Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq116056 185 1e-41 seq3604 172 7e-38 >seq116056 Length=8111 Score = 185 bits (204), Expect = 1e-41 Identities = 1114/1757 (63%), Gaps = 56/1757 (3%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| || ||||| | ||| | ||| | ||||| |||||||| ||| |||| ||| | Sbjct 1213 CCCGCAACACATGCTAATGAGAGTCTCCATCGGCATCCATGGCGAAAATATCGATCGCGC 1272 Query 111671 TTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCT 111729 | | || || ||| | ||||| | || ||||| ||| || |||| || || | Sbjct 1273 TATTGAAACCTACAATCTTATGTCTGAGAAGTG-GTTCACCCATGCGTCACCCACTCTAT 1331 Query 111730 TCAACGCTGGTACACCAA--GACCCCAAATGTCCAGTTGTTTCCTTATTG-CAAACAAGG 111786 |||||||||| |||||| |||| ||| | |||||||| || |||||| | | | | Sbjct 1332 TCAACGCTGG--CACCAATAGACCTCAATTATCCAGTTGCTTT-TTATTGGCGATGCAAG 1388 Query 111787 AGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGG 111846 | || ||| ||||||| |||| || | | | || || | ||||| || | Sbjct 1389 ATGACAGCATCGATGGCATCTACGAAACCTTAAAGCAGTGCGCTCTTATCTCCAAAACTG 1448 Query 111847 CTGGTGGTATCGGGATGCACAT--CCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGG 111904 |||| || || || || ||| ||| || ||||| | | | ||| ||| Sbjct 1449 CTGGCGGGATTGGATTGAGCATTTCCAACATT--AGAGCTAGCGGCAGTTATATCGCAGG 1506 Query 111905 TACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 111964 || || || | || | ||| | | || ||||| || || | ||| |||||| || Sbjct 1507 CACCAACGGAAACTCCAACGGTCTCTTGCCCATGCTGCGTGTTTATAATAACACAGCACG 1566 Query 111965 CTATGTAAACCAAGCTGGGCGTCGCAAG---GGATCTATCGCAGTCTATCTTGAGCCATG 112021 || ||| |||||| || | | | || | |||| || || || ||||| || Sbjct 1567 TTACGTAGACCAAGGCGGTAATAAAAGGCCAGGTGCATTCGCGGTGTACCTCGAGCCGTG 1626 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCA--ACCAAGGTGATGAGGAGGCG 112079 ||| |||||| || | || || || || ||| | || || | || || | Sbjct 1627 GCATGCGGATGTCTTTGACTT--TTTAGACGCGAAAAAGAACACGGGCAAAGATGAATCA 1684 Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139 || || || || |||| ||| | ||||| || ||| | || ||||| | ||||| Sbjct 1685 AGGGCACGGGACCTTTTCTACGCGATGTGGATACCGGATTTGTTTATGAAACGGGTTGAA 1744 Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG 112199 | ||| ||||||| || ||||| || | | || ||| | ||| | Sbjct 1745 AGCAATGGGGATTGGTCGCTATTTTGCCCCAATGAAGCGATAGGTTTGGTCGACGTATAT 1804 Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACG 112259 ||||| |||||||| |||||| ||||| || ||| | | | |||| ||| Sbjct 1805 GGTGATGAGTTTGATAAGCTCTACGAGAAGTATGAAAAAGCAGGGAGAGCGAGGAAGACA 1864 Query 112260 GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 | ||| | | ||| | || || || |||| || | ||| || ||||| || Sbjct 1865 ATCAAAGCGCAAAAACTATGGTACGCCATCATCGAGTCGCAGATCGAAACCGGTACGCCG 1924 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 || ||||| ||||||||||| || ||| |||| |||||||| || |||| |||| Sbjct 1925 TACATGCTCTACAAAGACGCTTGCAACAAAAAATCAAATCAAAAAGATCTGGGCACGATC 1984 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439 || || || || ||||| || || || | |||| || ||| || ||| ||| ||| Sbjct 1985 AAAAGCTCAAATCTCTGCACTGAGATTGTAGAATACACCAGCAAGGACGAGGTGGCCGTG 2044 Query 112440 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCA--GAGACAAAGACATTTG 112497 ||||| ||||| || ||||| | ||| || || | ||| || |||| | || Sbjct 2045 TGTAATCTCGCTTCGATCGCATTGCCCCGATACGT--AACCAACGATGGAAAG---TATG 2099 Query 112498 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTG 112557 ||| ||||| | |||| || || |||||| || || |||| | | |||| Sbjct 2100 ATTTCAAAAAATTGTACGACGTGTGCAAGGTCGTCACACGGAATCTGAACAAAATCATTG 2159 Query 112558 