Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq116056 165 8e-36 seq3604 156 4e-33 seq114236 113 4e-20 seq1613 113 4e-20 >seq116056 Length=8111 Score = 165 bits (182), Expect = 8e-36 Identities = 489/739 (66%), Gaps = 19/739 (3%) Strand=Plus/Minus Query 148256 CTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAA 148315 |||||| || | ||| || ||||||| ||||| || ||| || | |||||| || | Sbjct 2632 CTGATTTACAATCTGGAATTCGCCGGACAGCACACGTCGCGTGTAAATGTTGCTAGTGTA 2573 Query 148316 CGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGC 148375 || |||| | || || || |||| || || || || | ||| || ||||| ||| Sbjct 2572 TGGCTCAATGGCTTCATTATTACCCAGTATTTGAGCAGTGGATGCTGTTGGCATCGGCGC 2513 Query 148376 TACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTC 148435 || |||||| || ||||| | ||| | ||||| || || |||| || |||||| || Sbjct 2512 TAACAGCAGAGAATTGCGTACTCCGTGCTTTTTGATCTTCTCTTTCAAAGACGCCCAATC 2453 Query 148436 CCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATG-CCGCGGCT-AGCG 148493 ||| | | || |||||| ||||| || ||||| | | || || |||| | | Sbjct 2452 CCACAAATCAGTGGGGGTCACGCCCCACAAATCATACTGTA-ATTGACCTTGGCTGATAG 2394 Query 148494 GGGCTGCCCTCGTACGAGCTG-TACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTC 148552 | | | ||||| || | || ||||| ||| | | |||| |||||||| ||| Sbjct 2393 GAGAT-CCCTCATA-GCTCTCATACGGACCGCTCTCTTCCGCAAGTTCGCAAGACGCTGT 2336 Query 148553 GAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCT 148612 | || || | ||||| |||||| |||| ||||||| | ||| ||| Sbjct 2335 CAAAGCCGCGAAATAAATGGTCTCGAATATTTCAACGTTGAGCTTCATGGCCTCGGGGCT 2276 Query 148613 TTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAAT 148672 ||| | ||||| |||| | | ||| ||||| || || || || || || | || || Sbjct 2275 GTCGAATGGCATTCGCAACATGATAAAGGCGTCCGCCAGTCCTTGCACTCCAATACCGAT 2216 Query 148673 GGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG--AGCGGATAGTGGTTGCGGTCG 148730 || ||||| | ||||| || | | | |||| | | || |||| |||| ||| Sbjct 2215 CGGACGGTGCCTCATGTTCGA-ATTC-CTCGCTTGAGGCACGGGGTAGTAGTTGATGTCA 2158 Query 148731 ATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCA---AAA 148787 ||||| |||| ||||| || || ||||| | | || | ||||| ||| Sbjct 2157 ATGATTTTGTTCAGATTCCGTGTGACGACCTTGCACA--CGTCGTA-CAATTTTTTGAAA 2101 Query 148788 TCGTACTTGTCATCTACGAT---GCATCGGTTCACGGCGATAGAGGCTAGATTGCACACG 148844 || ||||| |||| | | | ||||| || ||||| || || ||||| |||||| Sbjct 2100 TCATACTTTCCATCGTTGGTTACGTATCGGGGCAATGCGATCGAAGCGAGATTACACACG 2041 Query 148845 GCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATC 148904 ||| ||| ||| | | |||| ||||| ||||| | ||| ||||| || ||||||| Sbjct 2040 GCCACCTCGTCCTTGCTGGTGTATTCTACAATCTCAGTGCAGAGATTTGAGCTTTTGATC 1981 Query 148905 ACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGT 148964 ||||| | |||||||| || ||||||| ||||| ||||| ||||||||||| Sbjct 1980 GTGCCCAGATCTTTTTGATTTGATTTTTTGTTGCAAGCGTCTTTGTAGAGCATGTACGGC 1921 Query 148965 CCGCCAGTTTCCACCTGCG 148983 || ||||| | ||||| Sbjct 1920 GTACCGGTTTCGATCTGCG 1902 >seq3604 Length=7407 Score = 156 bits (172), Expect = 4e-33 Identities = 489/743 (66%), Gaps = 17/743 (2%) Strand=Plus/Minus Query 148251 AGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTC 