Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq114236 136 4e-27 seq1613 127 2e-24 seq114234 122 8e-23 >seq114236 Length=889 Score = 136 bits (150), Expect = 4e-27 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||||| || | || ||| || || | ||||| |||||||| |||||||| ||||| Sbjct 364 CCTCCTCTCAATCTCAGAACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTN 423 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| |||||| | ||| || || ||| |||| ||||| |||||||||||||| Sbjct 424 AGAGTGCGGCCGTCTTCCAATTGCTTGCCGGCAAAGATGAGACGCTGCTGATCGGGAGGA 483 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 |||||||| ||||| ||||| || || | | || | ||||||| | || ||| Sbjct 484 ATGCCTTCCTTGTCCTGGATTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACT 543 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | || ||||| ||||| || || ||||| |||||||| Sbjct 544 TCGAGGGTAATAGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 590 Score = 109 bits (120), Expect = 5e-19 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || ||||| || || |||||||| ||||| | |||| |||||| | || ||||| Sbjct 166 GTCGATTCCTTCTGGATGTTGTAGTCGCTNAGGGTGCGGCCGTCTTCCAACTGCTTACCG 225 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || |||| |||||||| ||||| ||||| ||||||||||| || ||| || |||| Sbjct 226 GCGAAGATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTATCTTGAATCTTCGATTTT 285 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | ||| | ||||| | | || || || | ||| | || || |||||||| || Sbjct 286 ACATTTTCGATGGTGTCAGAAGCCTCGACCTCCANAGTGATAGTTTTACCGGTCAAAGTC 345 Query 137395 TTTACGAATATTTGCATAGCT 137415 || || || ||||||||| || Sbjct 346 TTGACNAAGATTTGCATACCT 366 Score = 105 bits (116), Expect = 7e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || ||||| || || |||||||| ||||| | |||| |||||| | || ||||| Sbjct 622 GTCGATTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGGCCGTCTTCCAACTGCTTACCG 681 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || |||| |||||||| ||||| ||||| ||||||||||| || ||| || |||| Sbjct 682 GCGAAGATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTATCTTGAATCTTCGATTTT 741 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | ||| | ||||| | | || || || | ||| | || || |||||||| || Sbjct 742 ACATTTTCGATGGTGTCAGAAGCCTCGACCTCCAAAGTGATAGTTTTACCGGTCAAAGTC 801 Query 137395 TTTACGAATATTTGCATAGCT 137415 || || || ||||||||| || Sbjct 802 TTGACAAAGATTTGCATACCT 822 Score = 82.4 bits (90), Expect = 7e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 137279 AGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCT 137338 |||| ||||| |||||||||||||| |||||||| ||||| ||||| || || | | Sbjct 2 AGATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTCACAT 61 Query 137339 GTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTA 137398 || | ||||||| | || ||||| | || | || || |||||||| || || | Sbjct 62 TATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTACCGGTCAAAGTCTTGA 121 Query 137399 CGAATATTTGCAT 137411 |||| |||||||| Sbjct 122 CGAAGATTTGCAT 134 >seq1613 Length=19885 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 || || ||||| | ||| | || | ||||| |||||||||||||| |||||||| ||| Sbjct 840 TGCCCGCCTCGGAGACGAAGTACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAGTCG 781 Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301 || | || | ||||| || || || || || |||| ||||| |||||||| ||| Sbjct 780 CTAAGCGTACGGCCATCTTCCAGCTGCTTGCCGGCGAAGATTAGACGCTGCTGATCTGGA 721 Query 137302 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCT 137361 || |||||||| ||||| || || || || | | || | ||||| | || ||| Sbjct 720 GGAATGCCTTCCTTGTCTTGGATCTTCTGCTTGACGTTATCGATGGTGTCCGAGGCTTCG 661 Query 137362 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || |||| || | |||||| || || | ||||||||||| |||||||| Sbjct 660 ACCTCAAGCGTGATCGTCTTTCCTGTGAGGGTTTTTACGAAGATTTGCAT 611 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 |||||||||||||| || ||||| || || | || | || || | ||| |||||| Sbjct 579 GTAGATTCTTTTTGGATATTGTAGTCACTGAGGGTACGGCCATCCTCCAATTGCTTACCA 520 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || |||| |||||||||||||| ||||| || |||||||| || |||||| || || Sbjct 519 GCGAAGATAAGACGTTGCTGATCAGGAGGAATCCCTTCTTTATCCTGAATTTTCTGCTTG 460 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | | || ||||||| ||| | || || ||||||| || Sbjct 459 ACATTATCGATGGTGTCGGAAGCCTCGACTTCAAGAGTAATGGTTTTTCCGGTCAGAGTC 400 Query 137395 TTTACGAATATTTGCAT 137411 || ||||| || ||||| Sbjct 399 TTCACGAAAATCTGCAT 383 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 137194 AAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTC 137253 || ||||| || || || | || ||||| ||||| |||||||| ||||| | |||| Sbjct 372 AATCGCAAGACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGG 313 Query 137254 GAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 137313 ||||| | ||| || ||||| |||| ||||| || ||||||||||| || ||||| Sbjct 312 CCATCTTCCAATTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGGATACCTTCC 253 Query 137314 TTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTC 137373 ||||| ||||| || || | | || | ||||| | | || || || | ||| Sbjct 252 TTGTCCTGGATTTTCTGCTTGACATTATCGATGGTGTCAGAAGCCTCAACCTCCAGAGTG 193 Query 137374 ACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 | || || ||||| | || || || || ||||||||| Sbjct 192 ATGGTTTTACCGGTAAGAGTCTTGACAAAGATTTGCATA 154 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| || || | ||| || || | || ||||| || || |||||||| ||||| Sbjct 153 CCACCTCTCAATCGTAGAACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGCTG 94 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| || || | ||| || ||||| |||| ||||| |||||||||||||| Sbjct 93 AGGGTGCGGCCATCCTCCAATTGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGGA 34 Query 137305 ATGCCTTCTTTGTC 137318 |||||||| ||||| Sbjct 33 ATGCCTTCCTTGTC 20 >seq114234 Length=910 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 ||||| |||||||| |||||||| ||||| | |||| ||||| | ||| || || Sbjct 724 GTAGACTCTTTTTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCTTCCAATTGCTTGCCG 665 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| |||||||||| || ||||||||||| ||||||||||| || ||| || || || Sbjct 664 GCAAAGATCAGACGCTGTTGATCGGGAGGAATGCCTTCTTTATCTTGAATCTTCTGCTTG 605 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | | || || || | ||| | || ||||| ||||| ||| Sbjct 604 ACATTATCAATGGTGTCAGAAGCCTCGACCTCCAAAGTAATGGTTTTGCCTGTCAAAGTT 545 Query 137395 TTTACGAATATTTGCAT 137411 || ||||| |||||||| Sbjct 544 TTCACGAAGATTTGCAT 528 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 ||||| |||||||| |||||||| ||||| | |||| |||||| | ||| || || Sbjct 268 GTAGACTCTTTTTGGATGTTGTAGTCGCTGAGAGTGCGGCCGTCTTCCAATTGCTTGCCG 209 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || |||| ||||| || ||||||||||| ||||||||||| || ||| || || || Sbjct 208 GCGAAGATGAGACGCTGTTGATCGGGAGGAATGCCTTCTTTATCTTGAATCTTCTGCTTG 149 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | | || || || | ||| | || ||||| ||||| ||| Sbjct 148 ACATTATCAATGGTGTCAGAAGCCTCGACCTCCAAAGTAATGGTTTTGCCTGTCAAAGTT 89 Query 137395 TTTACGAATATTTGCAT 137411 || ||||| |||||||| Sbjct 88 TTGACGAAGATTTGCAT 72 Score = 109 bits (120), Expect = 5e-19 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || || || || |||||||| ||||| | || | ||| || | ||| || || Sbjct 496 GTNGANTCNTTNTGGATGTTGTAGTCGCTGAGNGTNCGGCCGTCNTCCAATTGCTTGCCN 437 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || |||| ||||| |||||||||||||| |||||||||||||| |||| || || Sbjct 436 GCNAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCTTTGTCCTGGNTTTTCTGCTTC 377 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||||| | || ||||| | || | || || |||||||| || Sbjct 376 ACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTACCGGTCAAAGTN 317 Query 137395 TTTACGAATATTTGCAT 137411 || ||||| |||||||| Sbjct 316 TTGACGAAGATTTGCAT 300 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 || || | ||| || ||||| |||| ||||| |||||||||||||| ||||| || ||| Sbjct 910 TCCTCCAATTGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGGAATGCCCTCCTTG 851 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || ||||| || || | | || | ||||||| | || ||||| | || | Sbjct 850 TCCTGGATTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATA 791 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || || |||||||| || || ||||| |||||||| Sbjct 790 GTTTTACCGGTCAAAGTCTTGACGAAGATTTGCAT 756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487810335154800