ATAGAAATTTTTACCCCGTTGAGACT---GCTCGTAAATCTAATATGAGACACCGTCCAA 112614 | | || | |||||||| | || || | || || || ||||| |||||||| | Sbjct 2160 ACATCAACTACTACCCCGT---GCCTCAAGCGAGGAATTCGAACATGAGGCACCGTCCGA 2216 Query 112615 TTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATT 112674 | ||| | || || ||||| || ||||| | || || | | || |||| || Sbjct 2217 TCGGTATTGGAGTGCAAGGACTGGCGGACGCCTTTATCATGTTGCGAATGCCATTCGACA 2276 Query 112675 CCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTG 112734 | ||| || | | | |||| | ||||| ||||| || ||| ||| ||| ||| Sbjct 2277 GCCCCGAGGCCATGAAGCTCAACGTTGAAATATTCGAGACCATTTATTTCGCGGCT-TTG 2335 Query 112735 A-GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC- 112792 | ||| || || | || || | ||||| ||||| | || |||||| ||||| Sbjct 2336 ACAGCGTCTTGCGAACTTGCGGAAGAGAGCGGTCCGTATGAGAGCTATGAGGGATCTCCT 2395 Query 112793 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTAC 112850 | | | ||||| | || | |||| |||||| |||| || | || | | Sbjct 2396 ATCAGC-CAAGGTCAATTACAGTATGATTTGTGGG-GCGTGACCCCCA-CTGATTTGTGG 2452 Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910 || |||| || | || || ||||| || | || | || || ||| || | Sbjct 2453 GATTGGGCGTCTTTGAAAGAGAAGATCAAAAAGCACGGAGTACGCAATTCTCTGCTGTTA 2512 Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970 || || ||||||||||| ||||| || ||||| |||||||||||||| | |||| || Sbjct 2513 GCGCCGATGCCAACAGCATCCACTGCTCAAATACTGGGTAATAATGAAGCCATTGAGCCA 2572 Query 112971 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAG 113030 ||||| | ||||| || | || | || | || || || |||||| || || Sbjct 2573 TACACTAGCAACATTTACACGCGACGTGTGCTGTCCGGCGAATTCCAGATTGTAAATCAG 2632 Query 113031 CAT---CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAA---GGAT 113084 | | ||| ||||| | | ||| | ||| ||||| | | ||| | || | | Sbjct 2633 CGTTTACTCATGGAT---TTGACAGAAAGAGGTATCTGGAACGATGATGTAAAGTTGCAG 2689 Query 113085 CTCAT-GGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAA 113143 ||||| | | | | | ||||| |||||||| || | ||||| || || || || Sbjct 2690 CTCATCGCTAACAAC----GGTTCGATTCAAAACATCCCTCAGATTCCTGAGGATATGAA 2745 Query 113144 GAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGA 113203 ||| ||||| || || || ||||| || | |||| | |||| | ||||| || || Sbjct 2746 GAAATTGTATCGTACCGTGTGGGAGATTTCGCAGAAGAACATCATCAAAATGGCTGCCGA 2805 Query 113204 TCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCAT-GGAAAGTCCAACGA 113262 || | | | ||| || |||||||||||| |||| | ||| | || | ||| | Sbjct 2806 CCGGGCACCGTACATCGACCAAAGTCAAAGTTTGAACATTCACATCGCCGAGCCTAACTA 2865 Query 113263 TGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGT 113322 | |||| | | ||||| | ||| | |||||| || ||||| |||||||||| Sbjct 2866 CG-GCAAGTTGACCAGCATGCATTTTTACGGGTGGAAGGTCGGACTCAAGACGGGGATGT 2924 Query 113323 ATTACCTCCGATCTAAG 113339 |||| || ||| | ||| Sbjct 2925 ATTATCTTCGAACGAAG 2941 >seq3604 Length=7407 Score = 172 bits (190), Expect = 7e-38 Identities = 711/1104 (64%), Gaps = 33/1104 (3%) Strand=Plus/Plus Query 112276 TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAG 112335 ||||| | || || || |||| || | ||| || ||||| || || ||||| ||||||| Sbjct 4315 TGTGGTACGCCATCATCGAGTCGCAGATCGAAACCGGTACGCCGTACATGCTCTACAAAG 4374 Query 112336 ACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCT 112395 |||| || ||| |||| ||||| || ||| |||| |||||| || || || |||| Sbjct 4375 ACGCTTGCAACAAAAAATCAAATCAGAAAAATCTGGGCACGATCAAAAGCTCGAATCTCT 4434 Query 112396 GTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAA 112455 | || || || | |||| || ||| || ||| ||| || ||||| ||||| || | Sbjct 