Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1613 206 6e-48 seq114234 178 3e-39 seq114236 165 2e-35 seq105181 93.3 9e-14 seq3604 93.3 9e-14 seq93596 91.5 3e-13 >seq1613 Length=19885 Score = 206 bits (228), Expect = 6e-48 Identities = 171/209 (82%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| |||||||| || ||||||||||| ||||| ||| ||| || | |||||||| Sbjct 819 ACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGCTAAGCGTACGGCCATCTTCC 760 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || || ||||||||||||||||| |||||||| Sbjct 759 AGCTGCTTGCCGGCGAAGATTAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGG 700 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||||| || ||||||||||| ||| || ||||| || | ||||||| Sbjct 699 ATCTTCTGCTTGACGTTATCGATGGTGTCCGAGGCTTCGACCTCAAGCGTGATCGTCTTT 640 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||||||||| | |||||| Sbjct 639 CCTGTGAGGGTTTTTACGAAGATTTGCAT 611 Score = 172 bits (190), Expect = 1e-37 Identities = 172/223 (77%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||||| || | ||| | ||| || |||||||| |||||||| || || || Sbjct 604 TCTCAGTCTCAGGACCAAGTGCAAAGTAGATTCTTTTTGGATATTGTAGTCACTGAGGGT 545 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | ||||| || | |||||||| ||||||||||| ||||| || || |||||||| || Sbjct 544 ACGGCCATCCTCCAATTGCTTACCAGCGAAGATAAGACGTTGCTGATCAGGAGGAATCCC 485 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| || |||||||| |||||||| || || |||||||| ||| || |||||||| Sbjct 484 TTCTTTATCCTGAATTTTCTGCTTGACATTATCGATGGTGTCGGAAGCCTCGACTTCAAG 425 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||| || ||||| |||| ||| || ||||| | |||||| Sbjct 424 AGTAATGGTTTTTCCGGTCAGAGTCTTCACGAAAATCTGCATT 382 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| | |||||| || || || || ||||| ||| || || | ||||| || Sbjct 136 AACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTC 77 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 | ||||| || |||||||| || || || || || |||||||||||||| ||||| || Sbjct 76 CAATTGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTG 17 Query 195051 AATTTTTTGCTTGAC 195065 ||||| ||||| || Sbjct 16 GATTTTCTGCTTCAC 2 >seq114234 Length=910 Score = 178 bits (196), Expect = 3e-39 Identities = 173/223 (78%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | || | ||| | ||| ||||||||||| || ||||| ||| ||||| Sbjct 749 TCTCAGTCTGAGGACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTGAGAGT 690 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | ||||| || || ||||| || || ||||| || ||||||||||| Sbjct 689 GCGGCCATCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGTTGATCGGGAGGAATGCC 630 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| |||||||| || |||||||| || ||||||||||| ||| || || || | Sbjct 629 TTCTTTATCTTGAATCTTCTGCTTGACATTATCAATGGTGTCAGAAGCCTCGACCTCCAA 570 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||| || || |||||||||||||| ||||| | ||||||| Sbjct 569 AGTAATGGTTTTGCCTGTCAAAGTTTTCACGAAGATTTGCATT 527 Score = 176 bits (194), Expect = 1e-38 Identities = 172/223 (77%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | || | ||| | ||| ||||||||||| || ||||| ||| ||||| Sbjct 293 TCTCANTCTNAGNACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTGAGAGT 234 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || ||||| | ||||| || |||||||| || || ||||| || ||||||||||| Sbjct 233 GCGGCCGTCTTCCAATTGCTTGCCGGCGAAGATGAGACGCTGTTGATCGGGAGGAATGCC 174 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| |||||||| || |||||||| || ||||||||||| ||| || || || | Sbjct 173 TTCTTTATCTTGAATCTTCTGCTTGACATTATCAATGGTGTCAGAAGCCTCGACCTCCAA 114 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||| || || |||||||||||||| ||||| | ||||||| Sbjct 