Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq116056 140 3e-28 seq3604 134 1e-26 seq1613 116 4e-21 seq114236 113 4e-20 seq114234 107 2e-18 >seq116056 Length=8111 Score = 140 bits (154), Expect = 3e-28 Identities = 489/751 (65%), Gaps = 17/751 (2%) Strand=Plus/Minus Query 153026 CTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAA 153085 ||| || || | || || ||||| | || ||| |||| | || | ||||||||| | Sbjct 2632 CTGATTTACAATCTGGAATTCGCCGGACAGCACACGTCGCGTGTAAATGTTGCTAGTGTA 2573 Query 153086 AGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGC 153145 || |||| || ||| ||||| || ||||||||||| |||| ||| || ||||| ||| Sbjct 2572 TGGCTCAATGGCTTCATTATTACCCAGTATTTGAGCAGTGGATGCTGTTGGCATCGGCGC 2513 Query 153146 CACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATC 153205 | || || |||||| || | |||||| | || | || ||||| | | |||||| Sbjct 2512 TAACAGCAGAGAATTGCGTACTCCGTGCTTTTTGATCTTCTCTTTCAAAGACGCCCAATC 2453 Query 153206 CCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGG 153265 ||||| | | || ||| || ||||| || |||||||| ||| | ||| || Sbjct 2452 CCACAAATCAGTGGGGGTCACGCCCCACAAATCATACTGTAATTGACCTTGGCTGATAGG 2393 Query 153266 ACTGCCGGCAAACGTACTGTAGCTGCCG-TCGCGTTGGGCCAGTTCGCAGCTAGCC-TCG 153323 | || || | | || ||| || | || || |||||||| || || Sbjct 2392 AGATCCCTCATAGCTCTCATACGGACCGCTCTC-TTCCGCAAGTTCGCAAGACGCTGTCA 2334 Query 153324 AGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGA---ACGGCCGCTTCTTCG 153380 | ||| | | || ||||| ||| |||| ||||| | |||| || | Sbjct 2333 AAGCCGCGAAA-TAAATGGTCTCGAATATTTCAACGTTGAGCTTCATGGCC---TCGGGG 2278 Query 153381 CTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCG 153440 || ||| | ||||| |||| || | ||||||||| ||||| || || | || | ||| Sbjct 2277 CTGTCGAATGGCATTCGCAACATGATAAAGGCGTCCGCCAGTCCTTGCACTCCAATACCG 2218 Query 153441 ATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCG 153500 || || || ||| || ||| |||||| | | ||| |||| ||| || Sbjct 2217 ATCGGACGGTGCCTCATGTTCGAATTCCTCGCTTGAGGCACGGGGTAGTAGTTGATGTCA 2158 Query 153501 ATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTA-AGTTTCTCGAAATC 153559 || |||||||| || || || || || || | || | || | ||| | |||||| Sbjct 2157 ATGATTTTGTTCAGATTCCGTGTGACGACCTTGCACA-CGTCGTACAATTTTTTGAAATC 2099 Query 153560 ATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGAC 153619 ||| | || | ||| | |||| |||| || || || || || |||||||| || Sbjct 2098 ATA---CTTTCCATCGTTGGTTACGTATCGGGGCAATGCGATCGAAGCGAGATTACACAC 2042 Query 153620 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTAT 153679 |||| ||| || | | |||| | || ||||| | |||||| || || ||| || Sbjct 2041 GGCCACCTCGTCCTTGCTGGTGTATTCTACAATCTCAGTGCAGAGATTTGAGCTTTTGAT 1982 Query 153680 GACGCCCAAATTTTGCTGATT-GCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACG 153738 ||||| || || ||||| | |||| | ||||| ||||||||| |||||||||||| Sbjct 1981 CGTGCCCAGATCTTTTTGATTTGATTTTTTG-TTGCAAGCGTCTTTGTAGAGCATGTACG 1923 Query 153739 GTCCGCCGGTCTCGACTTGCGTTTCGACGAT 153769 | ||||| |||| |||| |||| ||| Sbjct 1922 GCGTACCGGTTTCGATCTGCGACTCGATGAT 1892 >seq3604 Length=7407 Score = 134 bits (148), Expect = 1e-26 Identities = 488/751 (65%), Gaps = 17/751 (2%) Strand=Plus/Minus Query 153026 CTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAA 153085 ||| || || | || || ||||| | || ||| || | | || | ||||| ||| | Sbjct 5066 CTGATTTACAATCTGGAATTCGCCGGACAGCACACGACGCGTGTAAATGTTGCTGGTGTA 5007 Query 153086 AGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGC 153145 || |||| || ||| ||||| || ||||||||||| |||| ||| || ||||| ||| Sbjct 5006 TGGCTCAATGGCTTCATTATTACCCAGTATTTGAGCAGTGGATGCTGTTGGCATCGGCGC 4947 Query 153146 CACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATC 153205 | || || |||||| || | |||||| | || | || ||||| | | |||||| Sbjct 4946 TAACAGCAGAGAATTACGTACTCCGTGCTTTTTGATCTTCTCTTTCAAAGACGCCCAATC 4887 Query 153206 CCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGG 153265 ||||| | | || ||| || ||||| || |||||||| ||| | ||| | || Sbjct 4886 CCACAAATCAGTGGGGGTCACGCCCCACAAATCATACTGTAATTGACCTTGGCTGACAGG 4827 Query 153266 ACTGCCGGCAAACGTACTGTAGCTGCCG-TCGCGTTGGGCCAGTTCGCAGCTAGCC-TCG 