Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq114234 149 6e-31 seq114236 140 3e-28 seq1613 134 1e-26 seq3604 87.8 2e-12 >seq114234 Length=910 Score = 149 bits (164), Expect = 6e-31 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || | || ||| || || | || | || || |||||||| |||||||| || | Sbjct 298 CCACCTCTCANTCTNAGNACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTG 239 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| ||||||| | ||||||||||| | ||||| ||||| || ||||||||| Sbjct 238 AGAGTGCGGCCGTCTTCCAATTGCTTGCCGGCGAAGATGAGACGCTGTTGATCGGGAGGA 179 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || |||||||| ||||| || || ||||| ||| || | || ||| || || || Sbjct 178 ATGCCTTCTTTATCTTGAATCTTCTGCTTGACATTATCAATGGTGTCAGAAGCCTCGACC 119 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | ||| | ||| ||||| ||||||||||| ||||| ||||||||| Sbjct 118 TCCAAAGTAATGGTTTTGCCTGTCAAAGTTTTGACGAAGATTTGCATT 71 Score = 141 bits (156), Expect = 9e-29 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || |||||||| |||||||| || || ||||| | ||||| | ||||||||| Sbjct 724 GTAGACTCTTTTTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCTTCCAATTGCTTGCCG 665 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || ||||| || ||||||||||| |||||||| ||||| || || ||||| Sbjct 664 GCAAAGATCAGACGCTGTTGATCGGGAGGAATGCCTTCTTTATCTTGAATCTTCTGCTTG 605 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || ||| || || || || | ||| | ||| ||||| ||||||||| Sbjct 604 ACATTATCAATGGTGTCAGAAGCCTCGACCTCCAAAGTAATGGTTTTGCCTGTCAAAGTT 545 Query 64427 TTTACGAAAATTTGCATT 64444 || ||||| ||||||||| Sbjct 544 TTCACGAAGATTTGCATT 527 Score = 120 bits (132), Expect = 3e-22 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || || || || |||| || | |||||||| Sbjct 496 GTNGANTCNTTNTGGATGTTGTAGTCGCTGAGNGTNCGGCCGTCNTCCAATTGCTTGCCN 437 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| |||||||| ||||||||||| |||||||| || || |||| ||||| Sbjct 436 GCNAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCTTTGTCCTGGNTTTTCTGCTTC 377 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || || || ||||| | || | || || ||||||||||| Sbjct 376 ACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTACCGGTCAAAGTN 317 Query 64427 TTTACGAAAATTTGCATT 64444 || ||||| ||||||||| Sbjct 316 TTGACGAAGATTTGCATT 299 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 |||||||| || | ||||| |||||||| ||||||||||| || || || || || ||| Sbjct 901 TGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCCTGGATT 842 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || ||||| ||| || | || || || || ||||| | || | || || ||| Sbjct 841 TTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTACCG 782 Query 64418 GTCAAAGTTTTTACGAAAATTTGCATT 64444 |||||||| || ||||| ||||||||| Sbjct 781 GTCAAAGTCTTGACGAAGATTTGCATT 755 >seq114236 Length=889 Score = 140 bits (154), Expect = 3e-28 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| || || | || | || || |||||||| |||||||| || Sbjct 363 ACCTCCTCTCAATCTCAGAACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCT 422 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| ||||||| | |||||||||||| | ||||| |||||||| |||||||| Sbjct 423 NAGAGTGCGGCCGTCTTCCAATTGCTTGCCGGCAAAGATGAGACGCTGCTGATCGGGAGG 482 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || ||||| ||||| ||| || | || || || || || Sbjct 483 AATGCCTTCCTTGTCCTGGATTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGAC 