Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07]
120,139 sequences; 579,633,380 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq116056 176 6e-39
seq3604 143 3e-29
>seq116056
Length=8111
Score = 176 bits (194), Expect = 6e-39
Identities = 1130/1781 (63%), Gaps = 47/1781 (3%)
Strand=Plus/Minus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
||||||| |||| | ||| | ||| | ||| || || ||||||||||||||||| |
Sbjct 2966 TGAACTGGATGGCTTGAGCCGCCGGCTTCGTTCGAAGATAATACATCCCCGTCTTGAGTC 2907
Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCC-ATG 115644
| |||||| | || | |||||| || ||||||| | ||| | || | |||
Sbjct 2906 CGACCTTCCACCCGTAAAAATGCATGCTGGTCAACTTGCCGTA-GTTAGGCTCGGCGATG 2848
Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704
| ||||| |||||| ||| |||||| | || |||| || || ||||| | ||
Sbjct 2847 TGAATGTTCAAACTTTGACTTTGGTCGATGTACGGTGCCCGGTCGGCAGCCATTTTGATG 2788
Query 115705 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 115764
| | |||| | || |||||||| || | || | ||||| ||||| || || ||
Sbjct 2787 ATGTTCTTCTGCGAAATCTCCCACACGGTACGATACAATTTCTTCATATCCTCAGGAATC 2728
Query 115765 TCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCC---TTCATATCCTTT 115821
| ||| ||||| || || || || || | ||||| | | || | ||| |
Sbjct 2727 TGAGGGATGTTTTGAATCGAACCGT-TG--TTAGCGATGAGCTGCAACTTTACATCATCG 2671
Query 115822 GACCAGAGACCAATCTTCT-TGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTC 115880
||||| ||| | |||| | | |||| | | ||| ||| |||| || ||
Sbjct 2670 TTCCAGATACCTCT-TTCTGTCAAATCCATGAGTAAACGCTGATTTACAATCTGGAATTC 2612
Query 115881 ACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTT 115940
|| | || |||| | || |||||| | ||||||||||||| | ||||| ||
Sbjct 2611 GCCGGACAGCACACGTCGCGTGTAAATGTTGCTAGTGTATGGCTCAATGGCTTCATTATT 2552
Query 115941 ACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAG 116000
||||| ||||| || ||||| ||||| ||||| || || | || || ||||| |
Sbjct 2551 ACCCAGTATTTGAGCAGTGGATGCTGTTGGCATCGGCGCTAACAGCAGAGAATTGCGTAC 2492
Query 116001 ACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGT--TGAGCTTTGTCTCC 116058
|| | | || || || | | |||| || | | || | | ||
Sbjct 2491 TCCGTGCTTTTTGATCTTCTCTTTCAAAGACGCCCAATCCCACAAATCAG-TGGGGGTCA 2433
Query 116059 CCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCA 116118
| | |||||| |||| |||| | ||||||| || ||||||||| | |||||
Sbjct 2432 CGC-CCCACAAATCATACTGTAATTGACCTTGGCTGATAGGAGATCCCTCATAGCTCTCA 2374
Query 116119 TATGGGCC-CTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGT 116177
|| || || ||| | ||||| | |||| | ||| | || ||| ||| || ||
Sbjct 2373 TACGGACCGCTCT-CTTCCGCAAGTTCGCAAGACGCTGTCAAAGCCGCGAAATAAATGGT 2315
Query 116178 CTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA 116237
||| || || | | || | | |||||||| | || || | | || |||
Sbjct 2314 CTCGAATATTTCAACGTTGAGCTTCATGGCCTCGGGGCTGTCGAATGGCATTCGCAACAT 2255
Query 116238 AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 116297
||||| | ||||| || ||||| || || | || || || || || ||||| || ||
Sbjct 2254 GATAAAGGCGTCCGCCAGTCCTTGCACTCCAATACCGATCGGACGGTGCCTCATGTTCGA 2195
Query 116298 CTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 116357
|| | || |||||| || | || | || || | | || ||||| ||
Sbjct 2194 ATTCCTCGCTTGAGGCACGGGGTAGTAGTTGATGTCAATGATTTTGTTCAGATTCCGTGT 2135
Query 116358 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC 116417
||| ||||| | || | | |||| | ||||| | | | | || | | ||
Sbjct 2134 GACGACCTTGCACACGTCGTACAATTTTTTGAAATCATACTTTCCA---TCGTTGGTTAC 2078
Query 116418 ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTA 116477
|| || | ||||| || || ||||||||||| | ||| ||||| |||||
Sbjct 2077 GTATCGGGGCAATGCGATCGAAGCGAGATTACACACGGCCACCTCGTCCTTGCTGGTGTA 2018
Query 116478 CTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGA 116537
|||| ||| || || || | |||||| || || || ||||||| | |||||||||||
