Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq114234 158 2e-33 seq1613 149 1e-30 seq114236 141 2e-28 seq3604 100 5e-16 seq116056 91.5 3e-13 >seq114234 Length=910 Score = 158 bits (174), Expect = 2e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | || ||||||||||||||||| || ||| ||| || | || ||||| Sbjct 280 ACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTGAGAGTGCGGCCGTCTTCC 221 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| |||||||| ||||| | ||||| ||||| ||||||||||| || |||||| Sbjct 220 AATTGCTTGCCGGCGAAGATGAGACGCTGTTGATCGGGAGGAATGCCTTCTTTATCTTGA 161 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| |||||| || |||||||| | | || || ||||| || |||||||| Sbjct 160 ATCTTCTGCTTGACATTATCAATGGTGTCAGAAGCCTCGACCTCCAAAGTAATGGTTTTG 101 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || | || |||||||| || |||||| Sbjct 100 CCTGTCAAAGTTTTGACGAAGATTTGCATT 71 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | || ||||||||||||||||| || ||| ||| || | |||||||| Sbjct 736 ACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCTTCC 677 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| ||||| || || || | ||||| ||||| ||||||||||| || |||||| Sbjct 676 AATTGCTTGCCGGCAAAGATCAGACGCTGTTGATCGGGAGGAATGCCTTCTTTATCTTGA 617 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| |||||| || |||||||| | | || || ||||| || |||||||| Sbjct 616 ATCTTCTGCTTGACATTATCAATGGTGTCAGAAGCCTCGACCTCCAAAGTAATGGTTTTG 557 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || | || || ||||| || |||||| Sbjct 556 CCTGTCAAAGTTTTCACGAAGATTTGCATT 527 Score = 118 bits (130), Expect = 2e-21 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | || || || || |||||||| || ||| ||| || | || || || Sbjct 508 ACCAAGTGCAAAGTNGANTCNTTNTGGATGTTGTAGTCGCTGAGNGTNCGGCCGTCNTCC 449 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| || || || ||||| | || || ||||| ||||||||||| ||||| || Sbjct 448 AATTGCTTGCCNGCNAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCTTTGTCCTGG 389 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 | || ||| || ||||| ||||||| | || ||||| | ||| || ||||| Sbjct 388 NTTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTA 329 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || | || |||||||| || |||||| Sbjct 328 CCGGTCAAAGTNTTGACGAAGATTTGCATT 299 Score = 96.9 bits (106), Expect = 6e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 || || || ||||| || ||||| ||||| | || || ||||| |||||||| |||||| Sbjct 910 TCCTCCAATTGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGGAATGCCCTCCTTG 851 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 || || || || ||| || ||||| ||||||| | || ||||| | ||| || Sbjct 850 TCCTGGATTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATA 791 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||| || || | ||||||||||| || |||||| Sbjct 790 GTTTTACCGGTCAAAGTCTTGACGAAGATTTGCATT 755 >seq1613 Length=19885 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 ||||| |||||||| | || || || ||||||||||| || ||| ||| || | ||| Sbjct 369 CGCAAGACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGGCCA 310 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 ||||| || ||||| || ||||| ||||| | ||||| ||||| || || ||||||||| Sbjct 309 TCTTCCAATTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGGATACCTTCCTTG 250 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 || || || || |||||| ||||||||||| | | || || |||| |||||| Sbjct 249 TCCTGGATTTTCTGCTTGACATTATCGATGGTGTCAGAAGCCTCAACCTCCAGAGTGATG 190 