Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq114234 123 6e-23 seq114236 122 2e-22 seq1613 120 7e-22 >seq114234 Length=910 Score = 123 bits (136), Expect = 6e-23 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | ||||| ||||| || |||||||| || || ||||||||| | || Sbjct 86 CAAAACTTTGACAGGCAAAACCATTACTTTGGAGGTCGAGGCTTCTGACACCATTGATAA 145 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||||||||||| |||||||| ||| || || || | || ||||| Sbjct 146 TGTCAAGCAGAAGATTCAAGATAAAGAAGGCATTCCTCCCGATCAACAGCGTCTCATCTT 205 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| ||||| |||||||| || | ||| | ||| |||||| |||| |||||||| Sbjct 206 CGCCGGCAAGCAATTGGAAGACGGCCGCACTCTCAGCGACTACAACATCCAAAAAGAGTC 265 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 |||| | ||| | || | ||| Sbjct 266 TACTTTGCACTTGGTNCTNAGA 287 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | ||||| ||||| || |||||||| || || ||||||||| | || Sbjct 543 AAAACTTTGACAGGCAAAACCATTACTTTGGAGGTCGAGGCTTCTGACACCATTGATAAT 602 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||||| ||||||||||| |||||||| ||| || || || | || ||||| Sbjct 603 GTCAAGCAGAAGATTCAAGATAAAGAAGGCATTCCTCCCGATCAACAGCGTCTGATCTTT 662 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| ||||| ||||||||||| | ||| | ||| |||||| |||| ||||||||| Sbjct 663 GCCGGCAAGCAATTGGAAGATGGCCGCACTCTCAGCGACTACAACATCCAAAAAGAGTCT 722 Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387 ||| | ||| | || | ||||| Sbjct 723 ACTTTGCACTTGGTCCTCAGACT 745 >seq114236 Length=889 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || | || || ||||| ||||||||||| || || ||||||| Sbjct 815 CAAATCTTTGTCAAGACTTTGACCGGTAAAACTATCACTTTGGAGGTCGAGGCTTCTGAC 756 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| ||||| ||||||||||| |||||||| ||| || || ||| Sbjct 755 ACCATCGAAAATGTAAAATCGAAGATTCAAGATAAAGAAGGCATTCCTCCAGATCAACAA 696 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||||||||| |||||||||||||| || | || | ||| |||||| || Sbjct 695 CGTCTTATCTTCGCCGGTAAGCAGTTGGAAGACGGCCGCACCCTAAGCGACTACAACATC 636 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 ||||| || || ||| | ||| | || | ||||| Sbjct 635 CAGAAGGAATCGACTTTGCACTTGGTCCTCAGACT 601 Score = 118 bits (130), Expect = 3e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || ||||| |||||| |||| || || ||||||||| ||||| ||||| Sbjct 338 ACCGGTAAAACTATCACTNTGGAGGTCGAGGCTTCTGACACCATCGAAAATGTAAAATCG 279 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| |||||||| ||| || || ||| | |||||||||||||| ||| Sbjct 278 AAGATTCAAGATAAAGAAGGCATTCCTCCAGATCAACAACGTCTTATCTTCGCCGGTAAG 219 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||||||||||| || | || | ||| |||||| ||||||| || || ||| | ||| Sbjct 218 CAGTTGGAAGACGGCCGCACCCTNAGCGACTACAACATCCAGAAGGAATCGACTTTGCAC 159 Query 206374 CTTGTTTTGAGACT 206387 | || | ||||| Sbjct 158 TTGGTCCTCAGACT 145 Score = 95.1 bits (104), Expect = 3e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| ||||| || || | ||||| || ||| ||||| |||| || ||||| Sbjct 566 ACAGGCAAAACTATTACCCTCGAAGTCGAGGCTTCAGACACTATCGATAATGTGAAGCAG 507 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 || || || || || ||||| ||| || || || | || ||||| ||||| ||| Sbjct 506 AAAATCCAGGACAAGGAAGGCATTCCTCCCGATCAGCAGCGTCTCATCTTTGCCGGCAAG 447 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||| || | ||| | ||| |||||| |||| |||||||||||| | ||| Sbjct 446 CAATTGGAAGACGGCCGCACTCTNAGCGACTACAACATCCAAAAAGAGTCTACTTTGCAC 387 Query 206374 CTTGTTTTGAGA 206385 | ||| ||||| Sbjct 386 TTGGTTCTGAGA 375 >seq1613 Length=19885 Score = 120 bits (132), Expect = 7e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||||||||| |||||||| | || || ||| || ||||| |||| Sbjct 626 AAAACCCTCACAGGAAAGACGATCACGCTTGAGGTCGAAGCCTCGGACACCATCGATAAC 685 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||||| ||||| ||||| || ||||| ||| || || || | || |||||| Sbjct 686 GTCAAGCAGAAGATCCAAGACAAGGAAGGCATTCCTCCAGATCAGCAGCGTCTAATCTTC 745 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| |||||||||| | || | ||| |||||| | || ||||| ||| Sbjct 746 GCCGGCAAGCAGCTGGAAGATGGCCGTACGCTTAGCGACTACAACATTCAAAAAGAATCT 805 Query 206365 ACTCTTCACCTTGT 206378 |||||||| ||||| Sbjct 806 ACTCTTCATCTTGT 819 Score = 100 bits (110), Expect = 7e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || |||||||| || ||| | ||||| || ||| ||||| |||| Sbjct 398 AAGACTCTGACCGGAAAAACCATTACTCTTGAAGTCGAGGCTTCCGACACCATCGATAAT 457 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||||| || ||||| || |||||||| ||| || || ||| | ||||||||| Sbjct 458 GTCAAGCAGAAAATTCAGGATAAAGAAGGGATTCCTCCTGATCAGCAACGTCTTATCTTC 517 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||| ||||| | || | || ||||| |||| ||||| ||| Sbjct 518 GCTGGTAAGCAATTGGAGGATGGCCGTACCCTCAGTGACTACAATATCCAAAAAGAATCT 577 Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387 ||| | ||| | || ||||||| Sbjct 578 ACTTTGCACTTGGTCCTGAGACT 600 Score = 87.8 bits (96), Expect = 4e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || || || || ||||| |||||| |||| || || ||||||| Sbjct 158 CAAATCTTTGTCAAGACTCTTACCGGTAAAACCATCACTCTGGAGGTTGAGGCTTCTGAC 217 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||||| || || || || || ||||| || || || || Sbjct 218 ACCATCGATAATGTCAAGCAGAAAATCCAGGACAAGGAAGGTATCCCTCCCGATCAACAG 277 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| || ||||| ||||||||||| | || | ||| |||||| || Sbjct 278 CGTCTCATCTTCGCTGGCAAGCAATTGGAAGATGGCCGCACCCTCAGCGACTACAACATC 337 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || || || ||| | ||| | || ||| || Sbjct 338 CAAAAGGAATCGACTTTGCACTTGGTCTTGCGA 370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180001645771019