Sbjct 2017 TTCTACAATCTCAGTGCAGAGATTTGAGCTTTTGATCGTGCCCAGATCTTTTTGATTTGA 1958
Query 116538 CTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTT 116597
||| |||| || || || ||||||||||| || ||||| || || || | || ||||
Sbjct 1957 TTTTTTGTTGCAAGCGTCTTTGTAGAGCATGTACGGCGTACCGGTTTCGATCTGCGACTC 1898
Query 116598 GAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGT--TGGCTCGCCCCTCCTC 116654
|| || || | ||||| | ||| | | | || | | | |||| ||| | |
Sbjct 1897 GATGATGGCGTACCATAGTTTTTGCGCTTTG---ATTGTCTTCCTCGCTCTCCCTGCTTT 1841
Query 116655 CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGC 116714
|| ||||| |||||| |||||||| ||||| | || | ||| ||
Sbjct 1840 TTCATACTTCTCGTAGAGCTTATCAAACTCATCACCATATACGTCGACCAAACCTATCGC 1781
Query 116715 CTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 116774
| || || || || || ||||| | ||| |||||||| ||||| || | ||
Sbjct 1780 TTCATTGGGGCAAAATAGCGACCAATCCCCATTGCTTTCAACCCGTTTCATAAACAAATC 1721
Query 116775 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTC-ATCCCCCTGAT-TG 116832
|| ||||| | ||| |||| || ||||| | | ||| || | ||| || | |
Sbjct 1720 CGGTATCCACATCGCGTAGAAAAGGTCCCGTGCCCTTGATTCATCTTTGCCCGTGTTCTT 1661
Query 116833 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 116892
||| || |||||||| | || |||||| |||||||| || ||||||||||||| |
Sbjct 1660 TTTCGC--GTCTAAAAAGTCAAAGACATCCGCATGCCACGGCTCGAGGTACACCGCGAAT 1603
Query 116893 G-ACC---CCTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCG 116948
| ||| |||| | ||| | |||| ||| || | || || ||| | || ||
Sbjct 1602 GCACCTGGCCTT-TTATTACCGCCTTGGTCTACGTAACGTGCTGTGTTATTATAAACACG 1544
Query 116949 AAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTG 117006
||||| || | || ||| | || | || || || || ||| ||| | | | |
Sbjct 1543 CAGCATGGGCAAGAGACCGTTGGAGTTTCCGTTGGTGCCTGCGATATAACTGCC--GCTA 1486
Query 117007 GCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCAC 117066
||||| | | | ||| || ||||| || || || || ||||| | ||||||
Sbjct 1485 GCTCTAATGTTGGAAATGCTCAATCCAATCCCGCCAGCAGTTTTGGAGATAAGAGCGCAC 1426
Query 117067 TCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAG 117126
| | | | | ||||||| |||||||| |||| | | | || | | |||||
Sbjct 1425 TGCTTTAAGGTTTCGTAGATGCCATCGATGCTGTCATCTTGCATCGCCAATAAAAAGCAA 1366
Query 117127 CTCGACATTTGTGGCC--TTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGA 117184
|| || | ||| || | |||||| ||||||||||| || || |||| ||| ||| |||
Sbjct 1365 CTGGATAATTGAGGTCTATTGGTG--CCAGCGTTGAATAGAGTGGGTGACGCATGGGTGA 1308
Query 117185 ACATACCT-TGGGACATCTTATCGTAGGTCTCCA-AGACAGAGGGAATGTCTTCCCCGTG 117242
|| || | | ||||| || |||||| || | || || | || | ||| || ||
Sbjct 1307 AC-CACTTCTCAGACATAAGATTGTAGGTTTCAATAGCGCGATCG-ATATTTTCGCCATG 1250
Query 117243 AATACCGATTGAGACCCGCATAAACATGTATTG-GGGTGTT 117282
|| ||||| ||||| | ||| | ||||| ||| ||| |||
Sbjct 1249 GATGCCGATGGAGACTCTCATTAGCATGTGTTGCGGGCGTT 1209
>seq3604
Length=7407
Score = 143 bits (158), Expect = 3e-29
Identities = 794/1241 (64%), Gaps = 41/1241 (3%)
Strand=Plus/Minus
Query 116063 CCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATG 116122
|||||| |||| |||| | ||||||| | || ||||||||| | ||||||| |
Sbjct 4863 CCCACAAATCATACTGTAATTGACCTTGGCTGACAGGAGATCCCTCATAGCTCTCATACG 4804
Query 116123 GGCC-CTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCA 116181
| || ||| | ||||| | |||| | ||| | || ||| ||| || |||||
Sbjct 4803 GACCGCTCT-CTTCCGCAAGTTCGCAAGACGCTGTCAAAGCCGCGAAATAAATGGTCTCG 4745
Query 116182 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATA 116241
|| || | | || | | |||||||| | ||||||| | || ||| |||
Sbjct 4744 AATATTTCAACGTTGAGCTTCATGGCCTCGGGGCTGTCAAACGGCATTCGCAACATGATA 4685
Query 116242 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTT 116301
|| | |||||||| ||||| || || | || ||||| || || ||||| || || ||
