Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3604 205 2e-47 seq8437 172 1e-37 >seq3604 Length=7407 Score = 205 bits (226), Expect = 2e-47 Identities = 1129/1779 (63%), Gaps = 23/1779 (1%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | ||| ||| | |||| || ||||| | | |||||| | | | ||| Sbjct 3585 TTCGGCTTTAAAACGCTAGAGAGGTCATACCTGTTGAAACTTAATGGTAAAGTGGCCGAA 3644 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 |||||||| || ||| ||||| | || | || || |||||| || || | ||| | Sbjct 3645 CGCCCGCAACACATGCTAATGAGAGTCTCCATCGGCATCCATGGCGAAAATATCGATCGC 3704 Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCTC-GTGTATTCACGCACGCCACGCCAACAAT 363569 || |||||||| || || ||| | || ||| ||||| || || | || || | Sbjct 3705 GCTATTGAAACCTACAATCTTATGTCTGAGAAGTGG-TTCACCCATGCGTCACCCACTCT 3763 Query 363570 GTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGA 363629 | ||| ||||| || || || || | || ||||||| | | ||| | || Sbjct 3764 ATTCAACGCTGGCACCAATAGACCTCAATTATCCAGTTGCTTTTTATTGGCGATGCAAGA 3823 Query 363630 CGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGC 363689 || |||||| || |||| || || | ||| | || |||||||| ||||| | ||| Sbjct 3824 TGACAGCATCGATGGCATCTACGAAACCTTAAAGCAGTGCGCTCTTATCTCCAAAACTGC 3883 Query 363690 AGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGC-GGCA 363748 ||||| ||||| | || ||| || | || |||||| || ||| |||| Sbjct 3884 TGGCGGGATTGGATTGAGCATTTCCAACATTAGAGCTAGCGGCAGTTATAT-CGCAGGCA 3942 Query 363749 CAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGT 363808 | ||| ||||||| || || | || ||||| ||||| | |||| || || | | Sbjct 3943 CTAACGGAAACTCGAACGGTCTCTTGCCTATGCTGCGTGTTTACAACAACACGGCACGTT 4002 Query 363809 ACGTCGACCAGGGTGG-AGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCAT 363867 |||| ||||| || || | ||| || | || || ||||| |||| ||||| || Sbjct 4003 ACGTAGACCAAGGCGGTAATAAAAGGCCA-GGTGCATTTGCGGTGTACCTCGAACCGTGG 4061 Query 363868 CATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA-AACACGGGAAAAGAGGAATTGCG 363926 ||||| ||| | ||||| ||| | || | | ||| ||||| || ||||| || | | Sbjct 4062 CATGCGGATGTCTTTGACTTTTTAGA-CGCGAAAAAGAACACCGGCAAAGATGAGTCAAG 4120 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG-G 363985 || || || || ||||| || | ||| | | || |||||||| || || || | Sbjct 4121 AGCTCGGGACCTTTTCTACGCGATGTGGATACCGGATTTGTTTATGAAACGGGTTGAAAG 4180 Query 363986 CAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGG 364045 || ||| |||||| || |||||||| | ||| ||| | ||| || | | Sbjct 4181 CAATGGAGA-TTGGTCGCTATTTTGCCCCAATGAAGCGATTGGTTTGGTCGACGTTTATG 4239 Query 364046 GTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGG-AGGGAAAGGCTCGTAAGACA 364104 |||| || | || | || ||||| ||||||||| | ||||| || | | |||||| Sbjct 4240 GTGATGAATTTGATAAGCTTTACGAGAAGTATGAAAAAGCAGGGAGAG-CGAGGAAGACA 4298 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 || || || || || |||| |||||||| || |||||||| || || || || || Sbjct 4299 ATCAAAGCGCAAAAACTGTGGTACGCCATCATCGAGTCGCAGATCGAAACCGGTACGCCG 4358 