Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq114236 129 5e-25 seq114234 120 2e-22 seq1613 100 2e-16 >seq114236 Length=889 Score = 129 bits (142), Expect = 5e-25 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| || ||||| ||||| ||||||||||| |||||| ||||| |||||| Sbjct 591 AATGCAAATCTTCGTCAAGACTTTGACAGGCAAAACTATTACCCTCGAAGTCGAGGCTTC 532 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || ||| ||| | || || || || || || || |||||| | || ||||| Sbjct 531 AGACACTATCGATAATGTGAAGCAGAAAATCCAGGACAAGGAAGGCATTCCTCCCGATCA 472 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | || || | ||| || || || |||| |||| | || | |||||||| Sbjct 471 GCAGCGTCTCATCTTTGCCGGCAAGCAATTGGAAGACGGCCGCACTCTNAGCGACTACAA 412 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||| ||||| |||||||| |||||| |||| |||||||| |||| || Sbjct 411 CATCCAAAAAGAGTCTACTTTGCACTTGGTTCTGAGATTGAGAGGAGG 364 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| |||||||| ||||| || || ||||| || || | || |||||| Sbjct 818 ATGCAAATCTTTGTCAAGACTTTGACCGGTAAAACTATCACTTTGGAGGTCGAGGCTTCT 759 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | |||||| |||||| |||||||||||| | || ||||| Sbjct 758 GACACCATCGAAAATGTAAAATCGAAGATTCAAGATAAAGAAGGCATTCCTCCAGATCAA 699 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | ||||| | || ||||| ||| |||| |||| | || | ||||||||| Sbjct 698 CAACGTCTTATCTTCGCCGGTAAGCAGTTGGAAGACGGCCGCACCCTAAGCGACTACAAC 639 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 || || ||||| || || |||||| |||| | ||| || |||| |||| Sbjct 638 ATCCAGAAGGAATCGACTTTGCACTTGGTCCTCAGACTGAGAGGTGGAA 590 Score = 100 bits (110), Expect = 2e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || ||||| ||||| || || ||||| || || | || |||||| Sbjct 362 ATGCAAATCTTNGTCAAGACTTTGACCGGTAAAACTATCACTNTGGAGGTCGAGGCTTCT 303 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | |||||| |||||| |||||||||||| | || ||||| Sbjct 302 GACACCATCGAAAATGTAAAATCGAAGATTCAAGATAAAGAAGGCATTCCTCCAGATCAA 243 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | ||||| | || ||||| ||| |||| |||| | || | ||||||||| Sbjct 242 CAACGTCTTATCTTCGCCGGTAAGCAGTTGGAAGACGGCCGCACCCTNAGCGACTACAAC 183 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 || || ||||| || || |||||| |||| | ||| || |||| |||| Sbjct 182 ATCCAGAAGGAATCGACTTTGCACTTGGTCCTCAGACTGAGAGGTGGAA 134 >seq114234 Length=910 Score = 120 bits (132), Expect = 2e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| || ||||||||||| ||||||||||||||||| | || |||||| Sbjct 71 AATGCAAATCTTCGTCAAAACTTTGACAGGCAAAACCATTACTTTGGAGGTCGAGGCTTC 130 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | || || || |||||| |||||||||||| | || ||||| Sbjct 131 TGACACCATTGATAATGTCAAGCAGAAGATTCAAGATAAAGAAGGCATTCCTCCCGATCA 190 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| | || || | || || || || |||| |||| | || | |||||||| Sbjct 191 ACAGCGTCTCATCTTCGCCGGCAAGCAATTGGAAGACGGCCGCACTCTCAGCGACTACAA 250 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||| ||||| |||||||| |||||| |||| | ||| || |||| |||| Sbjct 251 CATCCAAAAAGAGTCTACTTTGCACTTGGTNCTNAGANTGAGAGGTGGAA 300 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| || || |||||||| ||||||||||||||||| | || |||||| Sbjct 527 AATGCAAATCTTCGTGAAAACTTTGACAGGCAAAACCATTACTTTGGAGGTCGAGGCTTC 586 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | || || || |||||| |||||||||||| | || ||||| Sbjct 587 TGACACCATTGATAATGTCAAGCAGAAGATTCAAGATAAAGAAGGCATTCCTCCCGATCA 646 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| | || || | ||| || || || |||| || | | || | |||||||| Sbjct 647 ACAGCGTCTGATCTTTGCCGGCAAGCAATTGGAAGATGGCCGCACTCTCAGCGACTACAA 706 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||| ||||| |||||||| |||||| |||| | ||| || |||| |||| Sbjct 707 CATCCAAAAAGAGTCTACTTTGCACTTGGTCCTCAGACTGAGAGGTGGAA 756 Score = 109 bits (120), Expect = 4e-19 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| || ||||| ||||| || || ||||| |||||| ||||| |||||| Sbjct 299 AATGCAAATCTTCGTCAANACTTTGACCGGTAAAACTATTACCCTCGAAGTCGAGGCTTC 358 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || ||| ||| | || || || || | || ||||||||| | || ||||| Sbjct 359 AGACACTATCGATAATGTGAAGCAGAAAANCCAGGACAAAGAAGGCATTCCTCCCGATCA 418 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | || || | || || || || |||| |||| | || | |||||||| Sbjct 419 GCAGCGTCTCATCTTNGCNGGCAAGCAATTGGANGACGGCCGNACNCTCAGCGACTACAA 478 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||| || || || || || |||||| |||| ||||| || |||| |||| Sbjct 479 CATCCANAANGANTCNACTTTGCACTTGGTCCTGAGACTGAGAGGTGGAA 528 >seq1613 Length=19885 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| ||||| || || ||| | || || ||||||||||| | ||| |||||| Sbjct 382 AATGCAGATTTTCGTGAAGACTCTGACCGGAAAAACCATTACTCTTGAAGTCGAGGCTTC 441 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || ||| | || || || || ||| ||||||||||| | || ||||| Sbjct 442 CGACACCATCGATAATGTCAAGCAGAAAATTCAGGATAAAGAAGGGATTCCTCCTGATCA 501 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| | ||||| | || ||||| || ||||||| | | || | |||||||| Sbjct 502 GCAACGTCTTATCTTCGCTGGTAAGCAATTGGAGGATGGCCGTACCCTCAGTGACTACAA 561 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || ||||| || ||||| |||||| |||| ||||| || |||| || Sbjct 562 TATCCAAAAAGAATCTACTTTGCACTTGGTCCTGAGACTGAGAGGTGG 609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398292766957771