Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq116056 165 1e-35 >seq116056 Length=8111 Score = 165 bits (182), Expect = 1e-35 Identities = 1127/1784 (63%), Gaps = 60/1784 (3%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| || ||||| | ||| | ||| | ||||||||||| || ||| | || ||| | Sbjct 1213 CCCGCAACACATGCTAATGAGAGTCTCCATCGGCATCCATGGCGAAAATATCGATCGCGC 1272 Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | || || ||| | ||||| | | || ||||| || || |||| || || | Sbjct 1273 TATTGAAACCTACAATCTTATGTCTGAGAAGTG-GTTCACCCATGCGTCACCCACTCTAT 1331 Query 75330 TCAATGCTGGTACACCAA--GACCGCAGATGTCCAGTTGCTTCCTTATCGCCAA--CAAG 75385 |||| ||||| |||||| |||| || | ||||||||||| |||| | | | |||| Sbjct 1332 TCAACGCTGG--CACCAATAGACCTCAATTATCCAGTTGCTTT-TTATTGGCGATGCAAG 1388 Query 75386 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 75445 | ||| ||| | || ||||| | ||| | | | |||| || | ||||| || Sbjct 1389 -ATGACAGCATCGATGGCATCTACGAAACCTTAAAGCAGTGCGCTCTTATCTCCAAAACT 1447 Query 75446 GCTGGGGGTATTGGGATGCACAT--CCATGATGTGAG--AGC--CAATAAATCTCGTATT 75499 ||||| || ||||| || ||| ||| || ||| ||| || | | | ||| | Sbjct 1448 GCTGGCGGGATTGGATTGAGCATTTCCAACATTAGAGCTAGCGGCAGTTA-TATCGCA-- 1504 Query 75500 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 75559 || || || || | || | ||| | | || ||||| || || | ||| |||| Sbjct 1505 ---GGCACCAACGGAAACTCCAACGGTCTCTTGCCCATGCTGCGTGTTTATAATAACACA 1561 Query 75560 GCGCGCTATGTAAATCAAGCGGGGCGTCGCAAGG---GGTCCAT-CGCGGTCTACTTGGA 75615 || || || ||| | |||| || | |||| ||| ||| |||||| ||| | || Sbjct 1562 GCACGTTACGTAGACCAAGGCGGTAATAA-AAGGCCAGGTGCATTCGCGGTGTACCTCGA 1620 Query 75616 ACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCA--ACCAAGGTGACGAA 75673 || |||||||| ||| || | || || || || ||| | || || | || Sbjct 1621 GCCGTGGCATGCGGATGTCTTTGACTT--TTTAGACGCGAAAAAGAACACGGGCAAAGAT 1678 Query 75674 GAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGG 75733 || | || | || || || | | ||||||| || || | || ||||| ||| Sbjct 1679 GAATCAAGGGCACGGGACCTTTTCTACGCGATGTGGATACCGGATTTGTTTATGAAACGG 1738 Query 75734 GTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC 75793 ||||| ||| | ||||| || || || || | | || |||| | |||| Sbjct 1739 GTTGAAAGCAATGGGGATTGGTCGCTATTTTGCCCCAATGAAGCGATAGGTTTGGTCGAC 1798 Query 75794 GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAAT 75853 | ||||| |||||||| |||||| ||||||||| | | || ||||| | Sbjct 1799 GTATATGGTGATGAGTTTGATAAGCTCTACGAGAAGTATGAAAAAGCAGGGAGAGCGAGG 1858 Query 75854 GCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913 ||| | ||| | | ||| | || || || | || |||| || || || Sbjct 1859 AAGACAATCAAAGCGCAAAAACTATGGTACGCCATCATCGAGTCGCAGATCGAAACCGGT 1918 Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973 || || || ||||| ||||| || ||||| ||||| || || ||||| || |||| Sbjct 1919 ACGCCGTACATGCTCTACAAAGACGCTTGCAACAAAAAATCAAATCAAAAAGATCTGGGC 1978 Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033 || ||||| ||||||||||| ||||| || ||| |||| ||||| ||||| ||| | Sbjct 1979 ACGATCAAAAGCTCAAATCTCTGCACTGAGATTGTAGAATACACCAGCAAGGACGAGGTG 2038 Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACT 76093 || || || ||| | || || ||||| | || || || | | || | | | Sbjct 2039 GCCGTGTGTAATCTCGCTTCGATCGCATTGCCCCGATACGTAACCAACGA---TGGAAAG 2095 Query 76094 TTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTC 76153 | ||||| ||||| | | || | ||| | || || ||||| ||| | || Sbjct 2096 TATGATTTCAAAAAATTGTACGACGTGTGCAAGGTCGTCACACGGAATCTGAACAAAATC 2155 Query 76154 ATTGACAGAAATTTTTATCCCGTTGAGACT---GCGCGAAAGTCTAATATGCGACACAGA 76210 ||||||| || | || ||||| | || ||| | || || || ||| | ||| | Sbjct 2156 ATTGACATCAACTACTACCCCGT---GCCTCAAGCGAGGAATTCGAACATGAGGCACCGT 2212 Query 76211 CCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTT 76270 || || ||| | || || ||||| || ||||| | ||||| ||| || |||| Sbjct 2213 CCGATCGGTATTGGAGTGCAAGGACTGGCGGACGCCTTTATCATGTTGCGAATGCCATTC 2272 Query 76271 GATTCAG--ATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 || ||| || |||| | || | || | | || || || ||||| ||| ||| Sbjct 2273 GA--CAGCCCCGAGGCCATGAAGCTCAACGTTGAAATATTCGAGACCATTTATTTCGCGG 2330 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 | || ||| ||| ||| | || |||| ||| | ||||||| | |||||| | Sbjct 2331 CTTTGACAGCGTCTTGCGAACTTGCGGAAGAGAGCGGTCCGTATGAGAGCTATGAGGGAT 2390 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCA--A 76446 |||| |||||| | |||| |||| |||||| |||| || | || | Sbjct 2391 CTCCTATCAGCCAAGGTCAATTACAGTATGATTTGTGGG-GCGTGACCCCCA-CTGATTT 2448 Query 76447 CTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 76506 | || |||| | | || || ||||| || | || | || || ||| | Sbjct 2449 GTGGGATTGGGCGTCTTTGAAAGAGAAGATCAAAAAGCACGGAGTACGCAATTCTCTGCT 2508 Query 76507 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 76566 | | || || ||||||||||| ||||| || ||||| |||||||||||||| | |||| Sbjct 2509 GTTAGCGCCGATGCCAACAGCATCCACTGCTCAAATACTGGGTAATAATGAAGCCATTGA 2568 Query 76567 ACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAA 76626 |||||||| | ||||| ||| | || | || | || || || ||||| || Sbjct 2569 GCCATACACTAGCAACATTTACACGCGACGTGTGCTGTCCGGCGAATTCCAGATTGTAAA 2628 Query 76627 CAAGCACCTCGTCAATGACCTCA-AGAAGATTGGTCTCTGGTCCAAGGATATGAA---GG 76682 ||| | ||| || | | |||| | ||| ||||| | | ||| | || | Sbjct 2629 TCAGCGTTTACTCATGGATTTGACAGAA-AGAGGTATCTGGAACGATGATGTAAAGTTGC 2687 Query 76683 ATCTCAT-GGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATC 76741 | ||||| | | | | | ||||| |||||||| ||| | | || || || ||||| Sbjct 2688 AGCTCATCGCTAACAAC----GGTTCGATTCAAAACATCCCTCAGATTCCTGAGGATATG 2743 Query 76742 AAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCA 76801 ||||| | || || || |||||||| || | ||| | |||| | ||||| || Sbjct 2744 AAGAAATTGTATCGTACCGTGTGGGAGATTTCGCAGAAGAACATCATCAAAATGGCTGCC 2803 Query 76802 GATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCAT-GGAAAGTCCAAC 76860 || || | | | ||| || |||||||||||| |||| | ||| | || | ||| Sbjct 2804 GACCGGGCACCGTACATCGACCAAAGTCAAAGTTTGAACATTCACATCGCCGAGCCTAAC 2863 Query 76861 GATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAAT 76920 | | |||| | | |||||| | |||| |||||| || ||||| || || || Sbjct 2864 TACG-GCAAGTTGACCAGCATGCATTTTTACGGGTGGAAGGTCGGACTCAAGACGGGGAT 2922 Query 76921 GTACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 ||| ||||| ||| | ||| || || | | | || ||||||| Sbjct 2923 GTATTATCTTCGAACGAAGCCGGCGGCTCAAGCCATCCAGTTCA 2966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595673709060320