113 AGTAATGGTTTTGCCTGTCAAAGTTTTGACGAAGATTTGCATT 71 Score = 147 bits (162), Expect = 5e-30 Identities = 164/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||||| || | ||| | ||| || || || || || ||||| ||| || || Sbjct 521 TCTCAGTCTCAGGACCAAGTGCAAAGTNGANTCNTTNTGGATGTTGTAGTCGCTGAGNGT 462 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || || || | ||||| || || ||||| || || || || || ||||||||||| Sbjct 461 NCGGCCGTCNTCCAATTGCTTGCCNGCNAAGATGAGACGCTGCTGATCGGGAGGAATGCC 402 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||| || |||| ||||| || || || || ||||| ||| || ||||| || Sbjct 401 TTCTTTGTCCTGGNTTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAG 342 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| || || || |||||||| || ||||| | ||||||| Sbjct 341 GGTAATAGTTTTACCGGTCAAAGTNTTGACGAAGATTTGCATT 299 Score = 116 bits (128), Expect = 8e-21 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 ||||| || |||||||| || || || || || ||||||||||| || ||||| || ||| Sbjct 901 TGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCCTGGATT 842 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 || ||||| || || || || ||||| ||| || ||||| ||||||| || || || Sbjct 841 TTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTACCG 782 Query 195115 GTCAAAGTTTTTACGAACACTTGCATT 195141 |||||||| || ||||| | ||||||| Sbjct 781 GTCAAAGTCTTGACGAAGATTTGCATT 755 >seq114236 Length=889 Score = 165 bits (182), Expect = 2e-35 Identities = 170/223 (76%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||| ||| | ||| | ||| ||||||||||| || ||||| ||| ||||| Sbjct 369 TCTCAATCTCAGAACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTNAGAGT 428 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || ||||| | ||||| || || ||||| || || || || || ||||||||||| Sbjct 429 GCGGCCGTCTTCCAATTGCTTGCCGGCAAAGATGAGACGCTGCTGATCGGGAGGAATGCC 488 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| || ||||| ||||| || || || || ||||| ||| || ||||| || Sbjct 489 TTCCTTGTCCTGGATTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAG 548 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| || || ||||||||||| || ||||| | ||||||| Sbjct 549 GGTAATAGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCATT 591 Score = 141 bits (156), Expect = 2e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | || | ||| | ||| || || || || || ||||| ||| || || Sbjct 141 TCTCAGTCTGAGGACCAAGTGCAAAGTCGATTCCTTCTGGATGTTGTAGTCGCTNAGGGT 200 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || ||||| | ||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct 201 GCGGCCGTCTTCCAACTGCTTACCGGCGAAGATAAGACGTTGTTGATCTGGAGGAATGCC 260 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| |||||||| || || || || || |||||||| ||| || || || | Sbjct 261 TTCTTTATCTTGAATCTTCGATTTTACATTTTCGATGGTGTCAGAAGCCTCGACCTCCAN 320 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || |||||||| || || || | |||||| Sbjct 321 AGTGATAGTTTTACCGGTCAAAGTCTTGACNAAGATTTGCAT 362 Score = 140 bits (154), Expect = 7e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | || | ||| | ||| || || || || || ||||| ||| || || Sbjct 597 TCTCAGTCTGAGGACCAAGTGCAAAGTCGATTCCTTCTGGATGTTGTAGTCGCTTAGGGT 656 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || ||||| | ||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct 657 GCGGCCGTCTTCCAACTGCTTACCGGCGAAGATAAGACGTTGTTGATCTGGAGGAATGCC 716 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| |||||||| || || || || || |||||||| ||| || || || | Sbjct 717 TTCTTTATCTTGAATCTTCGATTTTACATTTTCGATGGTGTCAGAAGCCTCGACCTCCAA 776 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || |||||||| || || || | |||||| Sbjct 777 AGTGATAGTTTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 