Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq114234 143 2e-29 seq1613 141 8e-29 seq114236 123 2e-23 seq41383 84.2 2e-11 seq2597 84.2 2e-11 >seq114234 Length=910 Score = 143 bits (158), Expect = 2e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| |||||||| |||||||| ||||| | ||| || ||||| | ||| || || Sbjct 268 GTAGACTCTTTTTGGATGTTGTAGTCGCTGAGAGTGCGGCCGTCTTCCAATTGCTTGCCG 209 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||||||||||||||| || ||||||||||||||||| || |||||| || || Sbjct 208 GCGAAGATGAGACGCTGTTGATCGGGAGGAATGCCTTCTTTATCTTGAATCTTCTGCTTG 149 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | | ||||| |||| || | |||||||| |||| |||| Sbjct 148 ACATTATCAATGGTGTCAGAAGCCTCGACCTCCAAAGTAATGGTTTTGCCTGTCAAAGTT 89 Query 114366 TTTACAAAAATCTGCAT 114382 || || || || ||||| Sbjct 88 TTGACGAAGATTTGCAT 72 Score = 141 bits (156), Expect = 8e-29 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 ||||| | || || || | ||||| |||||||| |||||||| ||||| | ||| || Sbjct 745 AGTCTGAGGACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTGAGAGTGCGG 686 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 |||||| | ||| || || || |||| ||||||||||| || ||||||||||||||| Sbjct 685 CCATCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGTTGATCGGGAGGAATGCCTTCT 626 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 || || |||||| || || | | |||| |||||| | | ||||| |||| || Sbjct 625 TTATCTTGAATCTTCTGCTTGACATTATCAATGGTGTCAGAAGCCTCGACCTCCAAAGTA 566 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | |||||||| |||| |||||| || || || ||||| Sbjct 565 ATGGTTTTGCCTGTCAAAGTTTTCACGAAGATTTGCAT 528 Score = 105 bits (116), Expect = 6e-18 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 ||||||| || || || | || || || || || |||||||| ||||| | || || Sbjct 517 AGTCTCAGGACCAAGTGCAAAGTNGANTCNTTNTGGATGTTGTAGTCGCTGAGNGTNCGG 458 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 || || | ||| || || || ||||||||||||| || || ||||||||||||||| Sbjct 457 CCGTCNTCCAATTGCTTGCCNGCNAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCT 398 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 ||||| | || || || | | || | ||||| | | ||||| || | ||| Sbjct 397 TTGTCCTGGNTTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTA 338 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| ||||||| ||| || || || || ||||| Sbjct 337 ATAGTTTTACCGGTCAAAGTNTTGACGAAGATTTGCAT 300 Score = 82.4 bits (90), Expect = 6e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 || || | ||| || |||||| ||||||||||||| || || ||||||||||| || ||| Sbjct 910 TCCTCCAATTGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGGAATGCCCTCCTTG 851 Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347 || || || || || | | || | ||||| | | ||||| || | ||| | Sbjct 850 TCCTGGATTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATA 791 Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| ||||||| ||| || || || || ||||| Sbjct 790 GTTTTACCGGTCAAAGTCTTGACGAAGATTTGCAT 756 >seq1613 Length=19885 Score = 141 bits (156), Expect = 8e-29 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||||||||||||||||||||| ||||| | ||||| |||||| || || || || Sbjct 807 GTAGATTCTTTTTGAATGTTGTAGTCGCTAAGCGTACGGCCATCTTCCAGCTGCTTGCCG 748 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| |||||||| || || |||||||||||||| ||||| ||||| || || Sbjct 747 GCGAAGATTAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATCTTCTGCTTG 688 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| | || |||||| || | || | ||| || || || || ||| Sbjct 687 ACGTTATCGATGGTGTCCGAGGCTTCGACCTCAAGCGTGATCGTCTTTCCTGTGAGGGTT 628 Query 114366 TTTACAAAAATCTGCATG 114383 ||||| || || |||||| Sbjct 627 TTTACGAAGATTTGCATG 610 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 ||||||| || || || | |||||||||||||| || ||||| || || | ||||| Sbjct 600 AGTCTCAGGACCAAGTGCAAAGTAGATTCTTTTTGGATATTGTAGTCACTGAGGGTACGG 541 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 ||| || | ||| ||||||||| |||| ||||| || || || |||||||| |||||| Sbjct 540 CCATCCTCCAATTGCTTACCAGCGAAGATAAGACGTTGCTGATCAGGAGGAATCCCTTCT 481 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 || || ||| || || || | | || | |||||||| | ||||| || | || Sbjct 480 TTATCCTGAATTTTCTGCTTGACATTATCGATGGTGTCGGAAGCCTCGACTTCAAGAGTA 421 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| ||||||||||| || || ||||||||||| Sbjct 