148310 |||| |||||| || | ||| || ||||||| ||||| || ||| || | |||||| Sbjct 5071 AGATGCTGATTTACAATCTGGAATTCGCCGGACAGCACACGACGCGTGTAAATGTTGCTG 5012 Query 148311 GTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATG 148370 || | || |||| | || || || |||| || || || || | ||| || ||||| Sbjct 5011 GTGTATGGCTCAATGGCTTCATTATTACCCAGTATTTGAGCAGTGGATGCTGTTGGCATC 4952 Query 148371 TACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCC 148430 ||||| |||||| || || || | ||| | ||||| || || |||| || |||| Sbjct 4951 GGCGCTAACAGCAGAGAATTACGTACTCCGTGCTTTTTGATCTTCTCTTTCAAAGACGCC 4892 Query 148431 CAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATG-CCGCGGCT 148489 || ||||| | | || |||||| ||||| || ||||| | | || || |||| Sbjct 4891 CAATCCCACAAATCAGTGGGGGTCACGCCCCACAAATCATACTGTA-ATTGACCTTGGCT 4833 Query 148490 AGCGGGGCTGCCCTCGTACGAGCTG-TACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCG 148548 | || ||||| || | || ||||| ||| | | |||| |||||||| || Sbjct 4832 GACAGGAGATCCCTCATA-GCTCTCATACGGACCGCTCTCTTCCGCAAGTTCGCAAGACG 4774 Query 148549 CCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACT 148608 | | || || | ||||| |||||| |||| ||||||| | ||| Sbjct 4773 CTGTCAAAGCCGCGAAATAAATGGTCTCGAATATTTCAACGTTGAGCTTCATGGCCTCGG 4714 Query 148609 CGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGC 148668 ||| || ||||||| |||| | | ||| ||||| || || || || || || | | Sbjct 4713 GGCTGTCAAACGGCATTCGCAACATGATAAAGGCGTCCGCGAGCCCTTGCACTCCAATAC 4654 Query 148669 CAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG--AGCGGATAGTGGTTGCG 148726 | || || ||||| | ||||| || | | | |||| | | || |||| |||| Sbjct 4653 CGATTGGACGGTGCCTCATGTTCGA-ATTC-CTCGCTTGAGGTACAGGGTAGTAGTTGAT 4596 Query 148727 GTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCA-- 148784 ||| ||||| |||| ||||| || || ||||| | | || | ||||| Sbjct 4595 GTCAATGATTTTGTTCAGATTCCGTGTGACTACCTTGCACA--CGTCGTA-CAATTTTTT 4539 Query 148785 -AAATCGTACTTGTCATC-TACGATGCAT--CGGTTCACGGCGATAGAGGCTAGATTGCA 148840 ||||| ||||| | || | | | ||| ||| || ||||| || || ||||| || Sbjct 4538 GAAATCATACTTTCCGTCGTTGGTTACATAACGGGGCAATGCGATCGAAGCGAGATTACA 4479 Query 148841 CACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTT 148900 |||||| ||| ||| | | |||| ||||| ||||| | ||| ||||| || ||| Sbjct 4478 TACGGCCACCTCGTCCTTGCTGGTGTATTCTACAATCTCAGTGCAGAGATTCGAGCTTTT 4419 Query 148901 GATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTA 148960 |||| ||||| || || ||||| || ||||||| ||||| ||||| |||||||| Sbjct 4418 GATCGTGCCCAGATTTTTCTGATTTGATTTTTTGTTGCAAGCGTCTTTGTAGAGCATGTA 4359 Query 148961 CGGTCCGCCAGTTTCCACCTGCG 148983 ||| || ||||| | ||||| Sbjct 4358 CGGCGTACCGGTTTCGATCTGCG 4336 >seq114236 Length=889 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || |||||||| || || ||||| |||| | ||| ||| || | |||||||| Sbjct 394 GTAGACTCTTTTTGGATGTTGTAGTCGCTNAGAGTGCGGCCGTCTTCCAATTGCTTGCCG 453 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | ||||| |||||||| |||||||| |||||||||||||| ||| || ||||| Sbjct 454 GCAAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTC 513 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||| | | ||| || |||| ||| | |||||||| |||| ||| Sbjct 