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 || ||| | |||||||| | |||||| || || || ||| | | || || || || Sbjct 4359 TACATGCTCTACAAAGACGCTTGCAACAAAAAATCAAATCAGAAAAATCTGGGCACGAT- 4417 Query 364225 CAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283 || || | || || || || |||||| | ||||||||| |||||| ||||| Sbjct 4418 CAAAAGCTCGAATCTCTGCACTGAGATTGTAGAATACACCAGCAAGGACGAGGTGGCCGT 4477 Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTT-TGTA---AAAGATGGTACTTTTGACC 364339 |||||| || || |||||||| || | |||| |||| || || || | | ||| Sbjct 4478 ATGTAATCTCGCTTCGATCGC-ATTGCCCCGTTATGTAACCAACGACGGAAAGTATGATT 4536 Query 364340 ACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACA 364399 | | | | || ||||| | | | || | ||||| |||| | || |||| Sbjct 4537 TCAAAAAATTGTACGACGTGTGCAAGGTAGTCACACGGAATCTGAACAAAATCATTGACA 4596 Query 364400 AGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTC 364459 || || || || | ||| |||| | ||| || ||| | || || || || ||| Sbjct 4597 TCAACTACTACCCTGTACCTCAAGCGAGGAATTCGAACATGAGGCACCGTCCAATCGGTA 4656 Query 364460 TTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTG 364519 |||| || || || ||||| |||| ||||| ||| | ||| | ||||| || | Sbjct 4657 TTGGAGTGCAAGGGCTCGCGGACGCCTTTATCATGTTGCGAATGCCGTTTGACAGCCCCG 4716 Query 364520 ACGCTCGTG-TTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCT 364578 | || | || || || || || || || || || ||||| || || |||| || Sbjct 4717 AGGC-CATGAAGCTCAACGTTGAAATATTCGAGACCATTTATTTCGCGGCTTTGACAGCG 4775 Query 364579 TCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCG 364638 || || || | || || | || ||| | |||||||| || ||| | Sbjct 4776 TCTTGCGAACTTGCGGAAGAGAGCGGTCCGTATGAGAGCTATGAGGGATCTCCTGTCAGC 4835 Query 364639 CAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGAT 364698 || || |||| |||| |||| | ||| || || || ||| ||| | |||| Sbjct 4836 CAAGGTCAATTACAGTATGATTTGTGGGGCGTGACCCCCACTGATTTGTGGGATTGGGCG 4895 Query 364699 ACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATG 364758 | | || | || ||||| || || || || || | |||||| ||| Sbjct 4896 TCTTTGAAAGAGAAGATCAAAAAGCACGGAGTACGTAATTCTCTGCTGTTAGCGCCGATG 4955 Query 364759 CCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGC 364818 || || || || ||||| || || || || || || || | | || || | || ||| Sbjct 4956 CCAACAGCATCCACTGCTCAAATACTGGGTAATAATGAAGCCATTGAGCCATACACCAGC 5015 Query 364819 AATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTC 364878 || |||| | || || || || ||||| ||||| | | | || ||| || | ||| || Sbjct 5016 AACATTTACACGCGTCGTGTGCTGTCCGGCGAATTCCAGATTGTAAATCAGCATCTACTC 5075 Query 364879 AAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCT 364938 | |||| | | || | || | ||| || | | ||| | | ||||| Sbjct 5076 ATGGATTTGACAGAAAGAGGTATCTGGAACGATGACGTAAAGTTGCAGCTTATCGCAAAC 5135 Query 364939 AATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACC 364998 || || || | |||||||| || |||| || ||| ||||| | || ||| Sbjct 5136 AACGGATCGATTCAGAACATCCCTCAGATTCCTGAGGATATGAAGGAATTGTATCGTACC 5195 Query 364999 