Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq3604 174 1e-38 seq116056 159 3e-34 seq114236 136 3e-27 seq114234 129 5e-25 seq1613 127 2e-24 >seq3604 Length=7407 Score = 174 bits (192), Expect = 1e-38 Identities = 295/424 (70%), Gaps = 9/424 (2%) Strand=Plus/Minus Query 131613 TGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCA 131672 |||| || | ||||||||| | || || |||||| || ||||||||||||||||| | Sbjct 4209 TGGGGCAAAATAGCGACCAATCTCCATTGCTTTCAACCCGTTTCATAAACAAATCCGGTA 4150 Query 131673 CCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCA 131732 ||| | |||||| || || || | |||| || ||| ||| | || | | |||||| Sbjct 4149 TCCACATCGCGTAGAAAAGGTCCCGAGCTCTTGACTCATCTTTGCCGGTGTTCTTTTTCG 4090 Query 131733 AATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGC----- 131787 | ||||||||| || | ||||||||||| ||||| | ||||| || | ||| Sbjct 4089 CGTCTAAAAAGTCAAAGACATCCGCATGCCACGGTTCGAGGTACACCGCAAATGCACCTG 4030 Query 131788 GCCTTTGCGCTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACAT 131847 |||||| ||||||||||| | || | ||| || |||||||||| || |||| ||| Sbjct 4029 GCCTTT--TATTACCGCCTTGGTCTACGTAACGTGCCGTGTTGTTGTAAACACGCAGCAT 3972 Query 131848 GGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGAT 131907 ||| | |||||| | |||||| || |||| || || ||||| | ||||| || Sbjct 3971 AGGCAAGAGACCGTTCGAGTTTCCGTTAGTGCCTGCGATATAACTGCCGCTAGCTCTAAT 3912 Query 131908 TTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTA 131966 ||| || | | | |||||| || || || || ||| ||||| || ||||| | ||| Sbjct 3911 GTTGGAAATGCTCAATCCAATCCCGCCAGCAGT-TTTGGAGATAAGAGCGCACTGCTTTA 3853 Query 131967 GAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACA 132026 || | ||||| || || | |||||| | || | | |||||||||| ||| | Sbjct 3852 AGGTTTCGTAGATGCCATCGATGCTGTCATCTTGCATCGCCAATAAAAAGCAACTGGATA 3793 Query 132027 ACTG 132030 | || Sbjct 3792 ATTG 3789 >seq116056 Length=8111 Score = 159 bits (176), Expect = 3e-34 Identities = 292/424 (69%), Gaps = 9/424 (2%) Strand=Plus/Minus Query 131613 TGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCA 131672 |||| || | ||||||||| | || || |||||| || ||||||||||||||||| | Sbjct 1775 TGGGGCAAAATAGCGACCAATCCCCATTGCTTTCAACCCGTTTCATAAACAAATCCGGTA 1716 Query 131673 CCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCA 131732 ||| | |||||| || || || | || || || ||| | ||| | | |||||| Sbjct 1715 TCCACATCGCGTAGAAAAGGTCCCGTGCCCTTGATTCATCTTTGCCCGTGTTCTTTTTCG 1656 Query 131733 AATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGC----- 131787 | ||||||||| || | ||||||||||| || || | ||||| || | ||| Sbjct 1655 CGTCTAAAAAGTCAAAGACATCCGCATGCCACGGCTCGAGGTACACCGCGAATGCACCTG 1596 Query 131788 GCCTTTGCGCTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACAT 131847 |||||| ||||||||||| | || | ||| | |||| || || || |||| ||| Sbjct 1595 GCCTTT--TATTACCGCCTTGGTCTACGTAACGTGCTGTGTTATTATAAACACGCAGCAT 1538 Query 131848 GGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGAT 131907 |||| | |||||||| |||||| ||||||| || || ||||| | ||||| || Sbjct 1537 GGGCAAGAGACCGTTGGAGTTTCCGTTGGTGCCTGCGATATAACTGCCGCTAGCTCTAAT 1478 Query 131908 TTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTA 131966 ||| || | | | |||||| || || || || ||| ||||| || ||||| | ||| Sbjct 1477 GTTGGAAATGCTCAATCCAATCCCGCCAGCAGT-TTTGGAGATAAGAGCGCACTGCTTTA 1419 Query 131967 GAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACA 132026 || | ||||| || || | |||||| | || | | |||||||||| ||| | Sbjct 1418 AGGTTTCGTAGATGCCATCGATGCTGTCATCTTGCATCGCCAATAAAAAGCAACTGGATA 1359 Query 132027 ACTG 132030 | || Sbjct 1358 ATTG 1355 >seq114236 Length=889 Score = 136 bits (150), Expect = 3e-27 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||| | || ||||| || || ||||| |||||||| || ||||||||||| Sbjct 364 CCTCCTCTCAATCTCAGAACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTN 423 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| ||||||| | || || ||||| | ||||||||||| ||||| || || Sbjct 424 AGAGTGCGGCCGTCTTCCAATTGCTTGCCGGCAAAGATGAGACGCTGCTGATCGGGAGGA 483 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || ||| || | |||| | || | |||||||| || || ||| Sbjct 484 ATGCCTTCCTTGTCCTGGATTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACT 543 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || |||| |||||| |||| ||| || || ||||||||||| Sbjct 544 TCGAGGGTAATAGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 590 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || || || || || || || || ||||||||||| | | |||| ||||||| Sbjct 610 ACCAAGTGCAAAGTCGATTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGGCCGTCTTCC 669 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | ||| ||||||||| | || ||||| |||||||| || || | || |||||||| Sbjct 670 AACTGCTTACCGGCGAAGATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTATCTTGA 729 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| ||| | |||| | ||||| | || || || || | ||| |||| ||| Sbjct 730 ATCTTCGATTTTACATTTTCGATGGTGTCAGAAGCCTCGACCTCCAAAGTGATAGTTTTA 789 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 || |||| ||| || ||||||||||||||| || || Sbjct 790 CCGGTCAAAGTCTTGACAAAGATTTGCATACCTCCT 825 Score = 127 bits (140), Expect = 2e-24 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || || || || || || || || ||||||||||| | | |||| ||||||| Sbjct 154 ACCAAGTGCAAAGTCGATTCCTTCTGGATGTTGTAGTCGCTNAGGGTGCGGCCGTCTTCC 213 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | ||| ||||||||| | || ||||| |||||||| || || | || |||||||| Sbjct 214 AACTGCTTACCGGCGAAGATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTATCTTGA 273 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| ||| | |||| | ||||| | || || || || | ||| |||| ||| Sbjct 274 ATCTTCGATTTTACATTTTCGATGGTGTCAGAAGCCTCGACCTCCANAGTGATAGTTTTA 333 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 || |||| ||| || || |||||||||||| || || Sbjct 334 CCGGTCAAAGTCTTGACNAAGATTTGCATACCTCCT 369 >seq114234 Length=910 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || || ||||| |||||||| || ||||||||||| | |||| ||||||| Sbjct 280 ACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTGAGAGTGCGGCCGTCTTCC 221 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | || || |||||| | ||||||||||||||||| || || | || |||||||| Sbjct 220 AATTGCTTGCCGGCGAAGATGAGACGCTGTTGATCGGGAGGAATGCCTTCTTTATCTTGA 161 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | || | | || | ||||| | || || || || | ||| || | |||| Sbjct 160 ATCTTCTGCTTGACATTATCAATGGTGTCAGAAGCCTCGACCTCCAAAGTAATGGTTTTG 101 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||| |||||| || ||||||||||| Sbjct 100 CCTGTCAAAGTTTTGACGAAGATTTGCAT 72 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || || ||||| |||||||| || ||||||||||| | |||| | ||||| Sbjct 736 ACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCTTCC 677 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | || || ||||| | || |||||||||||||| || || | || |||||||| Sbjct 676 AATTGCTTGCCGGCAAAGATCAGACGCTGTTGATCGGGAGGAATGCCTTCTTTATCTTGA 617 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | || | | || | ||||| | || || || || | ||| || | |||| Sbjct 616 ATCTTCTGCTTGACATTATCAATGGTGTCAGAAGCCTCGACCTCCAAAGTAATGGTTTTG 557 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||| ||||||||| ||||||||||| Sbjct 556 CCTGTCAAAGTTTTCACGAAGATTTGCAT 528 Score = 107 bits (118), Expect = 2e-18 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || || || || || || || || ||||||||||| | | || |||| || Sbjct 