Sbjct 4684 AAGGCGTCCGCGAGCCCTTGCACTCCAATACCGATTGGACGGTGCCTCATGTTCGAATTC 4625
Query 116302 CGAGC----GGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 116357
| || ||| || || || | || | || || | | || ||||| ||
Sbjct 4624 CTCGCTTGAGGT----ACAGGGTAGTAGTTGATGTCAATGATTTTGTTCAGATTCCGTGT 4569
Query 116358 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC 116417
||| ||||| | || | | |||| | ||||| | | | ||| || || ||
Sbjct 4568 GACTACCTTGCACACGTCGTACAATTTTTTGAAATCATACTTTCC-GTCG-TTGGTT-AC 4512
Query 116418 ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTA 116477
||| || | ||||| || || |||||||| || | ||| ||||| |||||
Sbjct 4511 ATAACGGGGCAATGCGATCGAAGCGAGATTACATACGGCCACCTCGTCCTTGCTGGTGTA 4452
Query 116478 CTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGA 116537
|||| ||| || || || | ||| || || || || ||||||| || || ||||||||
Sbjct 4451 TTCTACAATCTCAGTGCAGAGATTCGAGCTTTTGATCGTGCCCAGATTTTTCTGATTTGA 4392
Query 116538 CTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTT 116597
||| |||| || || || ||||||||||| || ||||| || || || | || ||||
Sbjct 4391 TTTTTTGTTGCAAGCGTCTTTGTAGAGCATGTACGGCGTACCGGTTTCGATCTGCGACTC 4332
Query 116598 GAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGT--TGGCTCGCCCCTCCTC 116654
|| || || | ||| | | ||| | | | || | | | |||| ||| | |
Sbjct 4331 GATGATGGCGTACCACAGTTTTTGCGCTTTG---ATTGTCTTCCTCGCTCTCCCTGCTTT 4275
Query 116655 CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGC 116714
|| ||||| ||| || ||||| || ||||| | | || | || ||
Sbjct 4274 TTCATACTTCTCGTAAAGCTTATCAAATTCATCACCATAAACGTCGACCAAACCAATCGC 4215
Query 116715 CTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 116774
| || || || || || ||||| | ||| |||||||| ||||| || | ||
Sbjct 4214 TTCATTGGGGCAAAATAGCGACCAATCTCCATTGCTTTCAACCCGTTTCATAAACAAATC 4155
Query 116775 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTC-ATCCCCCTGAT-TG 116832
|| ||||| | ||| |||| || |||||| | | || || | || || | |
Sbjct 4154 CGGTATCCACATCGCGTAGAAAAGGTCCCGAGCTCTTGACTCATCTTTGCCGGTGTTCTT 4095
Query 116833 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 116892
||| || |||||||| | || |||||| ||||||||||| ||||||||||| | |
Sbjct 4094 TTTCGC--GTCTAAAAAGTCAAAGACATCCGCATGCCACGGTTCGAGGTACACCGCAAAT 4037
Query 116893 G-ACC---CCTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCG 116948
| ||| |||| | ||| | |||| ||| || | ||||| ||| | || ||
Sbjct 4036 GCACCTGGCCTT-TTATTACCGCCTTGGTCTACGTAACGTGCCGTGTTGTTGTAAACACG 3978
Query 116949 AAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTG 117006
||||| || | || ||| | || | || || || || ||| ||| | | | |
Sbjct 3977 CAGCATAGGCAAGAGACCGTTCGAGTTTCCGTTAGTGCCTGCGATATAACTGCC--GCTA 3920
Query 117007 GCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCAC 117066
||||| | | | ||| || ||||| || || || || ||||| | ||||||
Sbjct 3919 GCTCTAATGTTGGAAATGCTCAATCCAATCCCGCCAGCAGTTTTGGAGATAAGAGCGCAC 3860
Query 117067 TCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAG 117126
| | | | | ||||||| |||||||| |||| | | | || | | |||||
Sbjct 3859 TGCTTTAAGGTTTCGTAGATGCCATCGATGCTGTCATCTTGCATCGCCAATAAAAAGCAA 3800
Query 117127 CTCGACATTTGTGGCC--TTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGA 117184
|| || | ||| || | |||||| ||||||||||| || || |||| ||| ||| |||
Sbjct 3799 CTGGATAATTGAGGTCTATTGGTG--CCAGCGTTGAATAGAGTGGGTGACGCATGGGTGA 3742
Query 117185 ACATACCT-TGGGACATCTTATCGTAGGTCTCCA-AGACAGAGGGAATGTCTTCCCCGTG 117242
|| || | | ||||| || |||||| || | || || | || | ||| || ||
Sbjct 3741 AC-CACTTCTCAGACATAAGATTGTAGGTTTCAATAGCGCGATCG-ATATTTTCGCCATG 3684
Query 117243 AATACCGATTGAGACCCGCATAAACATGTATTG-GGGTGTT 117282
|| ||||| ||||| | ||| | ||||| ||| ||| |||
Sbjct 3683 GATGCCGATGGAGACTCTCATTAGCATGTGTTGCGGGCGTT 3643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 612585873231240
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |