Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3604 138 2e-27 >seq3604 Length=7407 Score = 138 bits (152), Expect = 2e-27 Identities = 1000/1593 (63%), Gaps = 62/1593 (4%) Strand=Plus/Minus Query 212706 TGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAG 212765 ||||| ||||| ||| | || |||| ||| || ||||| | ||||| | |||| || Sbjct 5266 TGACTTTGGTCGATGTACGGTGCCCGGTCGGCTGCCATTTTGATGATGTTCTTCTGCGAA 5207 Query 212766 AGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCG-GGGATGTTCTG 212824 | |||||||||||| | | ||| || | ||||| || || | | ||||||||||| Sbjct 5206 ATCTCCCACACGGTACGATACAATTCCTTCATATCCTCAGG-AATCTGAGGGATGTTCTG 5148 Query 212825 CACAGACCCCCTGTGTATGGTCAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGT 212884 | || || ||| | | | ||||||| | ||| |||||||||| || || | Sbjct 5147 AATCGATCCGTTGTTTGCGATAAGCTGCAACTTTACGTCATCGTTCCAGATACCTCT-TT 5089 Query 212885 CT-CCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCC 212943 || || | ||| || || | || || |||||||| || || || ||||| | | Sbjct 5088 CTGTCAAATCCATGAGTAGATGCTGATTTACAATCTGGAATTCGCCGGACAGCACACGAC 5029 Query 212944 TCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAG 213003 | ||||| ||| ||||| ||||| ||| || || || ||||| || || |||| Sbjct 5028 GCGTGTAAATGTTGCTGGTGTATGGCTCAATGGCTTCATTATTACCCAGTATTTGAGCAG 4969 Query 213004 TGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGA 213063 || ||||| ||||| || || | ||| ||| || | |||||||||| ||| Sbjct 4968 TGGATGCTGTTGGCATCGGCGCTAACAGCAGAGAATTACGTACTCCGTGCTTTTTGAT-C 4910 Query 213064 GGCGC---CGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCC 213120 | | | ||| ||||| |||| ||| || | ||||| || Sbjct 4909 TTCTCTTTCAAAG--ACGCCCAATCCC---------ACAAATCAGTGGGGGTCACGCCCC 4861 Query 213121 ACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGC 213180 ||| ||| |||| || |||| ||| || || |||| || || || | Sbjct 4860 ACAAATCATACTGTAATTGACCTTGGCTGACAGGAGATCCCTCATAGCTCTCATACGGAC 4801 Query 213181 CATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATA 213240 | ||| | || || ||||| ||||| || || ||| | || ||||| || |||| Sbjct 4800 CGCTCTCTTCCGCAAGTTCGCAAGACGCTGTCAAAGCCGCGAAATAAATGGTCTCGAATA 4741 Query 213241 TCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGT-GAAGGGCAT---CATCATGCGTTGG 213296 | || |||||||||| ||||||| |||| || || ||||| || |||| Sbjct 4740 TTTCAACGTTGAGCTTCATGGCCTC-GGGGCTGTCAAACGGCATTCGCAACATG---ATA 4685 Query 213297 AACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG 213356 || | || || ||||| || || || || ||||| || | ||| |||| ||| || || Sbjct 4684 AAGGCGTCCGCGAGCCCTTGCACTCCAATACCGATTGGACGGTGCCTCATGTTCGAATT- 4626 Query 213357 GAGCACTC-CTCCAAG----GGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGG 213411 ||| || | | ||||| ||||| ||| ||||| ||||| || || || | Sbjct 4625 ----CCTCGCTTGAGGTACAGGGTAGTAGTTGATGTCAATGATTTTGTTCAGATTCCGTG 4570 Query 213412 TGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCT--- 213468 || | || ||| ||| | |||| | ||||| | || ||||| | Sbjct 4569 TGACTACCTTG--CACA----CGTCGTACAATTTTTTGAAATCATACTTTCCGTCGTTGG 