GTATGGGAAATTTC-CATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTAT 365057 || ||||| ||||| || |||| |||| | ||||| ||||| || | | | || Sbjct 5196 GTGTGGGAGATTTCGCAGAAGAAC-ATCATCAAAATGGCAGCCGACCGGGCACCGTACAT 5254 Query 365058 CTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATC 365117 | || || || || ||| | ||| | |||| | || || |||||| || Sbjct 5255 CGACCAAAGTCAAAGTTTGAACATTCACATCGCGGAGCCTAACTACGGCAAGCTGACTAG 5314 Query 365118 CATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 ||||||||| ||||||||||| ||| || ||||| || Sbjct 5315 CATGCATTTTTACGGGTGGAAGGTCGGACTCAAGACCGG 5353 >seq8437 Length=12918 Score = 172 bits (190), Expect = 1e-37 Identities = 407/606 (67%), Gaps = 8/606 (1%) Strand=Plus/Minus Query 111315 TTTCCACTTCTCACAACAAAGCGAACATATTGGA-AGG-GAATTGTCGAAGAACTTCTGT 111372 ||||| | ||||| |||||||| | ||||| ||| | |||| || ||||| ||| Sbjct 6278 TTTCCTTTGCTCACGACAAAGCGCGTGTTTTGGAGAGGCGTATTG--GAGGAACTGTTGT 6221 Query 111373 GGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGG 111432 |||| || || ||||| || ||||| ||||| | | || || ||| | ||||||| Sbjct 6220 GGTTCATAAAGGGGAGTACTAACGCAAAGGAACTCTCGGATAAGAAAGTACACATTTGGG 6161 Query 111433 ATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-GACAACGAAGAAGGT 111491 ||| ||| || || || ||||| || | ||| | || || || |||||| || Sbjct 6160 ATGCAAACGGCTCTAAAGAATTTCT-GAGTAAGTCTGGGTTTTCAGATCGCGAAGAGGGC 6102 Query 111492 GATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATG 111551 || || || || ||||| ||||||||||||||||| ||||| || || ||| || |||| Sbjct 6101 GACCTTGGTCCGGTTTATGGATTTCAATGGCGCCATTTTGGAGCTGAATACCAAGACATG 6042 Query 111552 CACGACTCATATGATTCACAGGGAACTGATCAA-TTACAGAATGTCATTGATCAAATTAA 111610 || | | || | | | || ||| || || | || ||| || | || | Sbjct 6041 CATGCCGATTACACTGGAAAAGGTGTTGACCAGCTTGCCGA-TGTTATCAACACGATACA 5983 Query 111611 GAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGGAAAA 111670 ||| || | | | || ||||| ||| | |||||||| | || | | | Sbjct 5982 ATCCAATCCGAATAGCAGGCGGATTATAATGTGCGCATGGAATGCCAAGGATATCCCTCA 5923 Query 111671 AATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTC 111730 ||||||| | || || |||||| | | ||||| |||||||| || || ||| || Sbjct 5922 AATGGCATTACCCCCGTGTCATGCTCTATGCCAATTTTATGTTTCTGATGGAGAGCTGTC 5863 Query 111731 ATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAG 111790 || || | ||||| |||||||| || || || | || | ||||| ||||| || || Sbjct 5862 TTGTCAGCTTTATCAACGATCTGCAGACATGGGCTTAGGCATCCCGTTCAATATCGCCAG 5803 Query 111791 TTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCAT 111850 || | |||| || | | || |||||| |||| ||| | ||||| ||||| ||| | Sbjct 5802 CTATTCCTTACTCACGTATATGATTGCTCATGTTACGAATTTGAAACCCGGTGACTTCGT 5743 Query 111851 TCACGTTATCGGAGATGCGCATGTTTACACAAACCACATTGATGCACTTAAAACACAGTT 111910 || ||| || ||||| ||||||||||| || ||| |||| ||| | || ||| | Sbjct 5742 ACATACTATTGGTGATGCTCATGTTTACACGAATCACGTTGAAGCAATCGAAGAACAACT 5683 Query 111911 GAAGCG 111916 |||||| Sbjct 5682 GAAGCG 5677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1301347372648698