818 Score = 109 bits (120), Expect = 1e-18 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 195007 AAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACG 195066 ||||| || || || || || |||||||||||||| ||||| || ||||| ||||| || Sbjct 1 AAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTCACA 60 Query 195067 TTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTT 195126 || || || ||||| ||| || ||||| ||||||| || || || |||||||| || Sbjct 61 TTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTACCGGTCAAAGTCTTG 120 Query 195127 ACGAACACTTGCATT 195141 ||||| | ||||||| Sbjct 121 ACGAAGATTTGCATT 135 >seq105181 Length=5199 Score = 93.3 bits (102), Expect = 9e-14 Identities = 160/228 (70%), Gaps = 6/228 (3%) Strand=Plus/Minus Query 125527 CCAAAGAAACACGGCAGGGGAGGACAATCTGCTTTGCGTTTTGAGAGACTTCGAAAAGAA 125586 || || ||||||||||||||||||||||| ||| | ||||||| | ||| ||| ||| Sbjct 2741 CCTAAAAAACACGGCAGGGGAGGACAATCGGCTCTTCGTTTTGCCCGTCTTAGAATGGAA 2682 Query 125587 AAGAGACACAACTATTTGAGGAAAGTCGCAGAGAATGCAACTCAATGTTTTTTGCAAGAC 125646 ||| | ||||| ||| | | |||||||| |||| || | | ||| || || | Sbjct 2681 AAGCGTCACAATTATGTACGCAAAGTCGCCGAGACAGC--CGTGACGTTGTTCATAACA- 2625 Query 125647 AACAA--GTGC-AACGTCATTGGGATTGTCATTGCTGGATCGGCAGAGTTCAAAACAAAG 125703 ||| | || | || || | ||| |||| | ||||| || || || ||||||||| || Sbjct 2624 AACGACCGTCCGAATGTAACTGGACTTGTACTAGCTGGGTCTGCTGATTTCAAAACAGAG 2565 Query 125704 CTTCTGGAATCTGACCTTTTCGACCAAAGACTTCGAACAAAAGTCTTG 125751 | | ||||| | ||||| |||||||| | | | ||||| ||| Sbjct 2564 TTGAGCCAGTCTGATATGTTCGATCAAAGACTCCAAGCTAAAGTGTTG 2517 >seq3604 Length=7407 Score = 93.3 bits (102), Expect = 9e-14 Identities = 183/265 (69%), Gaps = 8/265 (3%) Strand=Plus/Plus Query 160514 TGGCACGTTGACATCTTTGACTTTGTCGATGCGAAAAAGC---CCGGAGGTGATGACCTG 160570 ||||| | || ||||||||||| | || ||||||||| |||| ||||| | Sbjct 4059 TGGCATGCGGATGTCTTTGACTTTTTAGACGCGAAAAAGAACACCGGCAAAGATGAG-TC 4117 Query 160571 ATGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGT- 160629 | ||||| | || |||||||||| || |||| | ||| | || ||||| | || Sbjct 4118 A--AGAGCTCGGGACCTTTTCTACGCGATGTGGATACCGGATTTGTTTATGAAACGGGTT 4175 Query 160630 GAAAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGT 160689 ||||| |||||| |||||| || || || |||||||||||| ||| | | || || Sbjct 4176 GAAAG-CAATGGAGATTGGTCGCTATTTTGCCCCAATGAAGCGATTGGTTTGGTCGACGT 4234 Query 160690 TTATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAA 160749 ||||||| || || || | ||||| || | || ||||||| || ||||| | || Sbjct 4235 TTATGGTGATGAATTTGATAAGCTTTACGAGAAGTATGAAAAAGCAGGGAGAGCGAGGAA 4294 Query 160750 GGTCGTGAAGGCCCAAGAACTGTGG 160774 | | || || ||| |||||||| Sbjct 4295 GACAATCAAAGCGCAAAAACTGTGG 4319 >seq93596 Length=6710 Score = 91.5 bits (100), Expect = 3e-13 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 125523 CCTTCCAAAGAAACACGGCAGGGGAGGACAATCTGCTTTGCGTTTTGAGAGACTTCGAAA 125582 ||| || || ||||| ||||||||||||||||| ||| | ||||||| | ||| ||| Sbjct 2812 CCTGCCTAAAAAACATGGCAGGGGAGGACAATCGGCTCTTCGTTTTGCCCGTCTTAGAAT 2871 Query 125583 AGAAAAGAGACACAACTATTTGAGGAAAGTCGCAGAGAATGCAACTCAATGTTTTTTGCA 125642 |||||| | ||||| ||| | | |||||||| |||| || | | ||| || | Sbjct 2872 GGAAAAGCGTCACAATTATGTACGCAAAGTCGCCGAGACAGC--CGTGACGTTGTTCATA 2929 Query 125643 AGACAACAA--GTGC-AACGTCATTGGGATTGTCATTGCTGGATCGGCAGAGTTCAAAAC 125699 | | ||| | || | || || | ||| |||| | ||||| || || || |||||||| Sbjct 2930 ACA-AACGACCGTCCGAATGTAACTGGACTTGTACTAGCTGGGTCTGCTGATTTCAAAAC 2988 Query 125700 AAAGCTTCTGGAATCTGACCTTTTCGACCAAAGACTTCGAACAAAAGTCTTG 125751 | || | | ||||| | ||||| |||||||| | | | ||||| ||| Sbjct 2989 AGAGTTGAGCCAGTCTGATATGTTCGATCAAAGACTCCAAGCTAAAGTGTTG 3040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1107773796122613