Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq116056 203 4e-47 >seq116056 Length=8111 Score = 203 bits (224), Expect = 4e-47 Identities = 1131/1781 (64%), Gaps = 47/1781 (3%) Strand=Plus/Minus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 ||||||| |||| | ||| | ||| | ||| || || ||||||||||||||||| | Sbjct 2966 TGAACTGGATGGCTTGAGCCGCCGGCTTCGTTCGAAGATAATACATCCCCGTCTTGAGTC 2907 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924 | |||||| | || | |||||| || ||||||| | | | || | ||| Sbjct 2906 CGACCTTCCACCCGTAAAAATGCATGCTGGTCAACTTGCCGTAGTTAGGCTCGGCGATGT 2847 Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984 | ||||| |||||| ||| |||||| | || |||| || || ||||| | || | Sbjct 2846 GAATGTTCAAACTTTGACTTTGGTCGATGTACGGTGCCCGGTCGGCAGCCATTTTGATGA 2787 Query 117985 CATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATAT 118044 | |||| | || |||||||| || | || | ||||| ||||| || || || | Sbjct 2786 TGTTCTTCTGCGAAATCTCCCACACGGTACGATACAATTTCTTCATATCCTCAGGAATCT 2727 Query 118045 CCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCC---TTCATATCCTTTG 118101 ||| ||||| || || ||| || | ||||| | | || | ||| | Sbjct 2726 GAGGGATGTTTTGAATCGA---ACCGTTGTTAGCGATGAGCTGCAACTTTACATCATCGT 2670 Query 118102 ACCAGAGACCAATCTTTTTG--AGATCCTCCACGAGATGCTTATTGACAACAACAAACTC 118159 ||||| ||| ||||| || | |||| | | | ||| ||| |||| || || Sbjct 2669 TCCAGATACC--TCTTTCTGTCAAATCCATGAGTAAACGCTGATTTACAATCTGGAATTC 2612 Query 118160 ACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 118219 || | || |||| | || || ||| | ||||||||||||| | ||||| || Sbjct 2611 GCCGGACAGCACACGTCGCGTGTAAATGTTGCTAGTGTATGGCTCAATGGCTTCATTATT 2552 Query 118220 ACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 118279 ||||| ||||| || ||||| ||||| ||||| || || | || || || || | Sbjct 2551 ACCCAGTATTTGAGCAGTGGATGCTGTTGGCATCGGCGCTAACAGCAGAGAATTGCGTAC 2492 Query 118280 ACC---CTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGT--TGAGCTTTGTC 118334 || ||||| | || || || | || |||| || | | || | | Sbjct 2491 TCCGTGCTTTT---TGATCTTCTCTTTCAAAGACGCCCAATCCCACAAATCAG-TGGGGG 2436 Query 118335 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 118394 || | | ||||| |||| |||| | ||||||| || ||||||||| | || Sbjct 2435 TCACGCC-CCACAAATCATACTGTAATTGACCTTGGCTGATAGGAGATCCCTCATAGCTC 2377 Query 118395 TCATATGGGCC-CTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 118453 ||||| || || ||| | ||||| | |||| | ||| | || ||| ||| || Sbjct 2376 TCATACGGACCGCTCT-CTTCCGCAAGTTCGCAAGACGCTGTCAAAGCCGCGAAATAAAT 2318 Query 118454 TGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA 118513 || || || || | | || | | |||||||| | || || | | ||| | Sbjct 2317 GGTCTCGAATATTTCAACGTTGAGCTTCATGGCCTCGGGGCTGTCGAATGGCATTCGCAA 2258 Query 118514 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 118573 || ||||| | ||||| || ||||| || || | || || || || || ||||| || Sbjct 2257 CATGATAAAGGCGTCCGCCAGTCCTTGCACTCCAATACCGATCGGACGGTGCCTCATGTT 2198 Query 118574 AGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 118633 || |||| || |||||| || | || | || || | | || ||||| Sbjct 2197 CGAATTCCTCGCTTGAGGCACGGGGTAGTAGTTGATGTCAATGATTTTGTTCAGATTCCG 2138 Query 118634 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 118693 ||||| ||||| | || | | |||| | ||||| | | | | || | | Sbjct 2137 