Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq8437 86.0 6e-12 >seq8437 Length=12918 Score = 86.0 bits (94), Expect = 6e-12 Identities = 170/252 (67%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 31154 CTTCGATGTGATTGACATAAATATGCGCATCGCCAATAGAGTGTACCAATTCCCCTGGTC 31213 |||| | |||||| |||| ||| ||||| ||||||| ||||| || || || ||| Sbjct 5699 CTTCAACGTGATTCGTGTAAACATGAGCATCACCAATAGTATGTACGAAGTCACCGGGTT 5758 Query 31214 TTAGATGGGTCAATTTGGCAATCACATGAACCAAAAGCGCATAACTCGCTATGTTGAATG 31273 | | || || | | ||||||| || | | | ||| || || || ||||| | Sbjct 5759 TCAAATTCGTAACATGAGCAATCATATACGTGAGTAAGGAATAGCTGGCGATATTGAACG 5818 Query 31274 GTACACCCAATCCCAAATCGGCAGATCGTTGATATAACAAACAGGAAAGTTCATCTCCGG 31333 | | || || |||| || |||||||||||||| | | ||| || || || | | | Sbjct 5819 GGATGCCTAAGCCCATGTCTGCAGATCGTTGATAAAGCTGACAAGACAGCTCTCCATCAG 5878 Query 31334 TCACGTAAAATTGAAATAACACATGACAAGGCGGCAAAGCCATTTCACAGGTATCGACGG 31393 || |||||||| ||| ||||||| || || || ||||||| | | |||| || Sbjct 5879 AAACATAAAATTGGCATAGAGCATGACACGGGGGTAATGCCATTTGAGGGATATCCTTGG 5938 Query 31394 GATTCCAAGCGC 31405 |||||| |||| Sbjct 5939 CATTCCATGCGC 5950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512247182231920