514 ACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTGCCTGTCAAAGTC 573 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 574 TTGACGAAGATTTGCAT 590 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 133530 ATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGC 133589 ||||| |||||||| |||||||| |||||||||||||| ||| || ||||| | | Sbjct 4 ATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTCACATTA 63 Query 133590 TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACG 133649 || | ||||| | | ||| || |||| ||| | ||||| ||||||| ||| || ||| Sbjct 64 TCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTACCGGTCAAAGTCTTGACG 123 Query 133650 AAAATCTGCAT 133660 || || ||||| Sbjct 124 AAGATTTGCAT 134 >seq1613 Length=19885 Score = 113 bits (124), Expect = 4e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || ||||| || || ||||| |||| | ||| | | | || || ||||||||||| Sbjct 807 GTAGATTCTTTTTGAATGTTGTAGTCGCTAAGCGTACGGCCA-TCTTCCAGCTGCTTGCC 749 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||| || ||||| |||||||||||||| |||||| ||||| Sbjct 748 GGCGAAGATTAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATCTTCTGCTT 689 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | || || || || | |||| || || || || || || Sbjct 688 GACGTTATCGATGGTGTCCGAGGCTTCGACCTCAAGCGTGATCGTCTTTCCTGTGAGGGT 629 Query 133643 TTTTACGAAAATCTGCATG 133661 ||||||||| || |||||| Sbjct 628 TTTTACGAAGATTTGCATG 610 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || || || || ||||| |||| | ||| | | | || || | |||||||| Sbjct 351 GTCGATTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGGCCA-TCTTCCAATTGCTTGCC 293 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||| || ||||||||||| ||||||||||| ||| || ||||| Sbjct 292 AGCGAAGATGAGACGCTGTTGATCGGGAGGGATACCTTCCTTGTCCTGGATTTTCTGCTT 233 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | | ||| || || | |||| |||||| ||||| ||||| Sbjct 232 GACATTATCGATGGTGTCAGAAGCCTCAACCTCCAGAGTGATGGTTTTACCGGTAAGAGT 173 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 172 CTTGACAAAGATTTGCAT 155 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || ||||| || |||||||| || | | || | | | ||||| | ||||| || Sbjct 579 GTAGATTCTTTTTGGATATTGTAGTCACTGAGGGTACGGCCA-TCCTCCAATTGCTTACC 521 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || || ||||| || ||||| || ||||| || || || || ||||| Sbjct 520 AGCGAAGATAAGACGTTGCTGATCAGGAGGAATCCCTTCTTTATCCTGAATTTTCTGCTT 461 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| | ||| || || | || | |||||| ||||||||||| Sbjct 460 GACATTATCGATGGTGTCGGAAGCCTCGACTTCAAGAGTAATGGTTTTTCCGGTCAGAGT 401 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 400 CTTCACGAAAATCTGCAT 383 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| || ||||| |||| | ||| | | | ||||| | |||||||| Sbjct 123 GTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCA-TCCTCCAATTGCTTGCC 65 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| |||||||| |||||||| |||||||||||||| ||| || ||||| Sbjct 64 AGCGAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATTTTCTGCTT 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482694828856360