TGTGACGACCTTGCACACGTCGTACAATTTTTTGAAATCATACTTTCCA---TCGTTGGT 2081 Query 118694 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 118753 || || || | ||||| || || ||||||||||| | ||| ||||| || Sbjct 2080 TACGTATCGGGGCAATGCGATCGAAGCGAGATTACACACGGCCACCTCGTCCTTGCTGGT 2021 Query 118754 GTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 118813 ||| |||| ||| || ||||| | ||||| || || || ||||||| | |||||||| Sbjct 2020 GTATTCTACAATCTCAGTGCAGAGATTTGAGCTTTTGATCGTGCCCAGATCTTTTTGATT 1961 Query 118814 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873 ||| ||| |||| || || || ||||| |||||||| ||||| || || || | || || Sbjct 1960 TGATTTTTTGTTGCAAGCGTCTTTGTAGAGCATGTACGGCGTACCGGTTTCGATCTGCGA 1901 Query 118874 CTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTC 118933 || || || || | ||| | | ||| | || | |||| ||| ||| Sbjct 1900 CTCGATGATGGCGTACCATAGTTTTTGCGCTTTGATTGTCTTCCTCGCTCTCCCTGCTTT 1841 Query 118934 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC 118993 || ||||| |||||| |||||||| ||||| | || | ||| || Sbjct 1840 TTCATACTTCTCGTAGAGCTTATCAAACTCATCACCATATACGTCGACCAAACCTATCGC 1781 Query 118994 CTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 119053 | || ||||| || || ||||| | ||| |||||||| ||||| || | || Sbjct 1780 TTCATTGGGGCAAAATAGCGACCAATCCCCATTGCTTTCAACCCGTTTCATAAACAAATC 1721 Query 119054 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTC-ATCCCCCTGAT-TG 119111 || ||||| | ||| |||| || ||||| | | ||| || | ||| || | | Sbjct 1720 CGGTATCCACATCGCGTAGAAAAGGTCCCGTGCCCTTGATTCATCTTTGCCCGTGTTCTT 1661 Query 119112 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 119171 ||| || |||||||| | || |||||| |||||||| || ||||||||||||| | Sbjct 1660 TTTCGC--GTCTAAAAAGTCAAAGACATCCGCATGCCACGGCTCGAGGTACACCGCGAAT 1603 Query 119172 G-ACC---CCTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACG 119227 | ||| |||| | ||| | |||| ||| || | || ||| ||| | ||||| Sbjct 1602 GCACCTGGCCTT-TTATTACCGCCTTGGTCTACGTAACGTGCTGTGTTATTATAAACACG 1544 Query 119228 AAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTG 119285 ||||| || | || ||| | ||| | || || || || ||| ||| | | | Sbjct 1543 CAGCATGGGCAAGAGACCGTTGGAGTTTCCGTTGGTGCCTGCGATATAACTGCC--GCTA 1486 Query 119286 GCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 119345 ||||| | | | ||| || ||||| || || || || ||||| | |||||| Sbjct 1485 GCTCTAATGTTGGAAATGCTCAATCCAATCCCGCCAGCAGTTTTGGAGATAAGAGCGCAC 1426 Query 119346 TCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAG 119405 | | | | | ||||||| |||||||| |||| | | | || | | ||||| Sbjct 1425 TGCTTTAAGGTTTCGTAGATGCCATCGATGCTGTCATCTTGCATCGCCAATAAAAAGCAA 1366 Query 119406 CTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAAC 119465 || || | |||||| || || ||||||||||| ||||| |||| ||| ||| ||||| Sbjct 1365 CTGGATAATTGAGGTCTATTGGTGCCAGCGTTGAATAGAGTGGGTGACGCATGGGTGAAC 1306 Query 119466 ATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGA---ATGTCTTCCCCGTG 119521 || | | ||||| | |||||| | ||| | ||| || || | ||| || || Sbjct 1305 -CACTTCTCAGACATAAGATTGTAGGT-TTCAATA--GCGCGATCGATATTTTCGCCATG 1250 Query 119522 AATACCGATCGAGACCCGCATAAACATGTATTG-GGGTGTT 119561 || ||||| ||||| | ||| | ||||| ||| ||| ||| Sbjct 1249 GATGCCGATGGAGACTCTCATTAGCATGTGTTGCGGGCGTT 1209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617506472668840