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq8437 131 1e-25 >seq8437 Length=12918 Score = 131 bits (144), Expect = 1e-25 Identities = 188/265 (71%), Gaps = 0/265 (0%) Strand=Plus/Plus Query 20931 TCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC 20990 |||||||| || ||||||| || || ||||| | || || || ||||| || || || Sbjct 5701 TCAACGTGATTCGTGTAAACATGAGCATCACCAATAGTATGTACGAAGTCACCGGGTTTC 5760 Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 | ||| || ||||| |||| |||||| || | || ||||||||||| || |||||| Sbjct 5761 AAATTCGTAACATGAGCAATCATATACGTGAGTAAGGAATAGCTGGCGATATTGAACGGG 5820 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 | || | ||||||||| || || | || || ||||| || |||||||| || || Sbjct 5821 ATGCCTAAGCCCATGTCTGCAGATCGTTGATAAAGCTGACAAGACAGCTCTCCATCAGAA 5880 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGG 21170 || ||||| || || | | | ||||| || || | ||||| | | || ||| || Sbjct 5881 ACATAAAATTGGCATAGAGCATGACACGGGGGTAATGCCATTTGAGGGATATCCTTGGCA 5940 Query 21171 TTCCACGCGCACATAACGATGCGCC 21195 ||||| |||||||| | || |||| Sbjct 5941 TTCCATGCGCACATTATAATCCGCC 5965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427149652920720