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || || |||||||| || || ||||| Sbjct 189 GTTTTACCGGTAAGAGTCTTGACAAAGATTTGCAT 155 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||| | || || || || |||||||| ||||| || ||| Sbjct 837 CCGCCTCGGAGACGAAGTACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGCTA 778 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| |||||||| || || | || || || || ||| Sbjct 777 AGCGTACGGCCATCTTCCAGCTGCTTGCCGGCGAAGATTAGACGCTGCTGATCTGGAGGA 718 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| ||||| ||||||| ||||||||||| | | ||| || Sbjct 717 ATGCCTTCCTTGTCTTGGATCTTCTGCTTGACGTTATCGATGGTGTCCGAGGCTTCGACC 658 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || ||||| |||||||| || ||||| || ||||| Sbjct 657 TCAAGCGTGATCGTCTTTCCTGTGAGGGTTTTTACGAAGATTTGCAT 611 Score = 131 bits (144), Expect = 3e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | || || ||||||||||| || || || ||| || | ||||| || Sbjct 591 ACCAAGTGCAAAGTAGATTCTTTTTGGATATTGTAGTCACTGAGGGTACGGCCATCCTCC 532 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| || ||||| || || | ||| || || || ||||| ||||| || || ||| Sbjct 531 AATTGCTTACCAGCGAAGATAAGACGTTGCTGATCAGGAGGAATCCCTTCTTTATCCTGA 472 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || |||||| ||||||||||| | | || ||||| | || ||||||||| Sbjct 471 ATTTTCTGCTTGACATTATCGATGGTGTCGGAAGCCTCGACTTCAAGAGTAATGGTTTTT 412 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || ||||| ||||| ||||||||| Sbjct 411 CCGGTCAGAGTCTTCACGAAAATCTGCATT 382 Score = 95.1 bits (104), Expect = 2e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | ||||| || || |||||||| || ||| ||| || | ||||| || Sbjct 135 ACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTCC 76 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| || ||||| ||||| | || || ||||| ||||||||||||||||| || Sbjct 75 AATTGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGG 16 Query 68373 ATCTT 68377 || || Sbjct 15 ATTTT 11 >seq114236 Length=889 Score = 141 bits (156), Expect = 2e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | || ||||||||||||||||| || ||| || || | || ||||| Sbjct 382 ACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTNAGAGTGCGGCCGTCTTCC 441 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| ||||| || ||||| | || || ||||| ||||||||||||||||| || Sbjct 442 AATTGCTTGCCGGCAAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGG 501 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || ||| || ||||| ||||||| | || ||||| | ||| || ||||| Sbjct 502 ATTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTG 561 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || | ||||||||||| || |||||| Sbjct 562 CCTGTCAAAGTCTTGACGAAGATTTGCATT 591 Score = 138 bits (152), Expect = 2e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | || || || || |||||||| || ||| || || | || ||||| Sbjct 610 ACCAAGTGCAAAGTCGATTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGGCCGTCTTCC 669 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 |||||||| |||||||| || || | |||||| || || ||||||||||| || |||||| Sbjct 670 AACTGCTTACCGGCGAAGATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTATCTTGA 729 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | || || ||||||||||| | | || || ||||| ||||| ||||| Sbjct 730 ATCTTCGATTTTACATTTTCGATGGTGTCAGAAGCCTCGACCTCCAAAGTGATAGTTTTA 789 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | |||||||| || || ||||| Sbjct 790 CCGGTCAAAGTCTTGACAAAGATTTGCAT 818 Score = 136 bits (150), Expect = 7e-27 