542 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||| | || | || ||||| |||||||| || ||||| ||||||||| Sbjct 543 TTCGAGGGTAATAGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCATT 591 Score = 111 bits (122), Expect = 2e-19 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 |||||||| || || |||||||| || | |||||| ||||||| | |||||| ||| Sbjct 166 GTCGATTCCTTCTGGATGTTGTAGTCGCTNAGGGTGCGGCCGTCTTCCAACTGCTTACCG 225 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || || || || || |||||||| |||||||| ||||| || || ||| Sbjct 226 GCGAAGATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTATCTTGAATCTTCGATTTT 285 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || ||| || || || || | ||| | || || ||||||||||| Sbjct 286 ACATTTTCGATGGTGTCAGAAGCCTCGACCTCCANAGTGATAGTTTTACCGGTCAAAGTC 345 Query 64427 TTTACGAAAATTTGCAT 64443 || || || |||||||| Sbjct 346 TTGACNAAGATTTGCAT 362 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 |||||||| || || |||||||| || | |||||| ||||||| | |||||| ||| Sbjct 622 GTCGATTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGGCCGTCTTCCAACTGCTTACCG 681 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || || || || || |||||||| |||||||| ||||| || || ||| Sbjct 682 GCGAAGATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTATCTTGAATCTTCGATTTT 741 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || ||| || || || || | ||| | || || ||||||||||| Sbjct 742 ACATTTTCGATGGTGTCAGAAGCCTCGACCTCCAAAGTGATAGTTTTACCGGTCAAAGTC 801 Query 64427 TTTACGAAAATTTGCAT 64443 || || || |||||||| Sbjct 802 TTGACAAAGATTTGCAT 818 Score = 89.7 bits (98), Expect = 5e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 ||||| |||||||| ||||||||||| ||||| || || || ||||| ||||| ||| Sbjct 4 ATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTCACATTA 63 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || || || || ||||| | || | || || ||||||||||| || ||| Sbjct 64 TCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTACCGGTCAAAGTCTTGACG 123 Query 64433 AAAATTTGCATT 64444 || ||||||||| Sbjct 124 AAGATTTGCATT 135 >seq1613 Length=19885 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| || | | ||| || ||||||| || |||||||||||||||||||| || || Sbjct 837 CCGCCTCGGAGACGAAGTACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAGTC-GCT 779 Query 64277 ACG-GTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | | || || | ||||| |||||||||||||| | || || |||||||| || ||||| Sbjct 778 AAGCGTACGGCCATCTTCCAGCTGCTTGCCGGCGAAGATTAGACGCTGCTGATCTGGAGG 719 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || || ||||| || || | || || ||| || || Sbjct 718 AATGCCTTCCTTGTCTTGGATCTTCTGCTTGACGTTATCGATGGTGTCCGAGGCTTCGAC 659 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||| || || | ||||||||||| |||||||| Sbjct 658 CTCAAGCGTGATCGTCTTTCCTGTGAGGGTTTTTACGAAGATTTGCAT 611 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||||||||| || ||||| || || ||| || | || || | ||||| || Sbjct 579 GTAGATTCTTTTTGGATATTGTAGTCACTGAGGGTACGGCCATCCTCCAATTGCTTACCA 520 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || || ||||| || |||||||| |||||||| || || ||||| ||||| Sbjct 519 GCGAAGATAAGACGTTGCTGATCAGGAGGAATCCCTTCTTTATCCTGAATTTTCTGCTTG 460 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || || || ||||| | ||| | ||| || ||||||| ||| Sbjct 459 ACATTATCGATGGTGTCGGAAGCCTCGACTTCAAGAGTAATGGTTTTTCCGGTCAGAGTC 