Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3604 163 3e-35 seq116056 154 2e-32 >seq3604 Length=7407 Score = 163 bits (180), Expect = 3e-35 Identities = 708/1100 (64%), Gaps = 25/1100 (2%) Strand=Plus/Minus Query 105558 TGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTC 105617 |||||||||| | | || || ||| | ||| ||||| ||||||||||||||||||| Sbjct 5400 TGAACTGAATGGCTTGAGCTGCTGGCTTCGTTCGAAGATAATACATCCCGGTCTTGAGTC 5341 Query 105618 CTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCC-ATG 105676 | |||||| |||| | |||||| || |||||| | | ||| | || | ||| Sbjct 5340 CGACCTTCCACCCGTAAAAATGCATGCTAGTCAGCTTGC-CGTAGTTAGGCTCCGCGATG 5282 Query 105677 AAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATATCAATG 105736 || |||| ||||||||| ||||| ||| | | | || | || ||||| | ||| Sbjct 5281 TGAATGTTCAAACTTTGACTTTGGTCGATGTACGGTGCCCGGTCGGCTGCCATTTTGATG 5222 Query 105737 ACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATA 105796 | | |||| | || |||||||| || || || | | ||| ||||| || || || Sbjct 5221 ATGTTCTTCTGCGAAATCTCCCACACGGTACGATACAATTCCTTCATATCCTCAGGAATC 5162 Query 105797 TCTGAGATATTTTGAATTGAACCCCCCGCCTTGACCATGAGATCC---TTCATATCCTTG 105853 | | ||| || ||||| || || ||| | || || | | || | || | | Sbjct 5161 TGAGGGATGTTCTGAATCGATCCGTTGT--TTG-CGATAAGCTGCAACTTTACGTCATCG 5105 Query 105854 GACCAAAGACCAATCTTCT-TGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTC 105912 ||| | ||| | |||| | | ||| ||| ||||||| || |||||| || || Sbjct 5104 TTCCAGATACCTCT-TTCTGTCAAATCCATGAGTAGATGCTGATTTACAATCTGGAATTC 5046 Query 105913 TCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATT 105972 || | || | | | || ||||| | ||||| || |||| | ||||||||| Sbjct 5045 GCCGGACAGCACACGACGCGTGTAAATGTTGCTGGTGTATGGCTCAATGGCTTCATTATT 4986 Query 105973 ACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAG 106032 ||||| ||||| || ||||| ||||||||||| || || | || ||| ||||| | Sbjct 4985 ACCCAGTATTTGAGCAGTGGATGCTGTTGGCATCGGCGCTAACAGCAGAGAATTACGTAC 4926 Query 106033 ACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGT--TGAGCTTGGTTTCA 106090 || | | ||||| || || | | |||| || | | || | || ||| Sbjct 4925 TCCGTGCTTTTTGATCTTCTCTTTCAAAGACGCCCAATCCCACAAATCAG-TGGGGGTCA 4867 Query 106091 CCTTCCCACATATCAAATTGAAGCACCCCTTGG--GACGTGGGAGAACCCTCAAATGTCT 106148 | |||||| |||| | || | |||||| ||| ||||| |||||| | ||| Sbjct 4866 CGC-CCCACAAATCATACTGTAATTGACCTTGGCTGACA--GGAGATCCCTCATAGCTCT 4810 Query 106149 CATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGG 106208 |||| | ||| |||| || | ||| || ||| || | ||| ||| |||| Sbjct 4809 CATACGGACCGCTCTCTTCCGCAAGTTCGCAAGACGCTGTCAAAGCCGCGAAATAAATGG 4750 Query 106209 TTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT--CTGAATCAAATGCGTAGCGGCA 106266 | || || || | | || | || | |||| || ||| ||||| | || | Sbjct 4749 TCTCGAATATTTCAACGTTGAGCTTCATGGCCTCGGGGCTG--TCAAACGGCATTCGCAA 4692 Query 106267 CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATT 106326 || ||||| | |||||||| ||||| || || | ||| || || | ||| | ||| || Sbjct 4691 CATGATAAAGGCGTCCGCGAGCCCTTGCACTCCAATACCGATTGGACGGTGCCTCATGTT 4632 Query 106327 AGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTT 106386 || || | ||| || || || | || ||||||||| | ||| ||||| Sbjct 4631 CGAATTCCTCGCTTGAGGTACAGGGTAGTAGTTGATGTCAATGATTTTGTTCAGATTCCG 4572 Query 106387 GGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT 106446 || || | ||| | || | | ||||| ||||| | | | ||| || || Sbjct 4571 TGTGACTACCTTGCACACGTCGTACAATTTTTTGAAATCATACTTTCC-GTCG-TTGGTT 4514 Query 106447 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 106506 ||||| || | ||||| || || | ||| || || ||| ||| ||||| || Sbjct 4513 -ACATAACGGGGCAATGCGATCGAAGCGAGATTACATACGGCCACCTCGTCCTTGCTGGT 4455 Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566 ||| |||| ||| || || || | || || || || ||||| |||| ||| || || || Sbjct 4454 GTATTCTACAATCTCAGTGCAGAGATTCGAGCTTTTGATCGTGCCCAGATTTTTCTGATT 4395 Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626 ||||||||||| || || |||||||||||||| ||||| || || || |||| || Sbjct 4394 TGATTTTTTGTTGCAAGCGTCTTTGTAGAGCATGTACGGCGTACCGGTTTCGATCTGCGA 4335 Query 106627 CTTGAGAATTGCCTTCCACA 106646 || || || || | ||||| Sbjct 4334 CTCGATGATGGCGTACCACA 4315 >seq116056 Length=8111 Score = 154 bits (170), Expect = 2e-32 Identities = 687/1074 (64%), Gaps = 27/1074 (3%) Strand=Plus/Minus Query 105583 CTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCAT 105642 ||| | ||| ||||| |||||||| ||||||||||| |||||| |||| | |||||| Sbjct 2941 CTTCGTTCGAAGATAATACATCCCCGTCTTGAGTCCGACCTTCCACCCGTAAAAATGCAT 2882 Query 105643 AGAAGAGAGCTTGGACATCGTTGGACTTTCC-ATGAAAAGATTCATACTTTGACTCTGGT 105701 | | |||| | | ||| | || | ||| || |||| ||||||||| |||| Sbjct 2881 GCTGGTCAACTTGC-CGTAGTTAGGCTCGGCGATGTGAATGTTCAAACTTTGACTTTGGT 2823 Query 105702 CAATGAAGCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGATTTCCCACA 105761 | ||| | | | || | || ||||| | |||| | |||| | || ||||||| Sbjct 2822 CGATGTACGGTGCCCGGTCGGCAGCCATTTTGATGATGTTCTTCTGCGAAATCTCCCACA 2763 Query 105762 CTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCC 105821 | || || || | ||||| ||||| || || || | | ||| |||||||| ||||| Sbjct 2762 CGGTACGATACAATTTCTTCATATCCTCAGGAATCTGAGGGATGTTTTGAATCGAACCGT 2703 Query 105822 CCGCCTTGACCATGAGATCC---TTCATATCCTTGGACCAAAGACCAATCTTCT-TGAGA 105877 || | ||||| | | || | ||| | | ||| | ||| | |||| | | | Sbjct 2702 TG---TTAGCGATGAGCTGCAACTTTACATCATCGTTCCAGATACCTCT-TTCTGTCAAA 2647 Query 105878 TCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAG 105937 || ||| | | ||| || |||||| || || || | || | || | || Sbjct 2646 TCCATGAGTAAACGCTGATTTACAATCTGGAATTCGCCGGACAGCACACGTCGCGTGTAA 2587 Query 105938 ATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCT 105997 ||||| | ||||| || |||| | |||||||||||||| ||||| || ||||| ||| Sbjct 2586 ATGTTGCTAGTGTATGGCTCAATGGCTTCATTATTACCCAGTATTTGAGCAGTGGATGCT 2527 Query 105998 GTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTG 106057 |||||||| || || | || ||| || || | || | | ||||| || || Sbjct 2526 GTTGGCATCGGCGCTAACAGCAGAGAATTGCGTACTCCGTGCTTTTTGATCTTCTCTTTC 2467 Query 106058 AGAACATCCCAGTCGTAGT--TGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCA 106115 | | |||| || | | || | || |||| |||||| |||| | || | Sbjct 2466 AAAGACGCCCAATCCCACAAATCAG-TGGGGGTCACGC-CCCACAAATCATACTGTAATT 2409 Query 106116 CCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT 106175 |||||| | ||||| |||||| | ||||||| | ||| |||| || | || Sbjct 2408 GACCTTGGCTGATAGGAGATCCCTCATAGCTCTCATACGGACCGCTCTCTTCCGCAAGTT 2349 Query 106176 CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCT 106235 | || ||| || | ||| ||| ||||| || || || | | || | || | Sbjct 2348 CGCAAGACGCTGTCAAAGCCGCGAAATAAATGGTCTCGAATATTTCAACGTTGAGCTTCA 2289 Query 106236 TGGCTTCAT--CTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTG 106293 |||| || ||| || |||| || ||| ||||| | ||||| || ||||| Sbjct 2288 TGGCCTCGGGGCTG--TCGAATGGCATTCGCAACATGATAAAGGCGTCCGCCAGTCCTTG 2231 Query 106294 AACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGC---AGTCTCAACGGG 106350 || || | ||| || || | ||| | ||| || || || | ||| || | ||||| Sbjct 2230 CACTCCAATACCGATCGGACGGTGCCTCATGTTCGAATTCCTCGCTTGAGGC---ACGGG 2174 Query 106351 ATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG 106410 || | || ||||||||| | ||| ||||| || || | ||| | || | Sbjct 2173 GTAGTAGTTGATGTCAATGATTTTGTTCAGATTCCGTGTGACGACCTTGCACACGTCGTA 2114 Query 106411 AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGA 106470 | ||||| ||||| | | | | || | | || || || | ||||| || Sbjct 2113 CAATTTTTTGAAATCATACTTTCCA---TCGTTGGTTACGTATCGGGGCAATGCGATCGA 2057 Query 106471 TGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAA 106530 || | ||| || || ||| ||| ||||| ||||| |||| ||| || || || | Sbjct 2056 AGCGAGATTACACACGGCCACCTCGTCCTTGCTGGTGTATTCTACAATCTCAGTGCAGAG 1997 Query 106531 GTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTT 106590 || || || || ||||| |||| || ||||| || ||||||||||| || || || Sbjct 1996 ATTTGAGCTTTTGATCGTGCCCAGATCTTTTTGATTTGATTTTTTGTTGCAAGCGTCTTT 1937 Query 106591 GTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644 |||||||||||| ||||| || || || |||| |||| || || || | ||| Sbjct 1936 GTAGAGCATGTACGGCGTACCGGTTTCGATCTGCGACTCGATGATGGCGTACCA 1883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589094803708360