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | || || || || |||||||| || ||| || || | || ||||| Sbjct 154 ACCAAGTGCAAAGTCGATTCCTTCTGGATGTTGTAGTCGCTNAGGGTGCGGCCGTCTTCC 213 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 |||||||| |||||||| || || | |||||| || || ||||||||||| || |||||| Sbjct 214 AACTGCTTACCGGCGAAGATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTATCTTGA 273 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | || || ||||||||||| | | || || |||| ||||| ||||| Sbjct 274 ATCTTCGATTTTACATTTTCGATGGTGTCAGAAGCCTCGACCTCCANAGTGATAGTTTTA 333 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | |||||||| || || ||||| Sbjct 334 CCGGTCAAAGTCTTGACNAAGATTTGCAT 362 Score = 86.0 bits (94), Expect = 1e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 68328 AATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACG 68387 || ||||| | || || ||||| ||||||||||||||||| || || || ||| || Sbjct 1 AAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTCACA 60 Query 68388 GCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTG 68447 ||||| ||||||| | || ||||| | ||| || ||||| || || | |||||| Sbjct 61 TTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTACCGGTCAAAGTCTTG 120 Query 68448 ACGAATATCTGCATT 68462 ||||| || |||||| Sbjct 121 ACGAAGATTTGCATT 135 >seq3604 Length=7407 Score = 100 bits (110), Expect = 5e-16 Identities = 175/255 (69%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 31356 GGAGACCCCTCAAAGGTAGGATGGGGACCGTGCTCTTCCGCGAGTTCGCAAGAGGCCTCC 31415 ||||| |||||| || | || |||||| ||||||||| ||||||||||| || | Sbjct 4828 GGAGATCCCTCATAGCTCTCATACGGACCGCTCTCTTCCGCAAGTTCGCAAGACGCTGTC 4769 Query 31416 ACCGCTGCAAAGTAAATATTCTCAAAGATTTCCCGGTTGAGGTTCTTGGCCGCGTCAGAG 31475 | || || || ||||| |||| || ||||| |||||| ||| ||||| || | Sbjct 4768 AAAGCCGCGAAATAAATGGTCTCGAATATTTCAACGTTGAGCTTCATGGCCTCGGGGCTG 4709 Query 31476 TCAAAAGGCATGCGCAGCTTGAAGAACACGTCCTGAAGACCCTGGACACCCACTCCAATT 31535 ||||| ||||| |||| | ||| || ||||| || || || || || | || ||| Sbjct 4708 TCAAACGGCATTCGCAACATGATAAAGGCGTCCGCGAGCCCTTGCACTCCAATACCGATT 4649 Query 31536 GGGCGCCGGCGCATGTTACTAGTCTTCGCCTCGGGAATTGCGTAGGACATGACGTCAATG 31595 || || | | |||||| | || |||| | || | | |||| | ||| ||||||| Sbjct 4648 GGACGGTGCCTCATGTTCGAATTCCTCGCTTGAGGTACAGGGTAGTAGTTGATGTCAATG 4589 Query 31596 CTCTTGTCGAGGTTC 31610 | |||| || ||| Sbjct 4588 ATTTTGTTCAGATTC 4574 >seq116056 Length=8111 Score = 91.5 bits (100), Expect = 3e-13 Identities = 173/255 (68%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 31356 GGAGACCCCTCAAAGGTAGGATGGGGACCGTGCTCTTCCGCGAGTTCGCAAGAGGCCTCC 31415 ||||| |||||| || | || |||||| ||||||||| ||||||||||| || | Sbjct 2394 GGAGATCCCTCATAGCTCTCATACGGACCGCTCTCTTCCGCAAGTTCGCAAGACGCTGTC 2335 Query 31416 ACCGCTGCAAAGTAAATATTCTCAAAGATTTCCCGGTTGAGGTTCTTGGCCGCGTCAGAG 31475 | || || || ||||| |||| || ||||| |||||| ||| ||||| || | Sbjct 2334 AAAGCCGCGAAATAAATGGTCTCGAATATTTCAACGTTGAGCTTCATGGCCTCGGGGCTG 2275 Query 31476 TCAAAAGGCATGCGCAGCTTGAAGAACACGTCCTGAAGACCCTGGACACCCACTCCAATT 31535 || || ||||| |||| | ||| || ||||| || || || || || | || || Sbjct 2274 TCGAATGGCATTCGCAACATGATAAAGGCGTCCGCCAGTCCTTGCACTCCAATACCGATC 2215 Query 31536 GGGCGCCGGCGCATGTTACTAGTCTTCGCCTCGGGAATTGCGTAGGACATGACGTCAATG 31595 || || | | |||||| | || |||| | || | | |||| | ||| ||||||| Sbjct 2214 GGACGGTGCCTCATGTTCGAATTCCTCGCTTGAGGCACGGGGTAGTAGTTGATGTCAATG 2155 Query 31596 CTCTTGTCGAGGTTC 31610 | |||| || ||| Sbjct 2154 ATTTTGTTCAGATTC 2140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 920238365081080