508 ACCAAGTGCAAAGTNGANTCNTTNTGGATGTTGTAGTCGCTGAGNGTNCGGCCGTCNTCC 449 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | || || || || | ||||||||||| ||||| || || | || ||||| || | Sbjct 448 AATTGCTTGCCNGCNAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCTTTGTCCTGG 389 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 | || | |||| | || | |||||||| || || ||||| || || |||| ||| Sbjct 388 NTTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTA 329 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||| ||| || || ||||||||||| Sbjct 328 CCGGTCAAAGTNTTGACGAAGATTTGCAT 300 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 27102 TGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATC 27161 || || || ||| | ||||||||||| ||||| || || | ||||| || || ||| Sbjct 901 TGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCCTGGATT 842 Query 27162 TTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCC 27221 || | |||| | || | |||||||| || || ||||| || || |||| ||| || Sbjct 841 TTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTACCG 782 Query 27222 GTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| ||| || || ||||||||||| Sbjct 781 GTCAAAGTCTTGACGAAGATTTGCAT 756 >seq1613 Length=19885 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||| ||||| ||||| || || || || || ||||| || ||||||||||| Sbjct 381 CCACCCCTCAATCGCAAGACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCGCTG 322 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | ||||| | || || || ||| | ||||||||||||||||| || || Sbjct 321 AGGGTGCGGCCATCTTCCAATTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGG 262 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| || || || ||| || | || | | || | ||||| | || ||||| Sbjct 261 ATACCTTCCTTGTCCTGGATTTTCTGCTTGACATTATCGATGGTGTCAGAAGCCTCAACC 202 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| || | ||| || || ||||| || ||||||||||||||| Sbjct 201 TCCAGAGTGATGGTTTTACCGGTAAGAGTCTTGACAAAGATTTGCATA 154 Score = 116 bits (128), Expect = 3e-21 Identities = 167/234 (71%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 27015 TTATTGCCT-CCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTA 27073 |||||||| || || | || | ||| | ||| | ||||| ||||||||||| ||||| Sbjct 844 TTATTGCCCGCCTCGGAGACGAAGTACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTA 785 Query 27074 GTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATC 27133 |||||| | | || | ||||| ||||| || |||||| | || |||||||| ||||| Sbjct 784 GTCGCTAAGCGTACGGCCATCTTCCAGCTGCTTGCCGGCGAAGATTAGACGCTGCTGATC 725 Query 27134 CGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGC 27193 || || | || || || || |||||| | || | | | || | ||||| | ||| Sbjct 724 TGGAGGAATGCCTTCCTTGTCTTGGATCTTCTGCTTGACGTTATCGATGGTGTCCGAGGC 665 Query 27194 TTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| || || || || || | || || || || ||||| || ||||||||||| Sbjct 664 TTCGACCTCAAGCGTGATCGTCTTTCCTGTGAGGGTTTTTACGAAGATTTGCAT 611 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || || ||||| |||||||| ||||||||||| || | | | || | || || Sbjct 591 ACCAAGTGCAAAGTAGATTCTTTTTGGATATTGTAGTCACTGAGGGTACGGCCATCCTCC 532 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | || ||||| ||| | || ||||| || ||||| || || | || |||||||| Sbjct 531 AATTGCTTACCAGCGAAGATAAGACGTTGCTGATCAGGAGGAATCCCTTCTTTATCCTGA 472 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || | || | | || | ||||| | || || ||||| ||||| || | ||| Sbjct 471 ATTTTCTGCTTGACATTATCGATGGTGTCGGAAGCCTCGACTTCAAGAGTAATGGTTTTT 412 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||||||| ||||| || || ||||| Sbjct 411 CCGGTCAGAGTCTTCACGAAAATCTGCAT 383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424312213574568