400 Query 64427 TTTACGAAAATTTGCATT 64444 || |||||||| |||||| Sbjct 399 TTCACGAAAATCTGCATT 382 Score = 93.3 bits (102), Expect = 4e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||||| || || | || | || ||||| || || |||||||| || Sbjct 154 ACCACCTCTCAATCGTAGAACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGCT 95 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | || || | |||||||| || | ||||| |||||||| |||||||| Sbjct 94 GAGGGTGCGGCCATCCTCCAATTGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGG 35 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACA 64369 ||| ||||| || || || ||||| ||||| ||| Sbjct 34 AATGCCTTCCTTGTCCTGGATTTTCTGCTTCACA 1 >seq3604 Length=7407 Score = 87.8 bits (96), Expect = 2e-12 Identities = 435/680 (64%), Gaps = 21/680 (3%) Strand=Plus/Minus Query 154624 TGTATTGCACAATTTCTGCGCACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGAT 154683 |||||| ||||| || | ||| | ||| || | || |||||||| |||||||||| Sbjct 4455 TGTATTCTACAATCTCAGTGCAGAGATTCGAGCTTTTGATCGTGCCCAGATTTTTCTGAT 4396 Query 154684 TCGATTTGATGTTGCATGCGTCTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGG 154743 | ||||| ||||||| ||||||||||| | |||||||| || || ||||| | || | Sbjct 4395 TTGATTTTTTGTTGCAAGCGTCTTTGTAGAGCATGTACGGCGTACCGGTTTCGATCTGCG 4336 Query 154744 TTTCAATAATTGTGCGAAACAGACTTCGCGCCTCAACTTGACAAGTAAATCGATTTTC-- 154801 || || || | | |||| || |||| | | ||| | | ||| | | | Sbjct 4335 ACTCGATGATGGCGTACCACAGTTTTTGCGCTTTGA-TTGTC---TTCCTCGCTCTCCCT 4280 Query 154802 GC--TCTCATATTGTTCGTACAGTTTTTCAAACTCTAAACTGTACACGTCCGACAAACCG 154859 || | ||||| | ||||| || || ||||| || || || ||||| |||||| Sbjct 4279 GCTTTTTCATACTTCTCGTAAAGCTTATCAAATTCATCACCATAAACGTCGACCAAACC- 4221 Query 154860 GGACAGC--GGTCGGGACACATCAATGACCACATTTCGTTTTGTTGTACGCGTTTCATAA 154917 | || | ||| || | | ||||| | | || || || |||||||||| Sbjct 4220 -AATCGCTTCATTGGGGCAAAATAGCGACCAATCTCCATTGCTTTCAACCCGTTTCATAA 4162 Query 154918 ACAAATCCGGCACCCACAAAGCGTACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCA 154977 |||||||||| | ||||| ||||| || | || || || || || || ||| Sbjct 4161 ACAAATCCGGTATCCACATCGCGTAGAAAAGGTCCCGAGCTCTTGACTCATCTTTGCCGG 4102 Query 154978 TGTTTCGCTTTAAATTC-AAAAAATCATATATGTCGGCGTGCCACGGCTCTAAATATACG 155036 || ||| ||| || ||||| ||| | | || || |||||||| || | || || Sbjct 4101 TG-TTCTTTTTCGCGTCTAAAAAGTCAAAGACATCCGCATGCCACGGTTCGAGGTACACC 4043 Query 155037 GCCATCGCGCCTTTGCGTTTT----CCTCCTTGATCCACGTGACGCACACAATTATTGTA 155092 || | || || | || |||| || ||||| || |||| ||| | || ||||| Sbjct 4042 GCAAATGCACC-TGGCCTTTTATTACCGCCTTGGTCTACGTAACGTGCCGTGTTGTTGTA 3984 Query 155093 CACGCGCAACAATGGTTCCACGCCGCTGGCCGTGCCGTTGGTGCCACGTATCGCGCTGCC 155152 || |||| || || | ||| | | | ||||| ||||| || ||||| Sbjct 3983 AACACGCAGCATAGGCAAGAGACCGTTCGAGTTTCCGTTAGTGCCTGCGATATAACTGCC 3924 Query 155153 GCGAGCACGCGCTTTATGAACATTAACGCCCAAACCTCC-GCCGTATTTAGATATTTGCG 155211 || ||| | || || | | || | || || || || ||| || || | | Sbjct 3923 GCTAGCTCTAATGTTGGAAATGCTCAATCCAATCCCGCCAGCAGT-TTTGGAGATAAGAG 3865 Query 155212 CACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAACAAGA 155271 | || | | || |||||||| || || | ||||||||| |||| || || ||| || | Sbjct 3864 CGCACTGCTTTAAGGTTTCGTAGATGCCATCGATGCTGTCATCTTGCATCGCCAATAAAA 3805 Query 155272 AACACGAAGATAATTGAGGT 155291 | || |||||||||||| Sbjct 3804 AGCAACTGGATAATTGAGGT 3785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498894464667160