4516 Query 213469 GCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTG 213528 ||| | |||| ||||| || || || || ||||||||||| | | | Sbjct 4515 TTACATAACGGGGCAATGCGATCGAAGCGAGATTACATACGGCCACCTCGTCCTTGCTGG 4456 Query 213529 TGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGT 213588 |||| || | ||||| ||||| || || || | ||| |||||||| || | || | Sbjct 4455 TGTATTCTACAATCTCAGTGCAGAGATTCGAGCTTTTGATCGTGCCCAGATTTTTCTGAT 4396 Query 213589 TTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGG 213648 |||| ||| |||| || || |||||||||||||| || | ||||| || | ||| | Sbjct 4395 TTGATTTTTTGTTGCAAGCGTCTTTGTAGAGCATGTACGGCGTACCGGTTTCGATCTGCG 4336 Query 213649 ACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCG 213708 || | | || | ||| || | || |||| | ||| | |||| || Sbjct 4335 ACTCGATGATGGCGTACCACAGTTTTTGCGCTTTGATTGTCTTCCTCGC-TCTCCCTGCT 4277 Query 213709 TAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCC-- 213766 | || |||| ||||| |||| | ||||| | || | || | ||| || Sbjct 4276 T--TTTCATACTTCTCGTAAAGCTTATCAAATTCATCACCATAAACGTCGACCAAACCAA 4219 Query 213767 -CGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGA 213825 || | || ||| || | || ||| || || | | || | | ||| | Sbjct 4218 TCG--CTTCAT-TGGGGCAAAATAGCGACCAATCTCCATTGCTTTCAACCCGTTTCATAA 4162 Query 213826 ACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAG 213885 ||| ||||| | ||||| |||| ||| ||||||| | || ||| || || | Sbjct 4161 ACAAATCCGGTATCCACATCGCGTAGAAAAGGTCCCGAGCTCTTGACTCATCTTTGCCGG 4102 Query 213886 AGT--TTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGAT 213943 || |||| ||| |||| ||||||||||| ||||| |||||||| || | ||| | Sbjct 4101 TGTTCTTTTTCGC--GTCTAAAAAGTCAAAGACATCCGCATGCCACGGTTCGAGGTACAC 4044 Query 213944 GGCAAAGGCGCCCGGCC---TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAA 214000 ||||| || || |||| | || ||||| ||||| || | ||| ||||| | Sbjct 4043 CGCAAATGCACCTGGCCTTTTATTACCGCCTTGGTCTACGTAACGTGCCGTGTTGTTGTA 3984 Query 214001 GATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCC 214060 | ||||| | || | || ||||| || | |||||| || || || ||||| ||| Sbjct 3983 AACACGCAGCATAGGCAAGAGACCGTTCGAGTTTCCGTTAGTGCCTGCGATATAACTGCC 3924 Query 214061 GGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGC 214120 | || || | |||| ||| | || || || || || |||||||| | || Sbjct 3923 GCTAGCTCTAATGTTGGAAATGCTCAATCCAATCCCGCCAGCAGTTTTGGAGATAAGAGC 3864 Query 214121 GCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAA 214180 ||| || | | || || |||||| | |||||||||||| | || || || Sbjct 3863 GCACTGCTTTAAGGTTTCGTAGATGCCATCGATGCTGTCATCTTGCATCGCCAATAAAAA 3804 Query 214181 GCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGAT 214240 ||| || || | || || || | ||||| |||||| || ||||| |||||| | Sbjct 3803 GCAACTGGATAATTGAGGTCTATTGGTGCCAGCGTTGAATAGAGTGGGTGACGCATGGGT 3744 Query 214241 CATAAACTTGTTAGAGAGGAGCCTGTAGGTCTC 214273 | |||| | ||| | || ||||||| || Sbjct 3743 GAACCACTTCTCAGACATAAGATTGTAGGTTTC 3711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930133882261760