Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq116056 176 5e-39 >seq116056 Length=8111 Score = 176 bits (194), Expect = 5e-39 Identities = 1137/1791 (63%), Gaps = 67/1791 (4%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||| |||| | ||| | ||| | ||| || || ||||||||||||||||| | Sbjct 2966 TGAACTGGATGGCTTGAGCCGCCGGCTTCGTTCGAAGATAATACATCCCCGTCTTGAGTC 2907 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCC-ATG 113683 | |||||| | || | |||||| || ||||||| | ||| | || | ||| Sbjct 2906 CGACCTTCCACCCGTAAAAATGCATGCTGGTCAACTTGCCGTA-GTTAGGCTCGGCGATG 2848 Query 113684 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743 | ||||| |||||| ||| |||||| | || | || || || ||||| | || Sbjct 2847 TGAATGTTCAAACTTTGACTTTGGTCGATGTACGGTGCCCGGTCGGCAGCCATTTTGATG 2788 Query 113744 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 113803 | | |||| | || |||||||| || | || | ||||| ||||| || || || Sbjct 2787 ATGTTCTTCTGCGAAATCTCCCACACGGTACGATACAATTTCTTCATATCCTCAGGAATC 2728 Query 113804 TCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCC---TTCATATCCTTT 113860 | ||| ||||| || || ||| || | ||||| | | || | ||| | Sbjct 2727 TGAGGGATGTTTTGAATCGA---ACCGTTGTTAGCGATGAGCTGCAACTTTACATCATCG 2671 Query 113861 GACCAGAGACCAATCTTTTTG--AGATCCTCCACGAGATGCTTATTGACAACAACAAACT 113918 ||||| ||| ||||| || | |||| | | | ||| ||| |||| || | Sbjct 2670 TTCCAGATACC--TCTTTCTGTCAAATCCATGAGTAAACGCTGATTTACAATCTGGAATT 2613 Query 113919 CACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGT 113978 | || | || |||| | || || ||| | ||||||||||||| | ||||| | Sbjct 2612 CGCCGGACAGCACACGTCGCGTGTAAATGTTGCTAGTGTATGGCTCAATGGCTTCATTAT 2553 Query 113979 TACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGA 114038 |||||| ||||| || ||||| ||||| ||||| || || | || || || || | Sbjct 2552 TACCCAGTATTTGAGCAGTGGATGCTGTTGGCATCGGCGCTAACAGCAGAGAATTGCGTA 2493 Query 114039 GACC---CTTTTCCCTAATG-CGTTCCTTGAGGGCG--TCCCAGTCGT-AGTTGAGCTTT 114091 || ||||| | | | ||| || | | ||||| | ||| | | Sbjct 2492 CTCCGTGCTTTTTGATCTTCTCTTTCAAAGACGCCCAATCCCACAAATCAGTGGGG---- 2437 Query 114092 GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAAT 114151 ||| | ||| |||| |||| |||| | ||||||| | || ||||||||| | Sbjct 2436 GTCACGCCC---CACAAATCATACTGTAATTGACCTTGGCTGATAGGAGATCCCTCATAG 2380 Query 114152 GTCTCGTATGGGCC-CTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATA 114210 |||| || || || ||| | ||||| | |||| | ||| | || ||| ||| Sbjct 2379 CTCTCATACGGACCGCTCT-CTTCCGCAAGTTCGCAAGACGCTGTCAAAGCCGCGAAATA 2321 Query 114211 CATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG 114270 || ||||| || || | | || | | |||||||| | || || | | ||| Sbjct 2320 AATGGTCTCGAATATTTCAACGTTGAGCTTCATGGCCTCGGGGCTGTCGAATGGCATTCG 2261 Query 114271 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 114330 ||| ||||| | ||||| || ||||| || || | || || || || || ||||| Sbjct 2260 CAACATGATAAAGGCGTCCGCCAGTCCTTGCACTCCAATACCGATCGGACGGTGCCTCAT 2201 Query 114331 ATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 114390 || || || | || |||||| || | || | || || | | || ||||| Sbjct 2200 GTTCGAATTCCTCGCTTGAGGCACGGGGTAGTAGTTGATGTCAATGATTTTGTTCAGATT 2141 Query 114391 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 114450 ||||| ||||| | || | | |||| | ||||| | | | | || | Sbjct 2140 CCGTGTGACGACCTTGCACACGTCGTACAATTTTTTGAAATCATACTTTCCA---TCGTT 2084 Query 