153323 | || || | | || ||| || | || || |||||||| || || Sbjct 4826 AGATCCCTCATAGCTCTCATACGGACCGCTCTC-TTCCGCAAGTTCGCAAGACGCTGTCA 4768 Query 153324 AGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGA---ACGGCCGCTTCTTCG 153380 | ||| | | || ||||| ||| |||| ||||| | |||| || | Sbjct 4767 AAGCCGCGAAA-TAAATGGTCTCGAATATTTCAACGTTGAGCTTCATGGCC---TCGGGG 4712 Query 153381 CTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCG 153440 || || ||||||| |||| || | ||||||||| || || || || | || | ||| Sbjct 4711 CTGTCAAACGGCATTCGCAACATGATAAAGGCGTCCGCGAGCCCTTGCACTCCAATACCG 4652 Query 153441 ATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCG 153500 || || || ||| || ||| |||||| | || || |||| ||| || Sbjct 4651 ATTGGACGGTGCCTCATGTTCGAATTCCTCGCTTGAGGTACAGGGTAGTAGTTGATGTCA 4592 Query 153501 ATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTA-AGTTTCTCGAAATC 153559 || |||||||| || || || || || || | || | || | ||| | |||||| Sbjct 4591 ATGATTTTGTTCAGATTCCGTGTGACTACCTTGCACA-CGTCGTACAATTTTTTGAAATC 4533 Query 153560 ATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGAC 153619 ||| | || ||||| | ||| | || || || || || || |||||||| || Sbjct 4532 ATA---CTTTCCGTCGTTGGTTACATAACGGGGCAATGCGATCGAAGCGAGATTACATAC 4476 Query 153620 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTAT 153679 |||| ||| || | | |||| | || ||||| | |||||| || || ||| || Sbjct 4475 GGCCACCTCGTCCTTGCTGGTGTATTCTACAATCTCAGTGCAGAGATTCGAGCTTTTGAT 4416 Query 153680 GACGCCCAAATTTTGCTGATT-GCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACG 153738 ||||| ||||| |||||| | |||| | ||||| ||||||||| |||||||||||| Sbjct 4415 CGTGCCCAGATTTTTCTGATTTGATTTTTTG-TTGCAAGCGTCTTTGTAGAGCATGTACG 4357 Query 153739 GTCCGCCGGTCTCGACTTGCGTTTCGACGAT 153769 | ||||| |||| |||| |||| ||| Sbjct 4356 GCGTACCGGTTTCGATCTGCGACTCGATGAT 4326 >seq1613 Length=19885 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || | ||| ||||| || || || | | || |||||||| |||||||||||||| Sbjct 381 CCACCCCTCAATCGCAAGACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCGCTG 322 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || | ||| || || | |||| ||||||||||| || ||||| Sbjct 321 AGGGTGCGGCCATCTTCCAATTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGG 262 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| ||||| |||||| || || | | || | |||||| | | ||| ||| Sbjct 261 ATACCTTCCTTGTCCTGGATTTTCTGCTTGACATTATCGATGGTGTCAGAAGCCTCAACC 202 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | |||||||| || ||||| || ||||| || ||||| Sbjct 201 TCCAGAGTGATGGTTTTACCGGTAAGAGTCTTGACAAAGATTTGCAT 155 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 |||||||| | ||| | || | ||| | | || || |||||||||||||||||||| Sbjct 837 CCGCCTCGGAGACGAAGTACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGCTA 778 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || || || || |||| ||||||||||||| || || ||||| Sbjct 777 AGCGTACGGCCATCTTCCAGCTGCTTGCCGGCGAAGATTAGACGCTGCTGATCTGGAGGA 718 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || || || | | || | |||||| | | || ||| Sbjct 717 ATGCCTTCCTTGTCTTGGATCTTCTGCTTGACGTTATCGATGGTGTCCGAGGCTTCGACC 658 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | ||| | ||| || || || || |||||||| || || |||||| Sbjct 657 TCAAGCGTGATCGTCTTTCCTGTGAGGGTTTTTACGAAGATTTGCATG 610 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || ||||| || |||||||| || | ||||| ||||| | ||| ||||| | Sbjct 576 GATTCTTTTTGGATATTGTAGTCACTGAGGGTACGGCCATCCTCCAATTGCTTACCAGCG 517 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||| || || || ||||| || |||||||| || ||||| || || | Sbjct 516 AAGATAAGACGTTGCTGATCAGGAGGAATCCCTTCTTTATCCTGAATTTTCTGCTTGACA 457 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| | ||| || || | || | ||||| || |||||||| || Sbjct 456 TTATCGATGGTGTCGGAAGCCTCGACTTCAAGAGTAATGGTTTTTCCGGTCAGAGTCTTC 397 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 396 ACGAAAATCTGCAT 383 >seq114236 Length=889 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | || ||| || || | | ||||| ||||| |||||||||||||| Sbjct 364 CCTCCTCTCAATCTCAGAACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTN 423 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||| || | ||| || |||| | |||| |||||||| || || ||||| Sbjct 424 AGAGTGCGGCCGTCTTCCAATTGCTTGCCGGCAAAGATGAGACGCTGCTGATCGGGAGGA 483 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| |||||| || || | | || | ||||| | | ||| || Sbjct 484 ATGCCTTCCTTGTCCTGGATTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACT 543 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | ||||| || |||| ||| || || || || ||||| Sbjct 544 TCGAGGGTAATAGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 590 Score = 105 bits (116), Expect = 7e-18 Identities = 142/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || |||||||||||||| | || || ||| || | || ||||||| Sbjct 625 GATTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGGCCGTCTTCCAACTGCTTACCGGCG 684 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 |||| ||||| ||||| || ||||| || |||||||| || ||| | || | ||||| Sbjct 685 AAGATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTATC-TTGAATCTTCGATTTTAC 743 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | ||| | |||||| | | ||| ||||| | || | |||||||| |||| ||| || Sbjct 744 ATTTTCGATGGTGTCAGAAGCCTCGACCTCCAAAGTGATAGTTTTACCGGTCAAAGTCTT 803 Query 138600 TACAAAAATCTGCAT 138614 ||||| || ||||| Sbjct 804 GACAAAGATTTGCAT 818 Score = 104 bits (114), Expect = 2e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || |||||||||||||| | || || ||| || | || ||||||| Sbjct 169 GATTCCTTCTGGATGTTGTAGTCGCTNAGGGTGCGGCCGTCTTCCAACTGCTTACCGGCG 228 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 |||| ||||| ||||| || ||||| || |||||||| || ||| | || | ||||| Sbjct 229 AAGATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTATC-TTGAATCTTCGATTTTAC 287 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | ||| | |||||| | | ||| ||||| | || | |||||||| |||| ||| || Sbjct 288 ATTTTCGATGGTGTCAGAAGCCTCGACCTCCANAGTGATAGTTTTACCGGTCAAAGTCTT 347 Query 138600 TACAAAAATCTGCAT 138614 || || || ||||| Sbjct 348 GACNAAGATTTGCAT 362 >seq114234 Length=910 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| ||||| |||||||||||||| | ||| || ||| || | ||| || |||| Sbjct 265 GACTCTTTTTGGATGTTGTAGTCGCTGAGAGTGCGGCCGTCTTCCAATTGCTTGCCGGCG 206 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||||||||| || ||||| || |||||||| || || || || || | Sbjct 205 AAGATGAGACGCTGTTGATCGGGAGGAATGCCTTCTTTATCTTGAATCTTCTGCTTGACA 146 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | ||| ||||| | || | ||||| || |||| |||||| Sbjct 145 TTATCAATGGTGTCAGAAGCCTCGACCTCCAAAGTAATGGTTTTGCCTGTCAAAGTTTTG 86 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 85 ACGAAGATTTGCAT 72 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| ||||| |||||||||||||| | ||| || || || | ||| || |||| | Sbjct 721 GACTCTTTTTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCTTCCAATTGCTTGCCGGCA 662 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||||||||| || ||||| || |||||||| || || || || || | Sbjct 661 AAGATCAGACGCTGTTGATCGGGAGGAATGCCTTCTTTATCTTGAATCTTCTGCTTGACA 602 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | ||| ||||| | || | ||||| || |||| |||||| Sbjct 601 TTATCAATGGTGTCAGAAGCCTCGACCTCCAAAGTAATGGTTTTGCCTGTCAAAGTTTTC 542 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 541 ACGAAGATTTGCAT 528 Score = 98.7 bits (108), Expect = 1e-15 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || || |||||||||||||| | || || ||| || | ||| || || | Sbjct 493 GANTCNTTNTGGATGTTGTAGTCGCTGAGNGTNCGGCCGTCNTCCAATTGCTTGCCNGCN 434 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| || || ||||| || ||||||||||| | |||| || || | Sbjct 433 AAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCTTTGTCCTGGNTTTTCTGCTTCACA 374 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | | ||| || |||| || | |||||||| |||| ||| || Sbjct 373 TTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTACCGGTCAAAGTNTTG 314 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 313 ACGAAGATTTGCAT 300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495517144144080