4435 GCACTGAGATTGTAGAATACACCAGCAAGGACGAGGTGGCCGTATGTAATCTCGCTTCGA 4494 Query 112456 TCGCTCTCCCCAAGTATGTGGATCCAGAGAC--AAAGACATTTGATTATGAAAAACTCCA 112513 |||| | ||| ||||| | ||| ||| |||| | ||||| ||||| | | Sbjct 4495 TCGCATTGCCCCGTTATGT--AACCAACGACGGAAAG---TATGATTTCAAAAAATTGTA 4549 Query 112514 CGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCC 112573 ||| || || |||||| || || |||| | | ||||| | || | ||||| Sbjct 4550 CGACGTGTGCAAGGTAGTCACACGGAATCTGAACAAAATCATTGACATCAACTACTACCC 4609 Query 112574 CGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGG 112633 || || | || || || ||||| ||||||||||| ||| | || || ||||| Sbjct 4610 TGTACCTCAAGCGAGGAATTCGAACATGAGGCACCGTCCAATCGGTATTGGAGTGCAAGG 4669 Query 112634 TCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAAT 112693 |||||||| | || || | | || | ||||| | ||| || | | | | Sbjct 4670 GCTCGCGGACGCCTTTATCATGTTGCGAATGCCGTTTGACAGCCCCGAGGCCATGAAGCT 4729 Query 112694 CAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA-GGCGAGTTCGGAGTTGG 112752 ||| | ||||| ||||| || ||| ||| ||| |||| ||| || || | | Sbjct 4730 CAACGTTGAAATATTCGAGACCATTTATTTCGCGGCT-TTGACAGCGTCTTGCGAACTTG 4788 Query 112753 CAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA--CAAGGGGTGCT 112810 | || | ||||| ||||| | || |||||| ||||| | ||| ||||| | Sbjct 4789 CGGAAGAGAGCGGTCCGTATGAGAGCTATGAGGGATCTCCTG--TCAGCCAAGGTCAATT 4846 Query 112811 TCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGACGCTCTCAAG 112868 || | |||| |||||| |||| || | || | | || |||| || | || Sbjct 4847 ACAGTATGATTTGTGGG-GCGTGACCCCCA-CTGATTTGTGGGATTGGGCGTCTTTGAAA 4904 Query 112869 GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCC 112928 || ||||| || | || | ||||| ||| || | || || ||||||||||| Sbjct 4905 GAGAAGATCAAAAAGCACGGAGTACGTAATTCTCTGCTGTTAGCGCCGATGCCAACAGCA 4964 Query 112929 TCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTAT 112988 ||||| || ||||| |||||||||||||| | |||| || ||||| | ||||| || Sbjct 4965 TCCACTGCTCAAATACTGGGTAATAATGAAGCCATTGAGCCATACACCAGCAACATTTAC 5024 Query 112989 CTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT---CTCGTGGATGAC 113045 | | | || | || || || |||||| || ||||| ||| ||||| Sbjct 5025 ACGCGTCGTGTGCTGTCCGGCGAATTCCAGATTGTAAATCAGCATCTACTCATGGAT--- 5081 Query 113046 CTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAA---GGATCTCATGGTGAA-AGCGGG 113101 | | ||| | ||| ||||| | | || | || | | || || | || | | Sbjct 5082 TTGACAGAAAGAGGTATCTGGAACGATGACGTAAAGTTGCAGCTTATCGCAAACAAC--- 5138 Query 113102 TGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGT 113161 || || ||||| || || | ||||| || || || ||| | ||||| || || || Sbjct 5139 -GGATCGATTCAGAACATCCCTCAGATTCCTGAGGATATGAAGGAATTGTATCGTACCGT 5197 Query 113162 TTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGA 113221 ||||| || | |||| | |||| | ||||| || || || | | | ||| || Sbjct 5198 GTGGGAGATTTCGCAGAAGAACATCATCAAAATGGCAGCCGACCGGGCACCGTACATCGA 5257 Query 113222 TCAAAGTCAAAGTATGAATCTATTCAT-GGAAAGTCCAACGATGTCCAAGCTCTCTTCTA 113280 |||||||||||| |||| | ||| | || | ||| | | |||||| || | Sbjct 5258 CCAAAGTCAAAGTTTGAACATTCACATCGCGGAGCCTAACTACG-GCAAGCTGACTAGCA 5316 Query 113281 TGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCGATCTAAGG 113340 |||| | ||| | |||||| || ||||| || ||||||||||| || ||| | ||| Sbjct 5317 TGCATTTTTACGGGTGGAAGGTCGGACTCAAGACCGGGATGTATTATCTTCGAACGAAGC 5376 Query 113341 CAAAGGCGCGCCCAATTCAGTTCA 113364 || || | | |||||||||| Sbjct 5377 CAGCAGCTCAAGCCATTCAGTTCA 5400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619810207860080