114451 ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 114510 | || || || | ||||| || || ||||||||||| | ||| ||||| Sbjct 2083 GGTTACGTATCGGGGCAATGCGATCGAAGCGAGATTACACACGGCCACCTCGTCCTTGCT 2024 Query 114511 AGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 114570 ||||| |||| ||| || || || | |||||| || || || ||||||| | ||||| Sbjct 2023 GGTGTATTCTACAATCTCAGTGCAGAGATTTGAGCTTTTGATCGTGCCCAGATCTTTTTG 1964 Query 114571 ATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 114630 |||||| ||| |||| || || || ||||| |||||||| ||||| || || || | || Sbjct 1963 ATTTGATTTTTTGTTGCAAGCGTCTTTGTAGAGCATGTACGGCGTACCGGTTTCGATCTG 1904 Query 114631 GGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGT--TGGCTCGCCC 114687 |||| || || || | ||| | | ||| | | | || | | | |||| ||| Sbjct 1903 CGACTCGATGATGGCGTACCATAGTTTTTGCGCTTTG---ATTGTCTTCCTCGCTCTCCC 1847 Query 114688 CTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCC 114747 | | || ||||| |||||| |||||||| ||||| | || | || Sbjct 1846 TGCTTTTTCATACTTCTCGTAGAGCTTATCAAACTCATCACCATATACGTCGACCAAACC 1787 Query 114748 TGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAA 114807 | || | || ||||| || || ||||| | ||| ||||| || ||||| || Sbjct 1786 TATCGCTTCATTGGGGCAAAATAGCGACCAATCCCCATTGCTTTCAACCCGTTTCATAAA 1727 Query 114808 GAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTC-ATCCCCCT 114866 | || || ||||| | || |||| || ||||| | | ||| || | ||| | Sbjct 1726 CAAATCCGGTATCCACATCGCGTAGAAAAGGTCCCGTGCCCTTGATTCATCTTTGCCCGT 1667 Query 114867 GAT-TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 114925 | | | ||| || |||||||| | || |||||| |||||||| || ||||||||| Sbjct 1666 GTTCTTTTTCGC--GTCTAAAAAGTCAAAGACATCCGCATGCCACGGCTCGAGGTACACC 1609 Query 114926 GCGATTG-ACC---CCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAA 114981 |||| || ||| |||| | ||| | |||| ||| || | |||||| |||| | Sbjct 1608 GCGAATGCACCTGGCCTT-TTATTACCGCCTTGGTCTACGTAACGTGCTGTGTTATTATA 1550 Query 114982 TACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGAC 115039 || || ||||| || | || ||| | || | || || || || ||| ||| | | Sbjct 1549 AACACGCAGCATGGGCAAGAGACCGTTGGAGTTTCCGTTGGTGCCTGCGATATAACTGCC 1490 Query 115040 TTATTGGCTCTGACATCATGG--ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTT 115097 | ||||| || ||| ||| || ||||| || || || || ||||| Sbjct 1489 --GCTAGCTCT--AATGTTGGAAATGCTCAATCCAATCCCGCCAGCAGTTTTGGAGATAA 1434 Query 115098 GCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAA 115157 | ||||||| | | | | ||||||| || ||||| |||| | | | || | | Sbjct 1433 GAGCGCACTGCTTTAAGGTTTCGTAGATGCCATCGATGCTGTCATCTTGCATCGCCAATA 1374 Query 115158 GGAAGCAGCTCGACATTTGTGGCC--TTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGC 115215 ||||| || || | ||| || | |||||| ||||||||||| || || |||| ||| Sbjct 1373 AAAAGCAACTGGATAATTGAGGTCTATTGGTG--CCAGCGTTGAATAGAGTGGGTGACGC 1316 Query 115216 GTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGA---ATGT 115271 ||| ||||| || | | ||||| || |||||| | ||| | ||| || || | Sbjct 1315 ATGGGTGAAC-CACTTCTCAGACATAAGATTGTAGGT-TTCAATA--GCGCGATCGATAT 1260 Query 115272 CTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTG-GGGTGTT 115321 ||| || || || ||||| ||||| | ||| | ||||| ||| ||| ||| Sbjct 1259 TTTCGCCATGGATGCCGATGGAGACTCTCATTAGCATGTGTTGCGGGCGTT 1209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596456531698120