Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq8437 143 2e-29 >seq8437 Length=12918 Score = 143 bits (158), Expect = 2e-29 Identities = 401/608 (66%), Gaps = 23/608 (4%) Strand=Plus/Plus Query 25369 TCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTC-AGC 25427 |||| |||| |||| ||| || || ||||| ||||| | || || || ||||| | Sbjct 5639 TCCTCGTTATGCTCAATGTCGGGAACGGTCTTGGCTCACGCTTCAGTTGT-TCTTCGATT 5697 Query 25428 GGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGT 25487 | ||| ||||||| | ||| || ||||| || || | ||| || || || || || ||| Sbjct 5698 GCTTCAACGTGATTCGTGTAAACATGAGCATCACCAATAGTATGTACGAAGTCACCGGGT 5757 Query 25488 TCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAG 25547 | | ||||| | ||| ||||| |||||||| | | ||||||||||| || || Sbjct 5758 TTCAAATTCGTAACATGAGCAATCATATACGTGAGTAAGGAATAGCTGGCGATATTGAAC 5817 Query 25548 GGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTC 25607 || | || || ||||||| | | || | || || |||||||| || |||||| | || Sbjct 5818 GGGATGCCTAAGCCCATGT-CTGCAGATCGTTGATAAAGCTGACAAGACAGCTCTCCATC 5876 Query 25608 GCTCACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTT 25667 || ||||| || || | | | ||||| || | || || | | || || Sbjct 5877 AGAAACATAAAATTGGCATAGAGCATGACACGGGGGTAATGCCATTTGAGGGATATCCTT 5936 Query 25668 AGGGTTCCAGGCGCACACGATGATGCACCTG-TCTTC----TGGGTTGTCCC----TGAT 25718 | ||||| ||||||| || || | |||| | ||| ||| |||| | |||| Sbjct 5937 GGCATTCCATGCGCACATTATAATCCGCCTGCTATTCGGATTGGATTGTATCGTGTTGAT 5996 Query 25719 AAGATCCGCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTC 25778 || ||| || ||||| || || || | || | ||| || || |||||| Sbjct 5997 AACATCGGC---------AAGCTGGTCAACACCTTTTCCAGTGTAATCGGCATGCATGTC 6047 Query 25779 CGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATC 25838 ||| || ||||| |||| | ||| || || || || ||||| || ||||| || || Sbjct 6048 TTGGTATTCAGCTCCAAAATGGCGCCATTGAAATCCATAAACCGGACCAAGGTCGCCCTC 6107 Query 25839 TTCCCTGTGCTCAAAGCCC-CTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGA 25897 ||| | | || ||| ||| |||| || ||| ||| | || || || || ||||| | Sbjct 6108 TTCGC-GATCTGAAAACCCAGACTTACTCAGAAATTCTTTAGAGCCGTTTGCATCCCAAA 6166 Query 25898 TCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCA 25957 | | ||| ||| || ||||| || || | ||| || ||| | | |||||||| || Sbjct 6167 TGTGTACTTTCTTATCCGAGAGTTCCTTTGCGTTAGTACTCCCCTTTATGAACCACAACA 6226 Query 25958 GCTCCGCC 25965 | ||| || Sbjct 6227 GTTCCTCC 6234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339639572545647