420 ATGGTTTTTCCGGTCAGAGTCTTCACGAAAATCTGCAT 383 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 || ||| || || || | || ||||| ||||| |||||||| ||||| | || || Sbjct 370 TCGCAAGACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGGCC 311 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 |||||| | ||| || |||||| |||||||||||||||| || ||||| || ||||| || Sbjct 310 ATCTTCCAATTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGGATACCTTCCTT 251 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 ||| || || || || | | || | |||||| | | || || |||| || | Sbjct 250 GTCCTGGATTTTCTGCTTGACATTATCGATGGTGTCAGAAGCCTCAACCTCCAGAGTGAT 191 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| ||||| ||||| || ||||| || ||||| Sbjct 190 GGTTTTACCGGTAAGAGTCTTGACAAAGATTTGCAT 155 Score = 89.7 bits (98), Expect = 4e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| || || | || ||||| || || |||||||| ||||| | || || ||| || Sbjct 136 AACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTC 77 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289 | ||| || |||||| ||||||||||||| || || |||||||||||||| ||||| Sbjct 76 CAATTGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTC 20 >seq114236 Length=889 Score = 123 bits (136), Expect = 2e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | ||||| ||| || || | ||||| |||||||| |||||||| ||| Sbjct 361 ATACCTCCTCTCAATCTCAGAACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCG 420 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | ||| || ||||| | ||| || || || ||||||||||||| || || ||| Sbjct 421 CTNAGAGTGCGGCCGTCTTCCAATTGCTTGCCGGCAAAGATGAGACGCTGCTGATCGGGA 480 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| || || || || | | || | ||||| | | ||| Sbjct 481 GGAATGCCTTCCTTGTCCTGGATTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCG 540 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | |||||||| |||| ||| || || || || ||||| Sbjct 541 ACTTCGAGGGTAATAGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 590 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 ||||| | || || || | || ||||| || || |||||||| ||||| | || || Sbjct 601 AGTCTGAGGACCAAGTGCAAAGTCGATTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGG 660 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 ||||| | || ||||| ||| |||| ||||| ||||| || ||||||||||||||| Sbjct 661 CCGTCTTCCAACTGCTTACCGGCGAAGATAAGACGTTGTTGATCTGGAGGAATGCCTTCT 720 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 || || |||||| ||||| | ||| | |||||| | | ||||| |||| || Sbjct 721 TTATCTTGAATCTTCGATTTTACATTTTCGATGGTGTCAGAAGCCTCGACCTCCAAAGTG 780 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| ||||||| ||| || ||||| || ||||| Sbjct 781 ATAGTTTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 818 Score = 122 bits (134), Expect = 7e-23 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 ||||| | || || || | || ||||| || || |||||||| ||||| | || || Sbjct 145 AGTCTGAGGACCAAGTGCAAAGTCGATTCCTTCTGGATGTTGTAGTCGCTNAGGGTGCGG 204 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 ||||| | || ||||| ||| |||| ||||| ||||| || ||||||||||||||| Sbjct 205 CCGTCTTCCAACTGCTTACCGGCGAAGATAAGACGTTGTTGATCTGGAGGAATGCCTTCT 264 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 || || |||||| ||||| | ||| | |||||| | | ||||| |||| || Sbjct 265 TTATCTTGAATCTTCGATTTTACATTTTCGATGGTGTCAGAAGCCTCGACCTCCANAGTG 324 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| ||||||| ||| || || || || ||||| Sbjct 325 ATAGTTTTACCGGTCAAAGTCTTGACNAAGATTTGCAT 362 >seq41383 Length=7190 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || |||||||||||||| || |||| || | |||||| | ||| || ||| Sbjct 755 GTAGACTCCTTTTGAATGTTGTAGTCACTCAAGGTTCTGCCATCTTCCAATTGCTTTCCA 814 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCT 114281 ||| ||||||||||||| || || |||||||| ||| Sbjct 815 GCGAAGATGAGACGCTGCTGATCGGGAGGAATTCCT 850 >seq2597 Length=9084 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || |||||||||||||| || |||| || | |||||| | ||| || ||| Sbjct 3357 GTAGACTCCTTTTGAATGTTGTAGTCACTCAAGGTTCTGCCATCTTCCAATTGCTTTCCA 3416 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCT 114281 ||| ||||||||||||| || || |||||||| ||| Sbjct 3417 GCGAAGATGAGACGCTGCTGATCGGGAGGAATTCCT 3452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419519241706068